Array 1 52297-50928 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBR01000001.1 Streptomyces griseosporeus strain JCM 4766 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================== ================== 52296 29 96.6 88 ................T............ ACGGAGGCCGGCCGGAAGAACGGCGAGGCCATCTGCTCCCCGCACCCGATGGTCCCTCCGGGCGGGCGCCCACATCCAGACCCAGGCC 52179 29 93.1 32 ..T.............T............ TGCGGAGGGGGATCTCGTGCGGCCACAGCGGG 52118 29 96.6 32 ................T............ ATGCTGCTCACCAAATGGCCGGTCCGGCGCAG 52057 29 96.6 32 ................T............ AACCCCCTCCCGCTCAGACGTTCGCCATGCAA 51996 29 96.6 32 ................T............ AGGTTCGCCACCAGCAGGGGGAGGTCCGGGTT 51935 29 93.1 32 ............G...T............ TGCACGGCGGCCTCCTACACGAGTTGCACCTC GG [51912] 51872 29 96.6 32 ..T.......................... ATCACCGCGCCGAACAGCGTCACCGTCACCGA 51811 29 100.0 32 ............................. TGGACGCTGCGCAGGTTGCCGAGCCCGGTGGA 51750 28 96.6 31 ........-.................... TGGCCGCGATCCTGCTCGTACCAGTGGGCTT 51691 29 93.1 32 ...........G................G CAACAGGCCCCGCCGAAGCGGGGCCAGTACGT 51630 29 100.0 32 ............................. GAGGAGGAAGGCGAGGAACTGTTGGACGGCCT 51569 29 100.0 32 ............................. GACCGCACGGTCCCGCTGATCTTCTTCGACTC 51508 29 93.1 32 ...........G...T............. GCACGTCCCTGTGGCGCACCAAGCCAGAGGCT 51447 29 96.6 32 ...........G................. TTCTTCCCCACGGTGGAGGTCACCCTGCCGTG 51386 29 96.6 32 .........................C... CAAGGTCGGTCATCCTCGGGCACCCCCGCCAG 51325 29 100.0 32 ............................. AACGGCATGCTCATCGGCGTCAGCGTCCTCGG 51264 29 100.0 34 ............................. CCCCCCACTTGATGCGGTCCTGTCCCTCCTGGTC 51201 29 96.6 32 .................A........... CAGGACATCGGCACATCTTTCGGTCGTGCGGA 51140 29 96.6 32 ......................A...... CCGACAGAGACGTGAATCTTCTCGGGGAGCGG 51079 29 100.0 32 ............................. CGGGTCTCCTCGGTGGTGGCCTGCGCCCGGAG G [51051] 51017 29 100.0 32 ............................. TCGATGTCGACGGACGGCTTCGGGCCGCGTCC 50956 29 96.6 0 ...........G................. | ========== ====== ====== ====== ============================= ======================================================================================== ================== 22 29 97.0 35 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TGCGGCCTCCTCACCCTCGCCCCCTTCACCCATCCCACACCGAAAACGCCATGAGCACACCCTCCCAGCGCCCGGCACTGGCCCCCCGCCAGCTCACCCGCACCGACGAACGCCTCTCCTTCGTCTACCTAGAACGCTGCACGGTCCACCGCGACGCCAACGCCATCACCGCCCAGGACGCCGAAGGCACCACCCACATCCCCTCGGCGACCATCGGCACCCTCCTTCTCGGCCCCGGCACACGCGTCACCCACCAGGCCATGAGCGTGCTGGGCGAGACCGGAGCGGCAGTCTGCTGGGTCGGCGAACACGGCGTGAAACGCGACCTCCGCCGGGCCGGCTCCTCAGAACGGGCCACCATCCGGCTGGAGGAGGGCCGCCAAACGCCGACGCTTTGGGAGAGGCTGATGCACATCAATGAGCTTTTGTCTCATTTATCGAAGTCGGAGAAAGTGCTCGGAAACTGCCCCCAGCGCCCGTAAAACCGCAGGTCATTCAGT # Right flank : CAGCGTGCCCTGCGGATGCGCGACATGGGCGCGGCCGGTACGTCGTCCCCGCGGCGTCGTCAGTGTTGCGCGCGGTCCTGCCACCCGCCGCAGATCAGGCGGCGCGCTGGGGAGGTTTGGTTCCCCGGGAATTCCGTATCCTCGCTGGTGCCCGGCCGACCGGTCCCCTTCGGCGTAGGCAGTGCCGTAAGTCCTCGGCGAAAGGCCCCGCGCAGCAGGCGGATGATGCGACGCAGCCGAGGGCCACTCCAGCGACCGACAACTTGAACGCGACTCTGCCCGGTGCCTCGGGCGGCGGTCCGAGCCGTTCGTCGACGTGGCCGCGTGGATCGACTGTTACGACGACGCGCGATCCTTCAGGCGACTGCTCACCCTGTAGCTGGTGTGTGGTTCCGTCGGGCAGCCGTACGACCACCCCGGAGGCGTCGCCGTCCGGTGTCGACAGATTCCACTGCCGGGTCACGACCCCGATCACCGGGACTCCGCGGTCATGCAAAGCC # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.19, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 61034-61934 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBR01000001.1 Streptomyces griseosporeus strain JCM 4766 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================== ================== 61034 29 100.0 32 ............................. TGCCCGTTCCAGGAGGCGGTGACCCCGCCGAG 61095 29 100.0 32 ............................. TACGTCGGCCTGGTGGTCGATGCGACCGCCGA 61156 29 96.6 32 .....................G....... CATCCGGCCGAATGCGGAGTCACAGTAAGCAC 61217 29 100.0 32 ............................. AGCGCCCGCATGCGCTGTTCCTGGGCGACGGC 61278 29 96.6 32 ......................C...... GACGCGCCCGACCTGGACGAGAAGCCCGCCGC 61339 29 100.0 32 ............................. CAGGCGGCCGGCACCGATGCCGTCCGCACCGT 61400 29 100.0 32 ............................. TCCGGGTGCGGCCCGGCCCCGACCGCGCCGAG 61461 29 96.6 32 .............T............... GAGGCGGAGCCCGGGCTCCAGGTCGTCGATGC 61522 29 89.7 32 ...................TA....C... TACCACGTCTTCGCCATCGGGGTGGACGCTGG 61583 29 93.1 32 ............G...........A.... TCCGGGTCGACGTCCGCGGCCACCTCGAACGT 61644 29 100.0 27 ............................. CACCGCTCCGAGACCGCCCTCGGCGTC 61700 29 82.8 32 G.C..G..................AC... GATCAGGCCTTCCCCCGCCCGTACGTGGAGGT 61761 29 93.1 56 .................A......C.... ACCTGCATCCGCGGGGATGGTCCCTCGACGAGCGAGGCGAGATCCTCGCCGCCGCA 61846 29 100.0 31 ............................. ACCCGACCTCCCTTCAGCACGCCAGCCTCGA 61906 29 72.4 0 .......T..TG.AG.......AC.G... | ========== ====== ====== ====== ============================= ======================================================== ================== 15 29 94.7 33 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGAACGCCGGCGTGGCCTTGCCGATGTCATGCACACCGGCAAGCCACACAGCGAGGGCACGTGCGTCCGCATCACCCTGCGGCAAGGCCTCGGCCACCAGACCGCGCGTCCCTACCGGCAGCCATCGGTCCCACAACAGGCCCGCCACCGCAGCGGCATCCTCCATGTGCCGCCACAACGGCAACCACCCATCCGTGTCCCGGTCATACTTCGCCCATACCGACCGGGCCGACCCCCCGAGCCGGCCCAACAGGCCGGAACGAGCACTCCCATCGTCGCTCATGAGCGATTGATACAGGCAGCGACCACCACCTCACACCAAAACAAGCCAACAGAAGCACCTGCAGGTAAACAGCCGTCACCGTCACGTAGGATCACCCGTTCCCCGCTCCCGTGAGAACCATCCGCGAGACCGAATGCCTCAAATAGCCGACTTGTCGGAATGCATGATAGTTACAGAAAACGTCTCTCTGCGGCGATAAACTCGCAGGTCAGCAAGT # Right flank : CTGCAAACGGCTGCCATCCAGCATCTGCTTGTCAGGGGGTCTGCCAGGATGGCGTCATTCGCGGCAATGAGGGGTGCGAAGGTGACAAGACAGGACTTGGCCGATGCGCTAGATGCGGAGCTATGCAAGCAGTTACTGCCGGCCACTGCGATTGACGCTATCGGCTGCTGGCTGTCCCGAGATGGTTCCCGGTATGTAGCGGGCGTTGGCCGTCATGCCGTTGCGTACGTGCCAGCGCGTTGGGCGCGTATCGGACCGTGGCCAGAACGGTTCGCGGATCGGGGTCAGGAGGCTGTTGCTCTGGTCAGCCGGAGCGAAGTGGTCGCCGCAGTTCGTGATGCAGTTGAACGCGAAGCGTGGAGTGAAGCCCTTGTAGCCTCATACGTGTGGGGCCAGGGGAGAGCCGCATACGGACCCCATCGCCTGGAGGGCATTTTGGAGGACGCTGGGGTCAACACGGTGATAGAGCGAGCTGTGACAGCGCTGGGCAAAGAGGACGC # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.06, 8:1, 9:0.76, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 62884-64240 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBR01000001.1 Streptomyces griseosporeus strain JCM 4766 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================== ================== 62884 28 79.3 33 ...T.......GT.GT.........-... GGCGGCGCTGGCCTGGGCAAGGTGGTGCCCCGG 62945 29 100.0 32 ............................. GACATCCTCAAGGCCCGCGCCGAACGCGAACG 63006 29 96.6 31 ......................C...... GCAGCGGGTACTGCCCCGGGCGGGTCTGTCC 63066 29 100.0 30 ............................. GCAGCGGGTACTGCCCCGGGGGGTCTGTCC 63125 29 96.6 32 ........T.................... CACGTTTTCCGTGACGCCGGAGAGCGGCACGA 63186 29 100.0 88 ............................. ACACGCGGATCAGGTAGGTGGCGATGGAGGACCTGCTCCCTGCACCCGGATGGCCCCCTGGCAACCCTCGTCCACGTGACGGACGCCG 63303 29 96.6 32 ..............T.............. TTCGGCATCGCGCACGGCGTGGCCGGACCGCT 63364 29 100.0 32 ............................. TTGCTGTACATCGGGCCCTCGACGACGCCCCT 63425 29 96.6 32 ..............G.............. GTCATCACGGACGGCCGTAAGGCCGCCCTGGA 63486 29 96.6 32 ......G...................... TACCGGATGAGCGACGGTGACCGCCAGGCGGT 63547 29 89.7 32 ........G.G..........T....... TCGGCGCCGTCGAGGATCTGGCCGTTGTGGTG 63608 29 93.1 32 ...T...............C......... CTCTCGGAGGTCGTGGTTCGTGCCGAGGACAC 63669 29 93.1 32 ....................A.......T GTCGGCATCGCGCACGGCGTGGCCGGACCGCT 63730 29 96.6 31 ...........................T. GGCCCTGCGTGTCCTCCGACGGCCGCAGCGT C [63739] 63791 29 100.0 32 ............................. ACCATGGCGAACATGCCGAACTGCTTCGCCTC G [63812] 63853 29 93.1 32 .....T.....................G. TAGCACGGCTACCCGGACGCGACTCCGGTCGC 63914 27 79.3 28 G....T.....G.--.........A.... ACGGCTGTCTGGGCGCCGGGCCATCGCG 63969 29 93.1 32 ............T..A............. CAGGAGATCCGCGACCAGTTCAACAGCATGTT 64030 29 89.7 32 .......T.....G...........C... GACGTGAAGGACGGCATCCGTTCGGTGTCGAT 64091 29 89.7 31 .............G............TA. GCGAACGCGCCGCGCTGGGGAATTCGGCGGC 64151 29 100.0 32 ............................. CAGACGGTGTTGCACGACCAGCCGATGTACTG 64212 29 75.9 0 ....C.T.....G.T....A.....C..A | ========== ====== ====== ====== ============================= ======================================================================================== ================== 22 29 93.4 34 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GTCAACACGGTGATAGAGCGAGCTGTGACAGCGCTGGGCAAAGAGGACGCAGTCGCCGCCTACAGAACTATGCGAGGAGCGGTTCGAGGCCTGGGTCCTGCGTTTTTCACCAAGCTCCTGTACTTCCTGGCTCTGGCCCTGGAAGGTTCACGCCCACCTTCTGCGCTGATTCTTGACCAACGGGTCGCGCGGGTCGTGCGAGCCCATGCAACACAGGTCGGGATCGGCATGTGCCTTCCCTCCCCTGTGGCAACGGCGGCATGGGCTTGGTCGGACGGCGGCTGGACTCCACACCGGTATGGCGTTTACCTGCGGTGGATGACTGCCGCAGCCAGCCAGCTTGTCTCGACCGGGGTCAAGTGGCCAGATTCGCTGAGCCCGGACCTGCTCGAGCTGGCGCTCTTTAGCGGAGTTTGGGATCCAACCGACTGAGACCCTGTTCTGCTCTTCGCCCTTGGGACGGCTCCCTGAAGCGGCTCCGGGGGCGACGGCACCGGCGT # Right flank : AGAGCTTGTCAGACCGAAGAGGTACGGTCCGCCCCATGGCTGAGAGACCGACGGAAGCGGGTGTAGAGACCGCCGGCCAGAACGGAAGCGCCTCGGCAACCGACGAGAGCGAGGGACTGCGGGACTACATAGACCAGAACATGACCGAACACGATGTCGACATCGTGGCGCTATCGCTGGGCAGGGAGGCTGGGCCCGATACCAGCTCAGCGGCGCCAAGTGAGTGTGAGCGACTCTGCAAGACGACCAGCGGCAATCCAAGGCTAAGAGTCCGTAACACGATCTTGTCGAGGCGTGCTGGCCGGGCGTGACCAGTAGGACGCTTCTGCCGTTCGTGAGGTGTGGGGAATCGGCCGTGGATCGTGGACGACGAACTGTGGGCGCTGATCAAGCCGTTGCTGCCGACTTGGCCGCAGAAGGCTCCCGGCCCGAAGCCGGTGGACGACCGGCTGTGCCTGTAGGGCATCCTGTACGTGCTCTACAACGACATCAGCTGGCAA # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-24] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //