Array 1 1353883-1351074 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031124.1 Ephemeroptericola cinctiostellae strain F02 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1353882 36 100.0 30 .................................... TTGAAGGCAAACTTTAATACCATCAATTGA 1353816 36 100.0 30 .................................... TAGATAACGAGGCCTGTAGCGACGAGGGCC 1353750 36 100.0 30 .................................... TCGGTATACTGGGGAAGAACGTGGAGGTAT 1353684 36 100.0 30 .................................... TGCGCTGACAATGTGGACAAGACAGTTAAA 1353618 36 100.0 30 .................................... TGCGCAGCGGAGCTTTACCACCCGCTGACT 1353552 36 100.0 30 .................................... TAAGTTGCTAAACATGTCACCGTTGGTTTT 1353486 36 100.0 30 .................................... GTGCGGTCATGCGTTGTGTGTTTTGGTTTG 1353420 36 100.0 30 .................................... ATTGTTTTTGGTGTCCTTGTGCCGGTAATA 1353354 36 100.0 30 .................................... AAATTCAGCCTCTCGGTCAAACAGCATTCC 1353288 36 100.0 30 .................................... CGTATCAAGCGCAAGACGGGCAGGTCATCA 1353222 36 100.0 30 .................................... TCATGCACCGGCGCGGCTGCACCCACAGTC 1353156 36 100.0 30 .................................... TGGAGGTGCCGATACCCAAAAAATTGATCT 1353090 36 100.0 30 .................................... CATGACGCCTTATTCAAGGACTGAGTTTTA 1353024 36 100.0 30 .................................... TTCGCCGACAGTTGGAGGATTCCATGTTTT 1352958 36 100.0 30 .................................... AAAAGCAACGGGCAGGCGGTGCTGCAGTCT 1352892 36 100.0 30 .................................... TTTAATTAGCTTAACAACAGCAGCTAGTTT 1352826 36 100.0 30 .................................... ATTTAGAGGCGCATCATCGCGGCGACTTGC 1352760 36 100.0 30 .................................... CCTGGCGTGCGGGCGCAGTGATCACGCCAA 1352694 36 100.0 30 .................................... TTAAACGAACAAATTAACCACCACCAATCA 1352628 36 100.0 30 .................................... TGACCGACGAAGCGCAGCGCAATGGTGCTG 1352562 36 100.0 30 .................................... ATGATTGGCCAAACCGACAAACTGAATCGC 1352496 36 100.0 30 .................................... ATGATTGGCGCACAGTTGAAAATGATTACA 1352430 36 100.0 30 .................................... AATCGGCAGCGGAGTGCGTACCGTTGAGGC 1352364 36 100.0 30 .................................... CAAGCGCGATGCGGGCATTCTCAATGCCAT 1352298 36 100.0 30 .................................... AAAAACAGTCATATATTTATCAGCCACTGT 1352232 36 100.0 30 .................................... TAAATCGACTGTACATCTAGATAATAATGG 1352166 36 100.0 30 .................................... TCGTTCTATGGGGGCGCGTGAAGATTACTG 1352100 36 100.0 30 .................................... ACCGAAGGCTTCCCAGTTGTTACAGAGCAA 1352034 36 100.0 30 .................................... TGTCGGAGTGATACCCATTTCAATGAGTAT 1351968 36 100.0 30 .................................... AAGTAATTGCCATTGCCATCAACCCCGCCA 1351902 36 100.0 30 .................................... TTATTGGGCTATCTGCTGTAGGCTTATCGT 1351836 36 100.0 30 .................................... TTAAACGCTCAATTTTCGACGAGAGCGCAT 1351770 36 100.0 30 .................................... CAGAGCTGGTTGAGCGATACACCCAGCAAT 1351704 36 100.0 30 .................................... TCGGCAGGTGAGTCGGAACTTTTCGGCAAT 1351638 36 100.0 30 .................................... GGTACCGTGCCGCGTGGCTTGATAAACCTC 1351572 36 100.0 30 .................................... TGAGTTTGGCGATTGCCGCACGGGCGAAAA 1351506 36 100.0 30 .................................... GTACGACCCTCATTGATTTTGCACAACGGT 1351440 36 100.0 30 .................................... CATCCGGTTCAGTTCGGGCACGTCTTTGAT 1351374 36 100.0 30 .................................... TGTGGTTTTGATGCTGGCATGCCCGCACAG 1351308 36 100.0 31 .................................... CCATGTTCGCGCAAGCCATTGCAGCCAGCGC 1351241 36 100.0 30 .................................... TTTTAAGCGTTAAAGTGAGTTGTTTGTTTT 1351175 36 100.0 30 .................................... TGCGTGCTTGCTTTTCTTGATCTATTTTGG 1351109 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 43 36 100.0 30 ATTATAACCGATTGGGATATGGGTACTGGCTGGAAC # Left flank : TGGCACAAGTGTATTTGGGCGAGCGCGACAAACTCGACTTACCATTACAAGGCTTGCCATTGGATTTGGCGAGCAGTTTTTTGGATGAATAGCATGGAGGCATTATGTTATCAGGATACAGACTCATGTGGTTAGTCGTCATGTTTGACCTCCCCGTCATCGAACGCGCCGAGCGCAAAGCAGCCACGGCTTTTCGCAATGACCTACTCGATATGGGTTTTGAAATGAGCCAGTTTTCGGTGTATGTACGATTTTGCAGCGGCCCTGCTCAGGTTGAAAATTATTGCAACCGCATCGAAAAATTCTTGCCCGAAGGTGGTAAAGTCAGTATATTGCAATTTACCGACAAACAATACGAGCGCATTATTTCCTACAAAGGCGCAGCCAAACAAGCCGCGCAAAAACCACCTGACCAATATGATTTATTCTAAAACCACCACCATTTTTTTGAAACTGAAATGCCAAAAAGCCCTTGAAATTCAAGGGCTTTTGACTGGTCT # Right flank : AGCAATCACAAATTAATAAAAAAAGCGAGACCAAGTCTCGCTTTTTCAACAAAATGATTTGAGGCATCACCACATTACTTGTAGTTTGCAACGCCTTCGTTGATTTCTTTGTGCGCTTCATCCACATCGCCCCAGCCTTGGATTTTCACCCATTTGCCTTTTTCGAGTGCTTTGTATTGCTCAAAGAAATGTTGGACATTGTCTTTGATGTATTGTGGAACGTCAGCAATCGCTTTGATGTCGGCGGTCATTGGGCATACTTTGTCAACAGGTACAACGATGAGCTTGGCGTCTTGGCCTTTTTCATCGTCCATTTTCAAGATGCCTACAGCGCGGCAGCGCACCACTGCGCCCGCCATGATTGGAAATGGTGCGAGGACGAGTGCGTCAACTGGGTCGCCGTCGCCTGCCAATGTTTGTGGAATGTAGCCATAGCTCAAAGGGTAGCGCATGCCGGTGCCGATGAAGCGGTCAACCCACAATGTTTGTGTGTCTTTGTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAACCGATTGGGATATGGGTACTGGCTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1417098-1418124 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031124.1 Ephemeroptericola cinctiostellae strain F02 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1417098 36 100.0 30 .................................... ACAAAAACACCTGTTGCATTGATGACCACG 1417164 36 100.0 30 .................................... TGCGGACTTTAGCCATGAGGGCCACCCGTC 1417230 36 100.0 30 .................................... TGCGATTGTGGTCATGGTGTGTCCTTAAGC 1417296 36 100.0 30 .................................... TGTACTGCTTGTCAAAATATTTTTTGCTTT 1417362 36 100.0 30 .................................... GAACAGGCGCTACAGGACTGCCCACATTTT 1417428 36 100.0 31 .................................... CGGCAAATACTCCATCAGGCCGTGTCGCAAA 1417495 36 100.0 30 .................................... ACTCCTTGACTTTGCCCCGTCACGCATCAA 1417561 36 100.0 30 .................................... CGTTGTAACCATTCAACGCCAACAACGGGT 1417627 36 100.0 30 .................................... TGCCGAGAACATGCCGCCCAAGACACCAGA 1417693 36 100.0 30 .................................... ACCGCCCGCAATCGAGATGCCTGTGCCTGC 1417759 36 100.0 30 .................................... AGACCTGATACGTGGAGGCGGCGTGCGTTT 1417825 36 100.0 30 .................................... ACTATGATATACATTCTTTTTCAATCATCG 1417891 36 100.0 30 .................................... AACGACGGCGACGTCAACAAACACTGTCAC 1417957 36 100.0 30 .................................... CGAATTTAGGACATGACATCATGGAAGGGC 1418023 36 100.0 30 .................................... TGTAAAAAGGCGTTACATTTAAGTGTTGCG 1418089 36 83.3 0 ...............C.........C...T.CCT.. | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 99.0 30 ATTGTAGCAAACACTTCATCGGTGGGGGACTGAAAC # Left flank : CGGCTTGCCCAAGCCATCACACAAACGGTGCGCAGCTACTGTCAAGTGCTTGAAATGACGCAACACGCCGTCAAACTCAAGCTCCCTAAAGATTGGTTTACATCATGACTGTGAGCCGAATGAGAAATGGATGGCGCATCGTGTGGTGTCTAGCCGTATATGATTGTCCAATGACTGAACGCGAAGAGCGTCGTGATTACACTTTGTTTAGAAAGAAACTATTGCAAGAAAATTTTTTACAGCTGCAGTATTCGCTGTATGTCAAACATTACCCGACGTATGCCCAAGCGAATGCGGTCATTGAGCGCCTGCGTTCAAACATCCCAGCAGGTGCATCGGTTGCATTCTTTTTTGTAACAGATAAACAATGGGCCATGACAGAAGAGTTTTATGGCACCAAAAAGACCAAGCAAAAGCCTGATGAATATGAACAAATTGACTTGTTTTAGTCTATTGAAAAGAAAAAATCCCCTTGATAAACAAGAGGATATTGCAGGGGT # Right flank : CAGCTTTAGTAGCATCTGATGGCGTTTGATGTAAAAGTTTTAATGAAAAAGTTAAATGAAAAAACCAGACGCGAAGTCTGGTTTTTTGTTTGGTGGCTACGTTTTACCGAAGCCTTGTTTTCAGCGGCCCCCGCCGATGAAGTGCTTGCTACAGCGGCTCAATCATAATGTTTTTTTTCTTAAAATGCAAGGTGTTTAAAAAGTTAAAGATTGCTTTATTTTTTCTGTTGAATTCGCAGTGCCATTTGGCTGGCCAGTTGCAAAGTCGCATCCCATACATCGCCTTTGCTCAGGCCTTTGGCCAAGCGGTCGAGTTCATGGGTGCGTTGCAGGGCATTTTTTAAGAAGGGCAATGTGAGTGCATTGACTGCCAGTGGCATCAGTTTTTCACGTGGCCCCCAAACGCGTTTTTCGCGCATGGCACTGGCGAGGTGAGCACCATTTTGGACTTCGATTTTTAATGCAGTCAGCGTACGGACATCTTCGGTCAGCGCCCATAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTAGCAAACACTTCATCGGTGGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //