Array 1 70564-75880 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJVAS010000012.1 Paenibacillus solanacearum isolate CIP111600, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 70564 32 100.0 34 ................................ AGAACAATGTGCAAATCAACCGAGCTTTACAAAA 70630 32 100.0 35 ................................ TTCTTTCAAAGCATTTCTAGCCAAAATGTAGTATG 70697 32 100.0 33 ................................ ATTTGTAGGTGCGGCACCAACGAGTATATTAAT 70762 32 100.0 33 ................................ AACAAATCGAAGCAATAATCAGGGCGCAGCAGC 70827 32 100.0 34 ................................ GATGAAGTTTACTCCATACCGGACAAAGCCGGGG 70893 32 100.0 33 ................................ CTCCATGGATATCCCTAAAGTATTGGCAACAGG 70958 32 100.0 33 ................................ CTTTTCCGTTTGGAGGTCCTCCAACTCTTTCTC 71023 32 100.0 35 ................................ ATAAAGTTAACACATTGGAGGTTTGAAAATGGCTG 71090 32 100.0 34 ................................ TGCTCCAAGATCATGTTGTCTGAAAGCTTCGCCG 71156 32 100.0 35 ................................ ACCCTCTTTAGTTTCATGTCGCAATACTCCAGTTC 71223 32 100.0 35 ................................ TTTTCTAGCAGCCAGGCGCCGACTTTGTGCATCAG 71290 32 100.0 33 ................................ ACCAAGTCCTGCATACGGGTCATGAGCTGGTCT 71355 32 100.0 34 ................................ ATTTTGTTACTTTGTAATAAGTAACTGTCATATG 71421 32 100.0 35 ................................ GAAAATTACCAAAACAAGACGCTTCGGATTATTCG 71488 32 100.0 35 ................................ ATCGCATAAAGGATTTGATCGACCGCCGCGTTCCC 71555 32 100.0 35 ................................ GTCATCATGCCTATTGCGTTCGCTCGGTCGGTCGG 71622 32 100.0 34 ................................ TCGCGAATGGCAACAATCCAAGCCTGCCCCGCAT 71688 32 100.0 33 ................................ CGACAACGGCATACACGCTTTTCTCGGCGGGAA 71753 32 100.0 33 ................................ GTCTTTGTCCATGCGCTTTTTGCTGCCCTTCTC 71818 32 100.0 35 ................................ AATTATCTCGGTGCCGGTATCGGCGGGGGTATTAC 71885 32 100.0 34 ................................ AACTTTGTGCCGTGCATGTCCGTAACGGCCCCGG 71951 32 100.0 34 ................................ ATTAGCGGCGCGACGCAATGGCAGCTAATGCTTA 72017 32 100.0 33 ................................ CGATAGGCAATGTATCATCAAACGAAATCGACA 72082 32 100.0 34 ................................ AAATCCCGGCTGCAACCTTTGGCACCGCTCAGCC 72148 32 100.0 34 ................................ ATAAAACGAGTGGCGTAAGCGAGATTAGAAACGC 72214 32 100.0 34 ................................ CATATTGGGAGACAAGAGCGAAGGAAATCATGAT 72280 32 100.0 34 ................................ ACAATTAGTCACGGTAAACGGCAAGCAAGTCAAC 72346 32 100.0 33 ................................ CATATATAAGACATGACCCCGTTAGGGCCGCGA 72411 32 100.0 34 ................................ ATGGGGTCTTGCGCTCTTGGGTATCTCCATTGTC 72477 32 100.0 34 ................................ AGCATCCTGAAAGGCGTGTTTGCTGCCGCTTCCA 72543 32 100.0 34 ................................ ACGAAAACGCCGTTAAAGCCGGATGACGTAATAA 72609 32 100.0 36 ................................ GCCTTTGACAAACTTAAAGACGCAGGAAAGGCCATG 72677 32 100.0 35 ................................ CAAAGTTGAACGCTTTTTCCCACCATGATATATCA 72744 32 100.0 32 ................................ GTCCCGCCTATACCCGAAACACCGGAACCACC 72808 32 100.0 32 ................................ GTCCCGCCTATACCCGAAACACCGGAACCACC 72872 32 100.0 33 ................................ ATTGTTATGAAAATAATTAATGTAAATGGGAGA 72937 32 100.0 34 ................................ ATTATCAGTTTTGTCGCTGCTGGCGAATATGCAT 73003 32 100.0 34 ................................ ATTTATGTCGGCTACGATTTGTCCAACATCTTGG 73069 32 100.0 34 ................................ CATGGCCGCACCCCATCCAATAAACTCCCGCTAG 73135 32 100.0 35 ................................ TGTTGCGAAAACGGGGATACTCCACTTTTCTGCTA 73202 32 100.0 34 ................................ CGACACGATCCTAGCGGCGTACAAGGATGCTAGG 73268 32 100.0 35 ................................ AACAAATCGAAGCAATCATTAGGGCGCAGCAACAG 73335 32 100.0 37 ................................ GAAACAGGGGCGAGTAAGATGACACATAAAATCTCGC 73404 32 100.0 34 ................................ GGGGAAGTAGCAAAGGAGTATGGGCTTTTCGTGG 73470 32 100.0 35 ................................ TTGACGCGATCAAGGCATACAAAGGCAAGGAAGCC 73537 32 100.0 34 ................................ GTTCATCATGAGCCGGTAGTAAATGTATCCGGGC 73603 32 100.0 34 ................................ AAATCGTCGGCGGCTCTGTTGCCACGGCCAAAGA 73669 32 100.0 35 ................................ CGGCACGATCCTAGCGGCGTACAAGGATGCTAGGC 73736 32 100.0 34 ................................ ACTGCCGTTCCAGTTTCTTCAACATGGAGTTATC 73802 32 100.0 33 ................................ TGATATATGGCGGTGGGACGGAACGAAATTTTC 73867 32 100.0 34 ................................ TGTTACAACCTTGGACAAGGCGGCTTAAAAGAGC 73933 32 100.0 33 ................................ TTAACCCAACGCCGGTTGTGGAGCAATTAAAGG 73998 32 100.0 33 ................................ CTAAAAATGCTTGCAAAATAATTATCCATGTAT 74063 32 100.0 33 ................................ AACGTTCGCAACGCTGATGACTCAGCCATTTTA 74128 32 100.0 34 ................................ TAGGTACGCTCTCCGCTCGTTATCGTCACGTATG 74194 32 100.0 35 ................................ AGACATGTAAATATTCGCATTATGCACTTGTCCCA 74261 32 100.0 35 ................................ ACGACAGCAGCTTTCGCTAGTGCTGGACTATTACA 74328 32 100.0 34 ................................ ATCCAAAGCCATGCCGACGTGATTAGCCACGCCA 74394 32 100.0 35 ................................ TTGATTATGGTGATAGCGTGTTATTCGTCCTGATC 74461 32 100.0 34 ................................ CATCCCGTACAGTTTTTTTTGATTCGTCGGAAAT 74527 32 100.0 35 ................................ CCATAAGTTTAGTTAGACCTTCGCTCGCGTACTGC 74594 32 100.0 37 ................................ ATCCGGATATCTTTAAATTCGGTTATCGTAACATGCC 74663 32 100.0 34 ................................ TAATTCGCGCTTGTGGCGCTTGAGATCCTTTTCC 74729 32 100.0 33 ................................ ATACCCCCTTATGTGCTTCGATGTTCAAAACTG 74794 32 100.0 34 ................................ ATCAGGCTGTAGTCCAGCATGTTCACATGCGTTC 74860 32 100.0 33 ................................ TTGGCAATCGGGCAGGCAGCCAGAATGATGCCT 74925 32 100.0 34 ................................ AAATCCGCAAAGAGGACAACGTAAAAGTAACTTC 74991 32 100.0 34 ................................ TCCTGCAAGCTTTGCGGCAGTTTGTTCCAATGAT 75057 32 100.0 34 ................................ TCTGCTTCTAAATCAGCACGGCTTTTGCGGAGGT 75123 32 100.0 34 ................................ GTATTAACGCTTCCGCGCCGGGCGCGATCACGGT 75189 32 100.0 33 ................................ TCATCACGCAAGCGCCCGCTAGCATCACGCCAT 75254 32 100.0 34 ................................ GCACACATGCTTTAGCCAGCATGCAGCGCGGCTT 75320 32 100.0 35 ................................ TTTCATATGCTGCTGAATCGATTCATGCCGCGAAC 75387 32 100.0 34 ................................ AAGATCAGAATGCAGATGGACCCGGGCAGGGTTA 75453 32 96.9 33 ............G................... GTGAAGAATTGGAAAGGGATCGTTAAGTTTATC 75518 32 96.9 35 ............G................... TCCATCGGCGTCGAAAGGGTGTCGAAACTGGATTG 75585 32 93.8 34 ............G......T............ CGGCGATTGTATTGCACAGAGCAAGACGGATAGC 75651 32 93.8 34 .........C..G................... CATCTTGTGTTGTGTTTGTCCATCCGCACCGATT 75717 32 93.8 35 .........C..G................... AAAAGCATGACCGAAGTTGTTAAGGCCTGGCTGTT 75784 32 96.9 33 ............G................... CATGCCGCCCGAGCTTTGCAGCCGCATGAATTG 75849 32 96.9 0 ..............................C. | ========== ====== ====== ====== ================================ ===================================== ================== 81 32 99.6 34 GTCGCATCCTTCACGGATGCGTGGATTGAAAT # Left flank : TATCCTCCATTTATGTGGAAGTAGGTGCATCAATGCTGGTATTGATTACTTATGATGTAAGTACCACAAGCAGTGCCGGACAAAGAAGATTGCGCAGGGTTTCGAAGGCATGCCTAGGTTATGGCCAAAGAGTTCAGAATTCTGTGTTCGAATGTAATGTGGATGCAACTCAATTTGCCACTCTAAAGCTCAAGCTGATTGATATTATTGATAAAGATCAGGACAGCCTCCGATTCTATCAGTTGGGAAACAATTACAAAAATAAGGTTGAACATATCGGCGTGAAAGAATCAATCGATTTAGAAGGACCGTTAATTTTATAGTGCGAATGTATAGCGCGCATAGTTTTCCGGGGACATTCGCACCGAATTATTAACAGTTTTATTCCAAAATTTCCGACTTTGATATTTATAAATGCTAAAGTTGGAATGAATGGTCGTGTTTTTGACTTTTTCGGTCAAAAATATGACCGATGGGAACATCTTTATTGACTTTTCGCA # Right flank : TACCATCTTATCGATCATCAGTCCATGCAGCTCTGATCTGCTTGTCCATGTAAAAACGCCTCCCGGCTCCATAGCCGAAAGGCGTTGCGCTTGACGGGTATTCATTTTAACCTTCGTTACCGCTTCGCCTTATAAAACTCATGATACAGCTTCATCAGCGCCCGCTTCTCGATCCGCGACACGTATGAGCGGCTGATTCCCAGTTCCTTTGCAATCTCACGCTGCGTCCGCTCCTCGCCCCCGGCTTCCAGTCCGAAACGACCGACGACAACTTCCCGCTCCCGTTCATCCAATATATCCAGATTGCGGTATATTTTTGACTTTTCGATCTTGAGCTGCACCTTATCGACAACATCGTCGGCCTCGGTGCCGAGAATATCGATGAGCGTGATCTCGTTGCCTTCCTTATCGGTCCCGATCGGATCATGCAAGGAAACGTCCTTGCGCGTTTTTTTTAGAGAACGAAGATGCATCAGGATCTCGTTCTCTATACAACGTGC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTTCACGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //