Array 1 46425-39920 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBIM01000045.1 Pediococcus inopinatus strain Wikim15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 46424 36 100.0 30 .................................... CAAAAGTCTATCACAAATGGTAGATTGTAA 46358 36 100.0 30 .................................... ATAACTTTCTAAGTTTATTACAGGAAAATG 46292 36 100.0 30 .................................... TAAGCACAAGTACAGCAAGCATGACATTGT 46226 36 100.0 30 .................................... AACAGACACGTGCTTTGTTCCGTTGACTAG 46160 36 100.0 30 .................................... ATTGGTTTTGATGCGTCAATGACCAATGAT 46094 36 100.0 30 .................................... TGGTTACTCACGATAAAAATGGATTGGGAA 46028 36 100.0 30 .................................... ACTAATTTATCAATGTGCCTTGTGAATGTC 45962 36 100.0 30 .................................... ATGGATATGATGACTTGCTTGCTGGTATTC 45896 36 100.0 30 .................................... TGTACCCGTTTACCAGCCCTCTTAGCACTA 45830 36 100.0 30 .................................... TATAGAAAAGGCATAAACGTTCTTAGCGTT 45764 36 100.0 30 .................................... GGATGTGGATGAACCTATCCGGATGTTTAA 45698 36 100.0 30 .................................... CACTGTTTGTACGTCTGTAATCACACCCAA 45632 36 100.0 30 .................................... CATCTCATCTTGAGATAATTGCATTTCGGG 45566 36 100.0 30 .................................... TTCACTCTATACATATATTATAATGCGGCA 45500 36 100.0 30 .................................... CCATTCTCTCCGCGATTGCCTTAATAACGG 45434 36 100.0 30 .................................... CCGAATCATTTGTAATGTGCTGGGAACAGT 45368 36 100.0 30 .................................... CAATTCATCAGCTTAGGCACTCACATGCTT 45302 36 100.0 30 .................................... GAATCAAGCTAACAAAGCGCAGTTAACCGG 45236 36 100.0 30 .................................... TGCATTAGTAGAAACTTTATCGAACATTCC 45170 36 100.0 30 .................................... TCATGGTCTCAGCGTCAGATTGCAAAGCTT 45104 36 100.0 30 .................................... CACAATGGCCAATCAAAATACACCTGATCC 45038 36 100.0 30 .................................... TCCTAAATGAGCTTTATTATTAACTTGAGT 44972 36 100.0 30 .................................... ACTCGAATTCCAATTAAGACTAGTTCATCT 44906 36 100.0 30 .................................... ATCATTAGCCTGGCCGTCTTGGATCCAATC 44840 36 100.0 30 .................................... GATTAATAATCACTTGTTTATTATCTTGAT 44774 36 100.0 30 .................................... GAACACTGATTTGGTTAACCTTCCAGCAGG 44708 36 100.0 30 .................................... GCTAATTTGAATGGAAAAGCCGTATCCACA 44642 36 100.0 30 .................................... GAGAATATGAACGCATCCACCGCAATAAAA 44576 36 100.0 30 .................................... AGGATTGTACCCGCCTTCCCCACTTGCCCC 44510 36 100.0 30 .................................... AGAACGTTGGACCAGTTGGGAAGAGCAAAT 44444 36 100.0 30 .................................... GTTGCCAGCAGATAGCTTACTCATAACATT 44378 36 100.0 30 .................................... TTCACATATAACGATATTACCGGCACGACA 44312 36 100.0 30 .................................... TAGTGAGAGCAGCATTGAACCTGCTAAGCA 44246 36 100.0 30 .................................... ACCTGATTGAAGTTGCGTGTTGAACAGCTT 44180 36 100.0 30 .................................... ATGGAAAAGTAATGATATTACCTGGTCCTA 44114 36 100.0 30 .................................... TTTGGTGCTGCATACTCATACCGTGCACCA 44048 36 100.0 30 .................................... TTTAATGTTGAAATTATCGCATTTGGTTTA 43982 36 100.0 30 .................................... CCTAGGGAAGTGAAGGCCTTAACTAATGTG 43916 36 100.0 30 .................................... TGTGTCTACCCAGTCATCACCATACAACTC 43850 36 100.0 30 .................................... TTTGGTTTGTATGGTTGTCCATATTTCAGG 43784 36 100.0 30 .................................... AACTTTGCTACCATTTATGCAGCCGATAAG 43718 36 100.0 30 .................................... TAATCTCTTAGCATACTTTCCAACGGTATC 43652 36 100.0 30 .................................... TTAACCATCTTATATGTGCTCTCACGAACT 43586 36 100.0 30 .................................... TAAAGGAATCTGATAAAGCCTTAGTCGAGA 43520 36 100.0 30 .................................... AAATATGTTGACAAGTATTTTTATATGGGT 43454 36 100.0 30 .................................... ATAATTTTTTTCATTCCAAACATCCACCTT 43388 36 100.0 30 .................................... GAACAGCCCAGCTATTCATCTAATCAGTTG 43322 36 100.0 30 .................................... ATATGAAACAAGGTTTAATCAAAACATATG 43256 36 100.0 30 .................................... ACCACAGCATACAATGCACGGGCTGAATTT 43190 36 100.0 30 .................................... CCCGAACGTTAGTGATGATCATGTGACTAT 43124 36 100.0 30 .................................... ATAAATTAAAAAACTTTGTCAAATCTATTG 43058 36 100.0 30 .................................... AATCGTTAACAAGTTATAGCCTTTTTGTAG 42992 36 100.0 30 .................................... CAAGACTATAAAGTTAGCAAACTAGCTCCT 42926 36 100.0 30 .................................... TGGACAAACTTAGGCTTATCCAATGCGGAT 42860 36 100.0 30 .................................... GAAACGTGAACAGGAATTGCGTTATCCAAC 42794 36 100.0 30 .................................... AAGAAGAACTACGGCTAATCGACCCAGAAG 42728 36 100.0 31 .................................... TGCCGGGGCTGGCGTAGCGTCCGCAATGTAG 42661 36 100.0 30 .................................... CAATCCTCCTACGGTTGATATTGACCCTAA 42595 36 100.0 30 .................................... AATAAAGATATCGCAGCGATTCTTGAAGCG 42529 36 100.0 30 .................................... GATACCACTTCCACAAGGCCATTAGACGCC 42463 36 100.0 30 .................................... ACTATTCAAGGTAGTATCGCCGGGCACTAA 42397 36 100.0 30 .................................... GCACGGGCTTTGAACGCTTGCGTAGTCATC 42331 36 100.0 30 .................................... TGTTACCTCGGAGAACAGTGCCCTTCTTAT 42265 36 100.0 30 .................................... TTGGTTCCCTCCACAATTCTTAAAGCATCT 42199 36 100.0 30 .................................... TTTTTCCCAGAAATGAAGACCGGCTACTTT 42133 36 100.0 30 .................................... CAAATCTCAATCAATCCAGCACCATCGCTT 42067 36 100.0 30 .................................... GAAAGACTATTGATGTGACTATCATTGGCC 42001 36 100.0 30 .................................... AGTTTGTAAAACGTTACCTAAATAACTAGT 41935 36 100.0 30 .................................... GTAACGAATGGCATCAATAACATGGTTATA 41869 36 100.0 30 .................................... TGGAGCGTAATCCATCGCTCCACGATGTAA 41803 36 97.2 30 ...C................................ TGTGGCGTTACCAATTGTGGAGGCAATTGC 41737 36 100.0 30 .................................... GTCACCATTAGGCAGCATGACCATTTCTTT 41671 36 100.0 30 .................................... CCAGCCGGACGATTAGTATTCCATTGTCAA 41605 36 100.0 30 .................................... ATTTTTAATCACAATTATCACTAACCTTTC 41539 36 100.0 30 .................................... TAAACAAGCATGGTTTCTACAGTGTTGGTG 41473 36 100.0 30 .................................... CATCGAGTTATCTAATTCATCACCAGCACC 41407 36 100.0 30 .................................... TTCGTAGTAGACCCAAATGGTGCGATAACG 41341 36 100.0 30 .................................... GCTCTAATCCCTTATGTGCCAGTTGGTTTG 41275 36 100.0 30 .................................... TTGATTATCAGCGCAGTAAATAGATACCGG 41209 36 100.0 30 .................................... AGCATACCAAGGATCGTTAATACGGTATTC 41143 36 100.0 29 .................................... CTATCAACCACCCATACTTCAATGGTATA 41078 36 100.0 30 .................................... CAACGAAGCACGAGCCTATGCGCATTACAT 41012 36 100.0 30 .................................... AACACAACTCGGTAACGCAGCTTATCTGGC 40946 36 100.0 30 .................................... AAGTCCTAGAACGTGACCATTACTTATGTG 40880 36 100.0 30 .................................... TCGCGTCGAAACGTAAATCTACAAAAGGTT 40814 36 100.0 30 .................................... CTACGCATTCCAATAAAAGTCTTCTCACCG 40748 36 100.0 30 .................................... TTTGCCACGGAATAAACGAATGCTGTTTTA 40682 36 100.0 30 .................................... TAAGCATAGTTAACTCTAGCAGTGAAATAG 40616 36 100.0 30 .................................... TCTGCCGTCTTCTGTGCGTATTTTTCCTGC 40550 36 100.0 30 .................................... AGAGGTTTTTACACAGATCAATATGCGCAC 40484 36 100.0 30 .................................... TAATGCTTTGAAACGTTTGATTACTGCCGT 40418 36 100.0 30 .................................... GATAAGGAAGACTTTAAGACGTTTAAGTCT 40352 36 100.0 30 .................................... ATTGTTTTTGAGAATATAAATCGTTTCCTA 40286 36 100.0 30 .................................... GCTTTAGTAGTACTTGTAGTCGTAACAGGT 40220 36 100.0 30 .................................... AAGGGTTCCCTGTCTTACTTCCTAGTAATA 40154 36 100.0 30 .................................... ATTGATTGAAGCAATAGCATTGCTTACTTC 40088 36 100.0 30 .................................... GAGAATACAATGTACAATGCCCAAATGAAC 40022 36 100.0 30 .................................... TAAGTTTATTCCTGATGGTGTCGTTGTCTA 39956 36 97.2 0 ..................................G. | T [39924] ========== ====== ====== ====== ==================================== =============================== ================== 99 36 99.9 30 GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGATC # Left flank : AAGCTGACTTAAATAAAATGTTTCAAAGCCAGTTGCAAAAACAGATAGCCACAAAATTAGATGATGAGACCCGAATGAAATTGACTGAGATTAATAACCAATTGAAATCACTGATCTTTGATGCAACGTTTTCCTTGGATCTTCCGTTAAAAGTGGATAGTGAATTTGATCCAGCTAAGTTAGTTAAATACTGTGATGTTGGCTTTGTAAGTGCTTTAAATAGGGATCCATATGGTATAATAGAAACTGTATTAAAAACTGCTTCAGAATTAAAAGAGTCTAAAATATTAGTCTTAACTGGTGTACGAAATTATCTCAGTGTCAGCCAATTTAATGAATTGGTGAGGTTAATTAGTACCCTTGATTTGAACACTTTGTTTATTGAATTCTCAGAAATAGATAATCATGAAGAATTTGATGAATGCCGCTATTACTACGTTGATCAGGATTTTGTTGATTGGCGTTACTAATACTTATGAGAGTAGCATTGCAAAAAAACG # Right flank : GGACCACATGGGAAATGGATAGCATTTGAATTGAACTGCACTAAAGTATAAAAAATAATCAAGGAGCCTAAAACATGGAAGTCACAGTAAAAGAATTTTCCCAGCTATCCAACCTAGAATTGTTTCAAATCTACAAACTCCGTACCCAAGTTTTTGTAGTCGAACAATTATGTGCGTATCAAGAAGTTGACGACGCAGACTTGATTGCGCAACATTTACAAGTTTTAAATGAAGATCAGCAATTAGTGAGCTATTTACGAATAATTCCGGAAACGGACAAAACTATTGTTCATATTGGTCGTGTAGTTGTTGATCCGCGTTTCCGTAAACACGGATACGGTCGGCAATTAATTGTGAGTGGCCTACAAACTATTCAAAGAGATATGCCGCAGGTGACGACTGTGAAAATTCAGGCGCAGGCTTATCTGCAAACGTTCTATCAATCATTTGGTTTTAAGCCGGTGAGTGAGGTTTATCTAGACACGGGGATACCACATTTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //