Array 1 2002110-2007629 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017767.1 Methanobacterium sp. MZ-A1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 2002110 30 100.0 36 .............................. TCAGCATCCAAGCCACTGCCAGATCCGTCAACGGTT 2002176 30 100.0 39 .............................. CCAATACCCTTCTCAGACGTGACGATAAACAACCCCCTC 2002245 30 100.0 36 .............................. TTGTATGTTGCTGTATTTGAAGAAGATGTGCATCCT 2002311 30 100.0 38 .............................. GGGGTTGATAGTATTCCGGATTTATGTACGGTAAGCAA 2002379 30 100.0 36 .............................. TCTTCTTTTCCTCACATTTTCAGTAGCACCACCACC 2002445 30 100.0 37 .............................. TCCGGGGCCATCCTCCATCTGGTAGGCGTTCTATTGG 2002512 30 100.0 37 .............................. CCTTGTTCTTGTCTTCTTCTTCTCCATAATAACCTGT 2002579 30 100.0 38 .............................. AAAAAGTGGGAGAGAAATAGCCCAAAAGGCACATTCTC 2002647 30 100.0 38 .............................. ACCTTTGGAACCGCACCTATACTGGTGGATGTTGCAGG 2002715 30 100.0 36 .............................. ATTGGTATAGGGTAAACTGGTTATTTATGGTGGTCT 2002781 30 100.0 37 .............................. AAAAATTAGCAGAAGAAGTCGCAAGACAAAAAGAAGA 2002848 30 100.0 37 .............................. ACACTCCAGGGGCCAACATTTCCAAAGATGTCATCAA 2002915 30 100.0 38 .............................. TAGGTGAACTCTAACTCTCCACCCATCATACTGTACCG 2002983 30 100.0 37 .............................. TTGTGTAGTCACAATACAGTTTAAATCCTTTATCTTG 2003050 30 100.0 38 .............................. GGAAAAAGAGGTCTGTGTATTGTGTGTGTGCTTTGATA 2003118 30 100.0 37 .............................. CTCCTTCATCTGTTGAAACCATGATCGAGGTAGATCC 2003185 30 100.0 38 .............................. CCGGTGTAAATACAACGTACAGGTAAAGGGTCATCTAT 2003253 30 100.0 38 .............................. CGCCCACCATAGCCCCCAGGGGGTTTACCTATCGCCAT 2003321 30 100.0 39 .............................. GAATATTAAGATTGTTTGAAATTAAAACTCTTAATTTGA 2003390 30 100.0 37 .............................. TTAATAGAATGGGGGTGAATTGATTAATGGTTTACGA 2003457 30 100.0 42 .............................. CTAGATATTGTATATTTGCGTCTTGTTTTAACATAAAATAAA 2003529 30 100.0 37 .............................. AGAGTGGAGGGGTAAGTGTCATTACCAACGCAAGCAC 2003596 30 100.0 37 .............................. ATCGCAAGCCTCCTAAACTCGGTTTAATAGTTAAAGG 2003663 30 100.0 37 .............................. CCTACTAAGGGTTCTCAGCAGAATGTTGCTTCTTCTT 2003730 30 100.0 37 .............................. ATGACATTGAATAAGAGATAAAAATCTCTAAATTTAT 2003797 30 100.0 38 .............................. AAGTAATACTTTTTCTAGAAATTCATGAAATCCTTGAG 2003865 30 100.0 37 .............................. TTCATTTGCCGCTCCAGCATCCGGGCCAACCGAAGAT 2003932 30 100.0 37 .............................. ATTTTATTTAAAGTCTCTTTGTTATGATCAAAAATAT 2003999 30 100.0 37 .............................. ATTCATGCTACTGCCAGGAACTGCTCCTTAACTTCTT 2004066 30 100.0 39 .............................. ACCGATATTGTGGTTCATGGACAACAAAACAAGACGCAA 2004135 30 100.0 37 .............................. TTTGATTTAAACACACTATGAGCCACCTGTAAAGGAG 2004202 30 100.0 37 .............................. ATGTCTTCATCTGCCATGGGTAGGAGTGAAATATCCA 2004269 30 100.0 37 .............................. ACTAAAACCTCAGGAACTGCACCAATAAGTTCATCTT 2004336 30 100.0 37 .............................. TGGACTATGTCCCCTACTTCTACCGCACGATATGGGA 2004403 30 100.0 37 .............................. GTAAGAAGATAATAAGGTATGTGCCTCCTGGAGAAGA 2004470 30 100.0 37 .............................. ACATAGTCCTGGTCAATCTCCATTCCCAGTACAAAGT 2004537 30 100.0 37 .............................. TCACAGGGCAATCCGTTTCCTCGGATGCACCACCCTC 2004604 30 100.0 36 .............................. TCCCTTCTAGTATCCCGAACCCGTACACCCTGCCAG 2004670 30 100.0 38 .............................. CTGGTTAGATCGTTCTCATGGAGATAGTGTTGCCGGGA 2004738 30 100.0 37 .............................. ATGGAATCTTCCTTTAAACCCTGCTCCAGGTAAGTGT 2004805 30 100.0 38 .............................. AGATAAATGATGAATCCTTTGTTATCAGTGCTAGTCAT 2004873 30 100.0 38 .............................. GCTATAAAAAAAGCTAATCCTGATAATGCTAATACTTT 2004941 30 100.0 36 .............................. CAGGGAAAGGATGAATCATTAGAGGATAAAATTAGC 2005007 30 100.0 38 .............................. TACGCCTCCGCTTTCAACGTTCACTTCCAATACTGTTC 2005075 30 100.0 38 .............................. GGAGTAACCCTCCCAGACAATGCCCTCGTTGTTGGTGG 2005143 30 100.0 36 .............................. CATAGCCGGTGGGCGCATTATGAACGGATAGTTTAC 2005209 30 100.0 37 .............................. TTGTTGATGAGCCATAGGGGTTCACCCAGGTTTCCCC 2005276 30 100.0 36 .............................. TCGAATGAGGTTGGATATGTTTTGAGGTTTACAACA 2005342 30 100.0 36 .............................. AAATCATTAGTTCCCTCTCCCCGCTCCAATAAACAT 2005408 30 100.0 37 .............................. ATCGTAGTCCTTTGTATTTGAAAGCCATAACAGTAGC 2005475 30 100.0 37 .............................. ATAATTCAATTAACCCAATAAGGTGACTAAATGAAAG 2005542 30 100.0 35 .............................. GGGGTAGCGTCAATCATGGAATCAAAGATAGCCTC 2005607 30 100.0 37 .............................. AGTCTTCGAATGCTTTTGTCACTGTCTGCCGGTTCTG 2005674 30 100.0 37 .............................. CAAACCAAAGTACAAATAACATACAATGGAGAACCAG 2005741 30 100.0 35 .............................. TTTTTAAAAGCATTACATGACAAAACAGTAACGAA 2005806 30 100.0 37 .............................. TTGGTATGTGAGTGGTGTGATTGATTTTTGAAAGTGA 2005873 30 100.0 37 .............................. AGTTTTGGGCTGTCCATGACTTCCATCCGAGCCTCTG 2005940 30 100.0 37 .............................. ACACCATACATGTTGAAGAAGTACAAGCGGTTATGAT 2006007 30 100.0 37 .............................. CAAGATGAAATAAAAGCCTTAAAAGAAACCATAGGGG 2006074 30 100.0 36 .............................. TCACAGTATTTGTCATTAAGGAAATCACAATAATCA 2006140 30 100.0 38 .............................. TTCACTCTAACCGGGGGGGTTCAAAACACTTCAATCAA 2006208 30 100.0 37 .............................. CTGTAAAGGGTGTTTGCAATTGCGAACGCATAATTCG 2006275 30 100.0 36 .............................. AAATATGATGCAACAACCTATGTTCAGCTTGGAGGC 2006341 30 100.0 37 .............................. TGTTTCTTTTTCGTTCCCATTCTTCTAAATCATTCTC 2006408 30 96.7 37 ....................T......... AGATGGCATTGGGGGTGTTGAGTGTGGGGGTGTCCAC 2006475 30 100.0 36 .............................. TGTCCTGCTGTAATTTTTCACCCTGCTTTTGTCCTC 2006541 30 100.0 36 .............................. TTGTGTAAAATAAATAGATTGAAATTGAATAAATTT 2006607 30 100.0 37 .............................. TCAGCATAGCGACCAAGTACGGGGCGCTATTAATGGA 2006674 30 100.0 36 .............................. ATGTCTTTGCCTTGTTGTTTTTGTGTGCTTTCTAGG 2006740 30 100.0 37 .............................. ATTTAGGCCTTGGCCTTGGTAGTGGAGTTGTTGAAGG 2006807 30 100.0 36 .............................. CCAAAACACCAGTTATACCTGCGGCCCCTCAAGTGC 2006873 30 100.0 37 .............................. TTCAGTGACATGTTTAAACAGATTCAAGAAAACCCTG 2006940 30 100.0 37 .............................. CTAAAAGATCATTAAGGATAGATCATAGTATTCATGG 2007007 30 100.0 37 .............................. TTTCATCATATTTGTCAATGAAATATTCGTGAATAAA 2007074 30 100.0 36 .............................. TGATCCGAGTGGGAACGGAACTATACTCAAGACCGT 2007140 30 100.0 36 .............................. CGCATGAACTCTATTTCCACCTTCATGATTTGGAAT 2007206 30 100.0 37 .............................. TGGAAATAAGATTTTAATCAATAGGTGATAAAATGAA 2007273 30 100.0 36 .............................. CTCCTTAACTCCTCCTTATCCCATTGAAATTCAAGA 2007339 30 100.0 37 .............................. AATATTATGGTGACATGATATCACCAACATAATTTAT 2007406 30 100.0 36 .............................. ATTCCAAGTAAATTCAAGGCCCAACTAATCTTTAAA 2007472 30 100.0 36 .............................. TCTTATTTGTTTTAATATAACACCCAATGAACATAA 2007538 30 96.7 33 .......................A...... ATATCCTACTGTTGAAAAATAAGTCATTAAAAA 2007601 29 73.3 0 .....-....TT...T......T..T.T.G | ========== ====== ====== ====== ============================== ========================================== ================== 83 30 99.6 37 GCTTTAAAATAGACTCAATAGTCTGGAAAT # Left flank : GAAACAACTATTAAGCATCCTGAGATTAAACGAAAAGTTTCCTATAAATACCTCATGAGATTGGAGTGTTACAAATTAATAAAACATGTGCTCGGCGATAAAGAGTACAGGAGCTTCAGGATGTGGTGGTAAGTGTACTTGTTAATAGTTTATGATGTAGATGTTAATAGGGTGAATAAAGTAAATAAATTCCTGAAGATGTACCTTCACTGGAGGCAGAATTCAGTTTTTGAGGGTGAAATCTCAATATCTCAATTCAAAAAATTGAAATCTGGTCTCAAAGACATTGCAAATGAAGATAAAGATTCTATTTTGATCTATAATCTTAAAGATCGCAAAAATTTCAAGTTAGAAGTTATTGGGATTGAAAAAAATCCCATCGAACTGATTCTCTAGTCCGCCTTTATAAGTAAACTACATTACTGATGGTGGACAAATACACCCCTATTATTGGAGAACTTTGCACCATTTATTGGTAAAATAACCCAAAAATCGACGCG # Right flank : GCTTCTGATTTCATTAAATTGCTGGATGATTTTTATATGATTATTTTAGTAATATTACATTCTTCGCTGTTTAGTACGATTAAACTCCATTCTATTTAATCCAAGGAATCATAATAAAATACAAATACTTGAATAAATAATATTAAATGGGTGGTTTCATTGTTTCAATCAGAAATTTCAGAAGATTTTATGACAGTTATACCCTTGGAAATTAGGGAAAAATTCAATTTACAACCTGGAAATATCATGAAATGGACAATAGTAGATAATGCAGTTAAAGTTTCTTTTCATAGAGTAATATATTTAAGTGATATGATTGCCAGTAAAAACAAAGGTGATGATTAAATCTTAATCTAGGTTAAAACATACCCGATGATTTGATTTTTCAATGAAAAGCAGGAAGAGAGCGGACTACAGTTATTTTTACGGTAACTAAGTGGTAGTAGACGTCCTAACTCTGCAATTTTATTATTATCTTATGTAGAAACTCCAGTTAGGGC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAAAATAGACTCAATAGTCTGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.00,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //