Array 1 9733037-9731461 **** Predicted by CRISPRDetect 2.4 *** >NC_020126.1 Myxococcus stipitatus DSM 14675, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 9733036 37 100.0 32 ..................................... GTCGCGCCTGGCCCGACCACGGTCGCGGCGTA 9732967 37 100.0 35 ..................................... GAGGGACTCGCGCCGGTCATCACCGTGTTTGGGCA 9732895 37 100.0 33 ..................................... TCTGCAATCGACTTGGCGATGACGTGGCCCATC 9732825 37 100.0 36 ..................................... CGAGAGGGGCGGGGAACCGCTCCCGGAACCCGGAGA 9732752 37 100.0 33 ..................................... ATGGAGGCAATACATGCGGAGCTTGTGCCTGCT 9732682 37 100.0 34 ..................................... CCCCACTTGCGCAGCGACAAGGCCGCGTGGCTCG 9732611 37 100.0 34 ..................................... GGCTCAGGTGGCATGACTCCGCCCTGGTACATCT 9732540 37 100.0 34 ..................................... ACCTCGCGCTCGGCCAGCTCCAGCGGCACATCGC 9732469 37 100.0 33 ..................................... CTCCGACGACATCCGTCATCCCCGGTACCGGAC 9732399 37 100.0 36 ..................................... ACTTCGTGCCGACCAGTTCAGGACGCAGGCTTGCGT 9732326 37 100.0 35 ..................................... ACGGCGCACTCGGGGCAGATTTCCGGGGCGCCCTC 9732254 37 100.0 34 ..................................... GGCACGATGGGCGTGGCGTCCTCCGCGAGGTTGA 9732183 37 100.0 34 ..................................... ACCACGTCCGGCGCGCACTCGCCCCAGAAGTCGC 9732112 37 100.0 33 ..................................... CAGTGGGCCGCCGTGGGCCCAGTAGTGGCGGGC 9732042 36 91.9 33 ..............-....................CG CCGGCTCCGAGCTGATGATTTGATCTGGGTGAG 9731973 35 89.2 14 ..................-............-...CA TGGGCTACGGCGCT Deletion [9731925] 9731924 37 94.6 33 .C........................C.......... AACCTCATCGTCAACATCGAGCGGGCGTCGTCG GAGT [9731915] 9731850 37 94.6 34 ...............A.......A............. CTCCACTTTGAGCAGGGATGCGGCAAGTCCAAGC 9731779 37 94.6 33 ......................C.............T GACGCCGAAACCGACCAGCTTTTCCACGCCGAC 9731709 37 89.2 34 .........G.C...T...................T. GGTTGTATGTTCGCGTGTCGACCGTCGAGCAGAC 9731638 37 97.3 35 ...............A..................... GTCGGGCAGGCCGCGCTTGCCGTCGCGACGATGGA 9731566 37 91.9 32 ..........A.....A.A.................. CATCACGCTGTTCCCCGTGTCGAATCACCACG 9731497 37 73.0 0 .....C......CC..A.....C...CA....C..CG | ========== ====== ====== ====== ===================================== ==================================== ================== 23 37 96.4 33 GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Left flank : AAGAAGGTCACTGTGCTCGTTTGCTACGACGTGCAGGTGACGGACGCGGATGGGCCGCGCCGCCTGCGGAGAATCGCTCGAGCGTGCAAGGACCACGGTGTTCGGGTTCAGTACTCCGTTTTCGAGTGCGTGCTGGAGCCCAAGGATTGGGTGGTTCTGAGGGCTCGGCTGCTCACGGAGCTGGATGACTCGTGCGATAGCCTGCGCTTCTATTTCCTGAGCGAGGATGTGGCGAAGAAGACGGAGCACCATGGTGCGAGGGTTCCTCTCGATGTCGAAGGACCACTCATCGTGTGATGAGGGGCGGAGCGCACTTGGGCGTGCGCGGACCTCTATCGGTGTGGCCTTCGTCGGAGGTTCGCGCTCTTTGAAATCTCCAATAGTCGTAGGGAGTTGGCGGGAGCGCGGGCTGATGGCCGTGGCGATGGAGACACTGTCGGAGCCAGGTTCGCGGGATTCGGCCGGATTCCCCAGGAGTGATGGTAGGTTGCAGGTGCAGG # Right flank : TCCCTCACACCCCCCAGGGACGCAGGAACTCCTCCGCCTCAGCCAGAATCCGCGGGAGCGACGCCACCAGCTCGTGTCCGTCCTCCACCTCCACGAGCTTCACGTTCCGCTTCCCCTCCGCCCACTGCCTCGAATACCGGATGTCACACGTGTCATCCGCCCTCCCATGAATCACCAGCGTGGGCACCCTGACATCCGGCCACCCACCGAACTTCCCATCCACCGCCTCCGCGTCCCCGATGAAGCCCGAGTGCACTCGCACCTTCCGCTTCTCCGCGAAGTCGTCCGTCTCAATCCACCCCTGCTTCTCCCACAACCTCCACGCCGCCTCTCCCATCCTCCTCCTCAACTGCCGCACCACCTGGAACGCCGGCGCCAACAACACCAACCCGCTCACCCTCGCATCCGCCGCCGCGGTGTGCGCCGCCACCAACCCGCCCAGACTCGATCCCAGCAACACCGCCCGCTCCTTCTCCCCTCCCATCGCCTCCCGCACCGTC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [31-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 10095696-10094136 **** Predicted by CRISPRDetect 2.4 *** >NC_020126.1 Myxococcus stipitatus DSM 14675, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 10095695 36 100.0 34 .................................... TGGTTTGCCAACGGGCACCCTGGGTTTCTCGTCA 10095625 36 97.2 39 ..................A................. CCGAGCCACGTGGCGATGGCATCCCTCACGGACTTCAAC 10095550 36 97.2 40 ........................T........... CCTGTCGCCAGGTCCAAGATTGCGGCCCGCAATCGCTCGA 10095474 36 100.0 35 .................................... GTGGTGCCCTTGTCGCGCAGCTCGCGGGCCGTCTG 10095403 36 100.0 40 .................................... GAGGCGGACGACCCGCTCCAATTCTGGGCCTTCTGCTACG 10095327 36 100.0 43 .................................... CTGGGCATGCCTGCTTCTGCGGACGCCCACGACGCGGGGGCCA 10095248 36 100.0 35 .................................... GCTGTCGTAGGAGTGGACTGGCCCGAGTGAGGAGA 10095177 36 100.0 38 .................................... ATGGGAGCGGTGGCGTCGTCTTGGAGCCGAATGGCCAC 10095103 36 100.0 37 .................................... AGAATCTCGGCCTTGAAGGTCTTCACGACAAGATCAT 10095030 36 100.0 36 .................................... CCATTGACGAGGCTGCGGCGCGCCTGCACTGCTCCC 10094958 36 100.0 35 .................................... CTGCAGGTGCTGGGAACCCATGCGGGGGAGGCAGG 10094887 36 100.0 36 .................................... AATGACCCCGATTTTCGCCTTCTTGATAATCATGCT 10094815 36 100.0 34 .................................... AAGCGGGTCCCCATCCTCATGGAGCGCTGGGACA 10094745 36 100.0 37 .................................... TTAGCTCCAGCCGCCGTGCAGTTTGAGCCGTTTGAGA 10094672 36 100.0 36 .................................... CTCCTACTTCCCTTCACCCTCGCCCTTCACCTTGTA 10094600 36 100.0 35 .................................... CCAGGATGCCCACCAGCTTCGTCGAAGCGGCCGAT 10094529 36 100.0 35 .................................... GAGCGGGAGGCGCTCGCGCAGCGCCTGGGAATGGC 10094458 36 100.0 32 .................................... CACCCCGCGCGGCGTGAGCACGCCCACGCCGT 10094390 36 97.2 40 ..........T......................... TCCTTGTTGCGCTCGGGGCCCGCGCGCCCGCCCAGGCGCT 10094314 36 97.2 37 .................................T.. GACTCCGCGATGAAGGCAACGGCAGCGAGCTGGAGCT 10094241 36 91.7 34 ................C.....G............A AACTGGTGAGAGAGGGTGAAGTCGATGTTGGCGT 10094171 36 97.2 0 ..........T......................... | ========== ====== ====== ====== ==================================== =========================================== ================== 22 36 99.0 37 CCGTGGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : CGGTGATGATGCTCGAGGGGCTGAAGTCCCGAAACGCGCGCGCTTCGGTGGGGGCGGACAAGGGCTACGACACGGCGGACTTCGTCGCGGACTGCCGGCGCATGGGAGTGACGCCTCACATTGCGCAGACGACGGATACTCGACGGCGCTCGGCCATCGACAGGCGAACGACGAGGCCTGCCGGATACGCCCTCAGCCAGCGGATACGGAAACGAATCGAAGAAGTCTGGGGCTGGATGAAGACGGTGGGCGGCTTCCGTAAGACGCGCTTCAAAGGCAGGGAGCGGACGGAACTGGCGGCCTACCTGGTAGGCGCCGCGTACAACCTGGTGCGGATGGCGCGGCTGGTTGCCGCATAATAGGCGCCCTTCGCCCTCCGCCTCGCTTGGATGACAAGGTTGAGAACGAAGGGCACGGAGAGGCCCGGTCTCATGCCTTCAAACCGGGCTTCTTCAACACCCTGCTAGCCCAAGATTCGACGTTCTGTCGAAAGGAAGTAC # Right flank : TCTCCGCGCGTGGTACGCGAGCCGTCCCAGTACAAGGCGCATCTGTCCGCTGTGCGAGGGGTGGCTCAACCCTTCACCGACGAAGCCACGTCCCGGTCGTAACCTGGTGCACCGCGGCAACTCGCTGCTCGGTGGTATGTTCTGGACGGATCGAATGGCATCAAAGAGGCTGGCATTCAATGACTATCATCCCGCGTGGGTGGTCGCGATATGCCCTCGCTGCTCACCAGTGCGCTCGCCAACATCTGACATCCCCCAAACAGCTGTGCTATCTGGCTTTGCATGCTTTTCGCGTACGCGCATGGACGCAGTGGCCTCGTCGCTTCTCTCTCCGCGCTTGCGCTGTCCTCCGGATGTGGCTCCGCGACTGTTGGAGGAGTCGGTATGCCGCCCGCGACCGCCAGATGGGTCAGTCCAGTGGTTCGGTCGCCTGATGGTGGTGAGGTGCGCTTCGCCATCTACTACGGCCCATGGCAGTGCAACACTCGGCAGCTAGCGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTGGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 3 10096998-10098407 **** Predicted by CRISPRDetect 2.4 *** >NC_020126.1 Myxococcus stipitatus DSM 14675, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 10096998 36 100.0 36 .................................... TCGACGCTGATGCGGAAGCGTGCGCCGACTTCGAGA 10097070 36 100.0 34 .................................... TCAGGGGTGTGTCGAAGCTCCTGGGAACCAACAT 10097140 36 100.0 37 .................................... TCGTGACGGGGTTGGAAGCATCGCTCAACAACGTTGG 10097213 36 100.0 38 .................................... ATTAGGATAACCAGTAGACCTCTTAGGGTTCCTCTTAG 10097287 36 100.0 35 .................................... CGGTGCGCCTCCGCGCCCTTGGCCTCGCACGTGAA 10097358 36 100.0 36 .................................... GATTGCACTCGCTCTTCCCGGAGCTCCTGTCGCAGG 10097430 36 100.0 34 .................................... GCCGCGCCGAGTGGTTGGCCGCGCACGTGGGCTG 10097500 36 100.0 38 .................................... TAGACTATGGACGAGAGAGTGACCTGGGACGAGTATTT 10097574 36 100.0 37 .................................... TTCTCATTTGGTGTCACACCATCAGAGAGCGGGCCTC 10097647 36 100.0 39 .................................... TTGGGTTTTGGGTTCCTACGTTGACCAGTCTTGAAGTTG 10097722 36 100.0 34 .................................... CGTTGGCGCCCGTGCCGTTGCGCGAGACGCCCTG 10097792 36 100.0 36 .................................... CCGTTGAACCCTGAAGGTCATCATGCCTCTCCACGA 10097864 36 100.0 35 .................................... TTCAAACTGCTAGATCCCAAAGGTAAGCGAAAACT 10097935 36 100.0 31 .................................... GTGGGTGGTGCTGGAACTGATTCGACGTATT 10098002 36 100.0 40 .................................... TGCCCACCGAGGTGGAGTCCAACCCGATGGCCGTCACCTC 10098078 36 100.0 36 .................................... TGAGCGTACGCATGCAGAGAAGCACCGACTGCCAGG 10098150 36 100.0 38 .................................... CTGCTGCGCGGCGGCACGTCCTGCGGCATCATCACCGC 10098224 36 100.0 43 .................................... TGCTCCCGATCCCGTTCGAGACGTTCCCGCCCCAGCTCTACGG 10098303 36 100.0 33 .................................... TGGGACCTTTTGTACTATGAGTCATGGCTTTCT 10098372 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 20 36 100.0 36 GTGCTCAACGCCTTCCGGCATCACGGCGAGCCACGG # Left flank : CGCTGCTGGTCAGCCCCGCGCTTGCGCCTGACTCATCACCGCCAGGAAGAATCTCCGGGCGACGTCGTGCTCCAGGAGCCGGTCCCGGTTCTGCGAGAAGGTGCTGTGGTCGAAGGAGGCGTCCTCCATCCCCATGTCGAGGAACCACCGGAAGAGGAGGTTGTAGTCGAGCTGCTCGCAGAAGAGCCGCTCGCTTCTCACCGAGTAGAACGCCATGAGCAAGCAGGACTTCAGCAACTGCTCCGGCGGGATGCTCGGCCGGCCGGTGTCGCTGTACATCGCATCAAACGTCGGCGAGAGCGCCGCCAGCGCGGCGTCCGCCATGTCCTTCACCCTGCGCAGCGGATGGGCCGCCGGGACTCGGTCTCCCGGCGTCCTCAAGCTGAACAGCGTCGTCTGCTGCTTGGGCCGTCCGCGCATCGCTGCCTCCGATGCGCGGAGGACACCACGTCACAGTGCGGGGTGTCGATCCCTCGGAGGGGTTTCTCAACACCCTGCTA # Right flank : GAGCCCCGCTCAATTCGCAAGGAACTCCAGCCACTTACGTCCCCCCTTTTCAAGCACCCCCACCCTACGAACCATCTCCCGCATCCTCCACGCGTCCTCGCCTCGCCAACCGCCTGAAATCCCAAGGCTTTTACCCATTCAAGCACCTATTCACCTGTCAAAGAGCACTCAACCCCGCGTCGGACCTCAGCTTTTCACCCGATTCCGCGTGAAACCCTCTCCGCCAGGCGCAGGTGCATGAATGTCCAGCGCCTCACAGCACGCGGAACGGCGGTGGCTCCTCCGGCCAGTCCTCCCCGGGGTTGATAGCCCGCACCCGCTCCACACAGCCACCGCACAACCCAATCACCAACAAGGTATCCACGGGGTCCATCCGCCGTGCCAGCTCCCACCGGAGCTGCTCCCGGTCCCGGTCCGTCAACAAGCACCGGAACACGGAGAGCTGCAACCACTCCCCGTACCCCTTCAACAACGCATACACCTTGCGCCATCGCTTCGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCAACGCCTTCCGGCATCACGGCGAGCCACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 4 10116085-10114603 **** Predicted by CRISPRDetect 2.4 *** >NC_020126.1 Myxococcus stipitatus DSM 14675, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 10116084 36 100.0 36 .................................... TACTTCATCGCCGTGGCGACGGCCTTCAAGCCGTGG 10116012 36 100.0 35 .................................... TCATACTTGGACATCTTAGACCTCGGAATCCTGGG 10115941 36 97.2 36 ............A....................... CAGGTATCCATACAGAGAGATGCTACCTGTAAATCC 10115869 36 100.0 38 .................................... TCCTCGGCCCCGCCACTGCCAGCGCCTGCCGCTCGAGC 10115795 36 100.0 34 .................................... CGTCTCAACCAATGATTTCGTCAGGACTGTAATA 10115725 36 100.0 37 .................................... CCGTAGAGCTGGGGCGGGAACGTCTCGAACGGGATCG 10115652 36 100.0 38 .................................... AAGTTGTAGCGAGCGGTGGAGCTACGGAAGGGGGTGAG 10115578 36 100.0 37 .................................... ACGCAATCATTATCATTTCTTTTTCAGTCATGTGTCC 10115505 36 100.0 39 .................................... AAATCTCCGGGCGACATGGTAACAAAGGAATTGTTACAC 10115430 36 100.0 35 .................................... TATATGGCCCAAATCGAATTCTCTCTACAGGCCAA 10115359 36 100.0 41 .................................... TGAGAAGGCGCGTCGCATTGGTGTGATGGCAATGGTCGGAG 10115282 36 100.0 37 .................................... TCTTGATGCCGCGCAGCGCGGCTTCCACCTGGACCGG 10115209 36 100.0 36 .................................... AGTGACTCGGGAAACTCCAGGTCGCTCGTGTCAATC 10115137 36 100.0 38 .................................... ATTTGGGGAATCTGATACTTCGTCACCGTTTCCAGGTC 10115063 36 100.0 36 .................................... GCTTCTCCAGATCGTCGACGCACAGGACCCTCCTCT 10114991 36 100.0 34 .................................... TGATGGCGAGCCGAGAGAATGACGAGCTCGTCCG 10114921 36 100.0 34 .................................... TGGATCGCGCCCGCGATCACCGCCGTGAACGTGA 10114851 36 97.2 37 ..........................T......... TTCTTCCCCGCCTTCACCCATCCCCCCATCTGGTCGA 10114778 36 97.2 34 ...............G.................... GAGCGCGCACCGATTGGCACCTCGCCACCTGACG 10114708 36 91.7 34 ....A.T.............C............... CCCTTGAAGTGGACCTTGCCGTTGAGGTCGTCGT 10114638 36 97.2 0 .......................G............ | ========== ====== ====== ====== ==================================== ========================================= ================== 21 36 99.1 36 CCGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : GAGCCTGGGGACTTGGTGGAGGACGTGGGCGCGACGAGGACGCGGAGGCGTTCGAGGAAGCGGGGAGGGGGATGAGTGGGGCCCAGTGTTGCGGTCAGGTGGTTTCGGTTCCTTGCCGCGGGTGGTTTCGACGGGGCCGCGGGAGAAGCGCATGTGGCCGCGAGGGCGGTGCGCGGCGGTGGCGTCTTGCTGGGGGCGGTGGATGCGGACGTCCAGGGGTGTGCGGGGTGTGGAGGGCGTGACAGTGTTTGGAGTTGGACTTTCAAGCACCTCCGCGTGGCGGAGGCTCGGGAGGGGAATCGAGGTGAAATGCCGAATCCTGGCGCGGGGTTGCGGCTCTTTTTCAGGTGAATAGGTGCTTGAATGGGGAAATGCGTTGGAGTTTCGAGGGGTTGCGGAGTGTGGGTGATGGAGTGGGAGCGGGTTGCTGCGAGGAGGGTGGGGGTGCTTGAAAACAGGGGGGACAAGCAGGCGGAATCGTTCGAGATTCCAGGGCGGCT # Right flank : GTCAGTCATCTCGCCGATGCATTCACGGAACGCGTGGACCGACAGGGTTGATGTCGGCGGGCGTGTGCGCATTCGTCGGTGTTGGATGGATCCGCGGTCGCCGAGCGCGCCTGATGCGCGCCACGGGTAGTGGCTGCCTTGGGCATGGTCGCCCACCGCGAACCACTTGAAGCGCACCACGCCACCGTCGCCACATTCCTGTCCGGACGGGTACCCCGAAGAAAAATCACGAGGCCGCGAGGGATGCGCGCGCGGTTGGCGTCTTCCTCGGTGGACATGTGGAACACCGAACCTCCATTCATCGAGCGTGCCCCCCCGAGAGCCTCGGGCCTGGCGATTCGCGGGCGCGAGATGCCCGCGTTGTCCATCCCATCGGGGTGGCATCGGCTTTCCGTGCGCGTTGTCGCTCAATGACCTTCCAGCCCGAGGGTTCTGTCCGCCTCGCGCGACGACGTGTCCTCCGTCATATCCAGGGCCTCCCCGGTGAGGCCGTCGCACGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //