Array 1 458761-463772 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235919.1 Pleurocapsa sp. PCC 7319 Pleur7319scaffold_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 458761 37 100.0 37 ..................................... GTTACACTTTTATGCTTTGCGACGTTGCTATCAACCT 458835 37 100.0 33 ..................................... CTGTTGAAAATCTTCAATATCTTCTGGTTCATT 458905 37 100.0 38 ..................................... GAAGGGCAATAACTTTCCCCAGCACAATGGAAATCTTT 458980 37 100.0 34 ..................................... AGCACCAAGGCGAATTTTTGTAATTTTAATGGGA 459051 37 100.0 36 ..................................... GCTAATAAGCTCGACGCTACTAACATAATCTCAACT 459124 37 100.0 37 ..................................... TTCAATTCCTTCATGATCAACAAAACTCTCGGCTTAA 459198 37 100.0 36 ..................................... TGAATTAGTTGTAATCGATTAACAAATAACTTAAGT 459271 37 100.0 36 ..................................... GCTTCTGACCAATTGGCACAAATTAAGTCAATAATT 459344 37 100.0 37 ..................................... AAACGCTCTAAAAAGCCAAAATGCGCCGACTGTCCCC 459418 37 100.0 37 ..................................... ATAGACCAGGGCAACTTGGCAGGAACTGATATTGAAG 459492 37 100.0 37 ..................................... CCCCAGCACCACGGCAGCGGCGCACCATAGTTCGATT 459566 37 100.0 40 ..................................... CCTTGATATCATTTGAAAGCAGAATACCATTGTGTAAAGT 459643 37 100.0 33 ..................................... GTAAACTCTGACCATCTTCCCGCTATGTCTAGA 459713 37 100.0 48 ..................................... GCGTGTTGTAATTTTGAAATATTTCTATGTGTAATCACGGATTGTAAA 459798 37 100.0 40 ..................................... ATTTGTCCAAATTGATCGTTCCTCGATACGTAGTCTCCAG 459875 37 100.0 35 ..................................... TCATTAAGTCGAAGGGGCTGGATAAGCATTTGAGA 459947 37 100.0 33 ..................................... TCAGACAGATGCTTTGAAAGAGTTGCAACAACA 460017 37 100.0 39 ..................................... GTTTCGCTGGCATCGATGGATTCGGGATCGCCGCGATCG 460093 37 100.0 34 ..................................... ACATTTCGCGGGGAATACTGGGTAGACAAGGATT 460164 37 100.0 40 ..................................... CTATCTGGGAATACTGATCCACCAAATTAGATATATCACC 460241 37 100.0 31 ..................................... AAGGAAGATTGATTTACCTCGCAGCTACCAG 460309 37 100.0 35 ..................................... ATAGTTAGGTGTAATTATTGGAATAACTGTAAAAG 460381 37 100.0 36 ..................................... ACTTTGCCATCTGCCCTCTGCCTACATGCGGCGAAC 460454 37 100.0 38 ..................................... AGGGGAAGATAGGCTTAACCCTTATGACTTGGCGACGT 460529 37 100.0 34 ..................................... AAGCTTTTCTAGATCAGGAAATTACATTTGAAGA 460600 37 100.0 34 ..................................... ACGGAAATGATGGTATTTCCATCGCAAGTTTCCC 460671 37 100.0 39 ..................................... AGATCAACTAACAGCCAATTTAGATTTATATCGTGGCGA 460747 37 100.0 34 ..................................... ATAAATTTAATTTGTTTATCAGAGAGCTAATAGA 460818 37 100.0 38 ..................................... TGTTTAATTTACTTTGTGCGCGACCTTATAAGTGCCGC 460893 37 100.0 39 ..................................... GAAATGATGATTGACTTTACGGGAACGTATTTTTCCAAT 460969 37 100.0 34 ..................................... TCTTGGATCGATATCGCTCACAATTACGAAGAGT 461040 37 100.0 34 ..................................... CTCTGCACCTTCAACTTTGTATTTAATCCCTAAA 461111 37 100.0 34 ..................................... GCTCATGCCTACTGGCTCTAAAGCTGCCCCTACT 461182 37 100.0 38 ..................................... AATCCGCTGCTGCTTTTGTGATGAAGTTGATAAATATC 461257 37 100.0 35 ..................................... CCGCTTGAAGCTATTGCCGCCCGCTTAAAGAAACT 461329 37 100.0 34 ..................................... AAATCTAATCGTGTAATTATCAATTGAGTACCTA 461400 37 100.0 35 ..................................... AATCTTATCTTTTAGATCTTGCAACTCGGCTTTTG 461472 37 100.0 37 ..................................... AAAGAAACAGAAGTGCTTACTTCTGGTTTGAAAAAGG 461546 37 100.0 41 ..................................... CTTTGATCAATTGGACAAGGCGGATCAATTTCATACGGCAT 461624 37 100.0 34 ..................................... ATCTTGGCAGGGGAGAAAAATTTGAATCTTTCGA 461695 37 100.0 34 ..................................... TAGCCTGCTGCGCCTCATCTTTAAAGTTTTCGAT 461766 37 100.0 35 ..................................... CCTACACTTTCTTTGGTGTAGACGAAAAAATTCAT 461838 37 100.0 32 ..................................... ATAACCCTTATGGTGACTTTACCATTAGCCAT 461907 37 100.0 35 ..................................... ATGCACTGAGAGCTATTCAACCGCCTACCTCTACA 461979 37 100.0 33 ..................................... GGAATGTAGTTGGTCGGAGAATAGCAGCGTCGG 462049 37 100.0 35 ..................................... AGATTTCTCCAATAACTACCAGAAGAGAGCAAAAA 462121 37 100.0 36 ..................................... CCTCAAAAGCGGCTCAAAATCTGGGATTCATCACAC 462194 37 100.0 38 ..................................... AAAAGAAGCTCGATTAGAGACAGAAAGATTATTATCTG 462269 37 100.0 34 ..................................... TTACGCCTATTATTTATCCATGCGAACCTACAAA 462340 37 100.0 37 ..................................... TTTTTCCTCCTTGGTGTACTTTTGATACCCTACAAAT 462414 37 100.0 38 ..................................... AAACATGAATTTGTGACTCCAAGGCATTGGGGGATAAG 462489 37 100.0 36 ..................................... TTGCATATCCTACTTTCATCGGGGGCTTCGCAAGGA 462562 37 100.0 35 ..................................... TCTAACCTTAAACATTTGTCTTTATGGTTATAAAC 462634 37 100.0 33 ..................................... AGAAGCGACGAGAAGATTTCTTCAAAAAGTCCA 462704 37 100.0 38 ..................................... AAGCTGAAAGTAGTACCCTTCTTTTTTATCAACAAAGG 462779 37 100.0 36 ..................................... AAAGACGATTGTGATTAATGGTTTACAACCGCCAAT 462852 37 100.0 37 ..................................... AATGCTGGCTCTACAGCTTTTACACCCTTACCCTTAA 462926 37 100.0 35 ..................................... GGTATTAACGAGGGAAAACCCAATTGGTTTTTCGC 462998 37 100.0 37 ..................................... AGAGAGTTAATAGAAATAGGTGAAGAAAGGTGTGATT 463072 37 100.0 38 ..................................... GAGGAGGTGAGCGGCGAAGCACTTGAGATAAGACAAAA 463147 37 100.0 35 ..................................... CCCTCTTTAGGATCTTCAAGTAAGCTGGCAGGAAG 463219 37 100.0 37 ..................................... TCACCTGTATAAGCGTAAATCCTGATCGTGGCATCTT 463293 37 100.0 37 ..................................... AAAGAGACAAGTAAGTAAAACACTAACAATAATTAAA 463367 37 100.0 43 ..................................... GATAGGACAGGTCATCATCCCCTAGCACTCATCATGACTCCAT 463447 37 100.0 37 ..................................... ATGCCACACATGGACTAGAGGCGGCTTTTAACCTAGC 463521 37 100.0 33 ..................................... AAACACATGCCGTTTCGATACAGTGTAGTAATT 463591 37 100.0 34 ..................................... CAAACAAATGTTGAATATCTAGCCATATCCCAAG 463662 37 100.0 37 ..................................... ACAAGTGCTGTTAGTTCATGAGAAACAAGACATAACC 463736 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================ ================== 69 37 100.0 36 GTTTAAACTACAATTAATTCCTATGAGGAATTGAAAC # Left flank : TAGTTAGCTACGATATATCTGAAGATAAGCGACGTACCAAAATTCATGACATCCTATCTTCTTATGGTCAATGGATGCAATATAGTTTGTTTGAGTGTGATTTAACTAAAACTGAATATGCTAAATTGCGATCGCGTCTCAATAAAATAATTAACTCCGATACCGATAGTATTCGTTTTTACTTTCTCTGTAGTTGTTGCCAAAATAAAATAGAGCGTATTAGTGGCGAAGCTGTTCGAGATAATACTATTTTCTTTGCTTAGTAAAATATTTGCGCGAAAGGATAGGTGTAGAAAATGACAAGATACAAAAAATACTGGAAATTCATACTAAGTAAGGTTTTGAGTATAATCAAGCCAACTTGTACACCGCGCACTTTACGGAGTATGGCTTTCAGCGATTCCCCCTCTATTTATCTATTTTTTTTGTGCTATTATCAACTCAGTACCGCGCCAATAAACTTTAAAAACCAAATATATCAGAGGTTTTGAAGTCTTGCG # Right flank : CATCAATCGAAAAGGTTGCTGAATATTTAGCTAAAGTGTTTAAACTACAATTAATTAAAAGCGTAACAAATTTGCATGAAATGAGAATTTTACGATATGCTCGTTATCAGTGTTAGAAATAAAGAGCGACCATGGAATTTGAACTGAGAATAGTAGTAGAAAAGGTTGCCATCAGTACTCAAGAAGTTGTTGAGCGCAATACCCTCAAAACCTACGATATCGAAGCACCTCAATCTATTCTAGAACTCGGATTGCGACATGCAGAACAGATTTCATTATTGTCTAAGGTTCAAAACTCGATTCTGGCAGAACAATGCAAACTAATCCGAAAAGACCACAAGACTTGTCCTAATTGTGGTGGAAAGTTGGGGCGTAATGGCACGACTAAATCGAAATTTCACGCCGTGTTCAGCGATCATCAACTAACCATCCAAAAACATCGCTGTCAAAACCCAGATTGTCGTTGGCAACAATCTTCCACCACTAATGCTGTGTTTGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTACAATTAATTCCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA //