Array 1 9113-11474 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBLY01000008.1 Corynebacterium pseudodiphtheriticum strain HSID17575 NODE_8_length_98427_cov_154.727325, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================== ================== 9113 29 100.0 32 ............................. ATTCAAGAGCCAACCCCGCGTGCCGAATTCAT 9174 29 100.0 32 ............................. ACGCTGTAAGCCGTTTTAAGAGGTTGGATATG 9235 29 100.0 32 ............................. CACCCTCTAGCTGGGAAAATGCGCCGATTATA 9296 29 100.0 32 ............................. AACATCAGAGACCAAATCAACTGCAATCTCAG 9357 29 100.0 32 ............................. CGCTAATCTGCCCAATCCGCGCGCTTATGCGC 9418 29 96.6 32 ............................T TGAAAATCGCGTGGCTCATGGCATCGGCCCCA 9479 29 100.0 32 ............................. CATACACAGGATCCAAGTGCCAATAGTGATCC 9540 29 100.0 32 ............................. CAGGGGAACACGATGTCGTCGAGAATCTTGCG 9601 29 100.0 32 ............................. GCGTCTGGGCATGCGTCGGCGGCTGCGTCGTC 9662 29 100.0 32 ............................. CAGTGCTCTTGCTTTGCGGTGTAGAGACGATC 9723 29 100.0 32 ............................. AAGCACATTGAGCAATACGTGACCAGTGGCGG 9784 29 100.0 32 ............................. CTGGTGTGGGTTGAGATTTGGGGTAAAAGGCT 9845 29 100.0 32 ............................. TGGGGCACCTACATAAAGCTCCCCATCAACGA 9906 29 96.6 46 ............................T TGAAAATCGCGTGGCTCATGGCAGCCGGTGCTGTCCACCCGGACGG 9981 29 100.0 32 ............................. GTTAAAAAAGTACCAGACCACGTAATTCAGTT 10042 29 100.0 32 ............................. GCGCTCGGGTGTGGGATTTTTGAGGGATCACC 10103 29 100.0 32 ............................. CGCCAAGGTAAGTATTTTGCGAGGGTTTCATT 10164 29 100.0 32 ............................. CGTAAGCAGGGGCTGAATTTTGCGCGACCAAA 10225 29 100.0 32 ............................. TAACGGGCTCATGGAGGGTGAAGCTGTTACAG 10286 29 100.0 32 ............................. TACGCGTACACCAAGAACCAGATACCTACCTG 10347 29 100.0 32 ............................. TTGGATAACCCCGCCTATCTGGATCTTTTGGG 10408 29 100.0 32 ............................. TTCCTATATCGCCGATACCGGCGTACCCCCAC 10469 29 100.0 32 ............................. GAGGAATTCAAGTTCGTTCACAAAGAAGTTGC 10530 29 100.0 32 ............................. CGGTTCCACATCGTGGAATGCAAAACCGCCAG 10591 29 100.0 32 ............................. GACATCGACTTTTGGGACGTAGTCGCCAACAA 10652 29 100.0 32 ............................. CCCATCACGGAAGGCGCGGTAGGCATGGCACT 10713 29 100.0 32 ............................. CAATCTGCTAGAAAAGTCTTATCCTTGGCAGC 10774 29 100.0 32 ............................. CAATGGGCTACACGAGCAGGCGCAAAACTACG 10835 29 100.0 32 ............................. GATATGCGGGTGCAGCAGGTTGATGCTGCTGA 10896 29 100.0 32 ............................. ACGCCGGTATTCACTGTGGAGTGCGCACCCAT 10957 29 100.0 32 ............................. ATCTCTGATTCTGCAATCGGAGACGAAGATTA 11018 29 100.0 32 ............................. TGGAATATCTAGATCGTGATCTAGCCCTTGAG 11079 29 100.0 32 ............................. CAACTGGTAAACACGCAGGTAAACCCGGTAGG 11140 29 96.6 32 .................A........... GAGTGCTACGAGTTCGCGATCCACGTCGGCAA 11201 29 100.0 32 ............................. ATGAGCCGGTAAGCCGTCTACGCGCCGACGAG 11262 29 100.0 33 ............................. ACTATCGCAGCGGTGGCGGGCACCATTGTGCAG 11324 29 100.0 32 ............................. TGCCATAGCAAAAGCTGCGTATAGGATAAGAG 11385 29 96.6 32 .C........................... GTATGTGAAAGGCGGCGCTGCGCGGATGGAGG 11446 29 93.1 0 .........................GA.. | ========== ====== ====== ====== ============================= ============================================== ================== 39 29 99.5 32 CTCTTCTCCGCGCATGCGGAGGTAATTCC # Left flank : GCCGGCGTGTCAGAGCGGAAATTCACCGAAATCAAGTTCTCAAAGAGATGTTGTCTACGCTCATGCATATTCTGGAGCCGCACTTGCCCGCTCGCGATGATGACAGGTTAGTAGCAGGGCGCGGCGACGAGGTTGTGGGACATACTCAATATGGAAAAGATGAATAAGTGTTTTTAGTATTGACTTCTACCTATCTTCCTGACCATTTGCGAGGATATTTGAGCAGATTCCTTATTGAGGTGGATTCCGGTGTTTATGTCGGCAATATCTCTCGCAGGGTACGCGACAATATTTGGAAGCGTTGTGCCGAAGCAATCGATCGCGGCAGCTTAACCATGATCAATAGTGATTCCAGTCGAGAGCAAGGATTCGCTGTGAACACTCTTGGTCCACAGCGCAAACATATAATAGACTTGGACGGCATGTTGTTACCCGCGACCTTATCGGCTGTAGCGTCACAAAACGACGCTGACCGCTAAAGTTTTCGCAGGTAACGCAGT # Right flank : CTGCGCTTGCAACTTGCCGAATGCTTGCTTGAGGGCATCAGCATGCTCTTGGAGCTCCCCGGCGCTGCTGCCCCGGAGTAGAGAGACATCAACGCCGGATTCCTGGGTAATCTGGGCGCGCTTTCACGCAGCTGCAGCTCGCGGTTTTCTTCTTCCAGCTGGGCTAATTTCTCGGCCTGCTTTTGCGCATCAGTCTTATTCGCCTCTTGCGCCTACCGGTACTTCTCCGCATCAGTGCGGTATGCATTGCGCTCGGTGCGGTACTTAGCGGCTTCTTTACGCAGCCTTGCGATCTCGGATTGTAAATCCTGCTCGGAGCTCTGGTTATCCTCCCTGCGATCAGCCGCATCTGTATCCTTGGCCGCCTGTTGACTCTCGGAAATAGGTCCACGTTCTTCGAGGCCGTCCTCAGTCTGGTTACCCGAGTTATCTGCGGTGGCGGTTGCGGTATCCATTGGTGATTCCTCCTGGGAATTCTTGGGGTGGATATGACAAAACCC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCATGCGGAGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //