Array 1 10088-6845 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDP010000044.1 Clostridium estertheticum strain CF009 contig00044, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 10087 37 100.0 35 ..................................... TTATATTTAATGCCATTAACGGGATAAGATATATT 10015 37 100.0 40 ..................................... ATAGCTGTTTAGTTATGACTCCCGAACATATTGCAGAAAG 9938 37 100.0 35 ..................................... AAAATTAGTAGTGTAAAAGCTACTTTTTTTATTTT 9866 37 100.0 36 ..................................... TAGGTTGTGTAGCTTTGAGTGGTGGGGGTAAGGCTG 9793 37 100.0 37 ..................................... GAGGATAATGGAGAGTGTATGATTATAAATTCTACGG 9719 37 100.0 35 ..................................... TAACATGCTATCAAATGCCAGTAAGTCTGGTATTC 9647 37 100.0 36 ..................................... GGAATTACATAAATATTAGAGACATCTTGGAAGTTA 9574 37 100.0 36 ..................................... ACTGGTATGTCATTAACCCAACAAGGTGTAGATTTT 9501 37 100.0 36 ..................................... GAAAAAAATATGGGATGCAATTAAAGCTATTCCTTC 9428 37 100.0 36 ..................................... AAAAATGCCTTTTAGGTTTTTACGGCTTCTTTTATC 9355 37 100.0 34 ..................................... TTTATCCAAATAAGCCTGTTCAATCTCTTTGCCG 9284 37 100.0 35 ..................................... GCAATATTTTTAACCACAAAACGTGGAAATTGCAT 9212 37 100.0 35 ..................................... ATGTCTGGATTACCACCCATTCTTTCTATTTTCTT 9140 37 100.0 35 ..................................... ACTTTATTAGTTTCCATTAAAAATCACTCCTATTA 9068 37 100.0 37 ..................................... TCATAGTACCTGCTGCCATCCTCTACATACTTTGTAC 8994 37 100.0 36 ..................................... CAGTATATTTATATCCTATACATTTTTTAAATAAGG 8921 37 100.0 37 ..................................... AGATGAATGTAATAAGTATTGGGAGTTAGACCACTAT 8847 37 100.0 36 ..................................... TGATGCACATAAGAAATTAGTTTATTATTTGCTTGG 8774 37 100.0 35 ..................................... TCACTTTGTCCAGAGCAATCTAATAAAATTAATTC 8702 37 100.0 34 ..................................... ATTGTTTCTTGTTTGACTTGGCTTCATGGTGTTG 8631 37 100.0 36 ..................................... ACGAAACCGGCACGAGAGGTAATGGATGATTTAAAA 8558 37 100.0 37 ..................................... TGCGGGCTACTCGTGCTATTCGCACTACTAGGTATAG 8484 37 100.0 37 ..................................... ATTATATGATTAGTATCTTTTATAGAAGTATCTTTTA 8410 37 100.0 37 ..................................... AAAAAGATAGTGGATGCAGTCATTGAGGCAGAGGTAC 8336 37 100.0 34 ..................................... TTCTTAAGGGATTATAGGTATATCCTGCCTTAGA 8265 37 100.0 35 ..................................... TGATCTAATTTTACTATTATAAATGTAAGCTTCAT 8193 37 100.0 35 ..................................... TTGTATAGTTTTCTCTGAAGGTTGTCCATTACTTT 8121 37 100.0 38 ..................................... ATAATTATCAAATATAACTCTAATAACTTCCCATGTTG 8046 37 100.0 35 ..................................... TAGGATTTTAACCCGACACAACTACAAATAAAATA 7974 37 100.0 36 ..................................... AGACCTAATACAAACGGATGATGCTGATTTTGGAAC 7901 37 100.0 37 ..................................... TCCGTAGCTAACTTAACAAGAGGAACACTGTCTATAT 7827 37 97.3 38 ...........T......................... AAAGACTCACTCAATAGTGGGATAAAAAAATATAATAA 7752 37 97.3 36 ...........T......................... TGAATAAGTTCAGTTACATAAGGATCATCATCTTCA 7679 37 97.3 36 ...........T......................... ACTAATAATTATTTCACACCAAATGCTATAAATTTA 7606 37 97.3 35 ...........T......................... AACAACAGATACTACCTTACTGAATGAGGTAGTGT 7534 37 97.3 36 ...........T......................... AAAACAATACGAAAGCATAGGACAAAGAGTAATTAC 7461 37 97.3 35 ...........T......................... ATAAGATACTCGAAAGGTTATAGTAGTTTTGTATC 7389 37 97.3 36 ...........T......................... TTAGTTATATAAGCACCAACATTTTTTATACTTTTA 7316 37 97.3 37 ...........T......................... TTGTTTTAGACTCACACCCAAAGATTTTAAGTTATTG 7242 37 97.3 34 ...........T......................... ACATCGGGTTGTAAGTATGGGTGTCCGTTTTTGT 7171 37 94.6 35 ...........T.C....................... GCAGGGGCTAATGTTGGCTTAATAGTTATGCTAAC 7099 37 97.3 35 ...........T......................... GATACAATAAAGATTGATCCTAAATTAGGAATTGA 7027 37 97.3 36 ...........T......................... GGTGTTGCTTCTTTAGTTTCTACGCTTCCAGTTTTT 6954 37 97.3 36 ...........T......................... CAGATGTGATTTTTGATAAGATTTCTGCATTATCTG 6881 37 97.3 0 ............................A........ | ========== ====== ====== ====== ===================================== ======================================== ================== 45 37 99.1 36 ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAAC # Left flank : GCATTGATGGAAGAAATTGAATATGTACCTTTTTTAATTAGATAACAGCAAAGGAGTATGTTATGATATATTTAGTTAGTTATGATATAGTTAATGATAGAAAGAGGACTAGACTTCATAAAATGCTGAAAAATTTTGGTGCTAGAAACCAATTCAGTGTTTTTGAATGTGATTTAGATGGTAAAAAATATGTTGAGCTTGAATATAAAATAAGAAAGATTAAAATTGAGAAGGGTGACAGCATTATGGTATATCCTATATGTTCATCTTGTGAATCTAAAATTATAAGAAGAGGTATATTTGTTCCACTTGATGTTACAAATATGATTTATTAAAGCGCAGGCCTATGTGTAATTAAAACACCGGTACCCTGGCGATGCTTTAGAATAGGCACTTGAGAAGCAATTACTATAATATCTTGTGCAAATATTTAATGGAAAATGATACTTGGCGAATAAGGTGCCTATAAACCAGTGGTTTCAAGGGGTAAAACGCGAGCG # Right flank : AATGAAATCATTATCGGTTGTCTTCCATACCTGATTACTTTGAGTCAATATTACATTTTGTTACAATATAGGTCTGCGAATTTTTCAAATGGCATTACTCGTTTTATAATCTGAACTTCAAGATAAATAACAAAAGATCTAATAGCTACACTGAATTTTATAGCATACTAAATTATATTTATGAAAATTTAATGAAAGCTATTAATATAGTTTTATCAAAACCTCATCATGAGCTGATAAAAGATAGGAGGGTATGTAAATACCAAAGCTTAAAAAACACAAGTATGGATACTATAAAGTGGCTTGAGAAAAGGCCTCATTTATTAGAATATATAGATGGTAGAAACATTCCAACTCAGGCTTTACAGGTAACTAAAAAGGTAACACTCGACACTAAGGAAAATAGATTTCTAAAGTTTATGATAATAACTATAATTCATAAGATAGATAGTTTTATAAGAACTTATACATCAACACCTTGGAAAAAGAATGAGGATATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACTTAAGACATTAAGCTCCAATGGAGATTGAAAC # Alternate repeat : ATTACTTAAGATATTAAGCTCCAATGGAGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //