Array 1 281586-279910 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLOZ01000012.1 Pseudomonas aeruginosa strain WH-SGI-V-07412 WH-SGI-V-07412_contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 281585 29 100.0 32 ............................. TGATGGCGCTGTTTGACCTCTCGGTGGATGTG 281524 29 100.0 32 ............................. GGACGGCTCTTCGTTGATTCCATAACGGGGGC 281463 29 100.0 32 ............................. CAGCTCATCGAGTACAGCAACGTGCTCAACAA 281402 29 100.0 32 ............................. TAGTCATAACGGTCATAGTGCTTAGACGACAC 281341 29 96.6 32 ............................A CCGACACCTACACCTCGACCAAGACCGGGGAA 281280 29 100.0 32 ............................. CGCTGCTCCTGCTCTGCCTGATCCAGGCCGCC 281219 29 96.6 32 ............................C GCAACGCCTCGTCGAGCGACGGCAGCGCGCTG 281158 29 100.0 32 ............................. ACCCGGCGAAACCCTGCATATCGGCGACAACA 281097 29 100.0 32 ............................. CCACTGGGTTACCCCGTATTGGTAGAGGGTTC 281036 29 100.0 32 ............................. GATCGCCTCGTTCTCCGACCCGACGCCTTCCA 280975 29 100.0 32 ............................. TCGACCTTGTCGACCCAGGCGACCGCCTTGAG 280914 29 100.0 32 ............................. CCCATATGTCGCAATGTTCTATACCAACAGAA 280853 29 100.0 32 ............................. TGCCGGTGGCGGTGCCATGCCGGGTGCCGACG 280792 29 100.0 32 ............................. TCCTCCACCCGCTGGGTGATTTCCTCGGTACG 280731 29 100.0 32 ............................. CGGGATAACAGTGGGAATCAGTCTGTAGGCTT 280670 29 100.0 32 ............................. TCGTAGCGCGGACTGATGTCGTTGCAGTACTT 280609 29 100.0 32 ............................. CCATGAAGGGTTCCTTCCGCGCCGTAGAGCAG 280548 29 100.0 32 ............................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 280487 29 100.0 32 ............................. CCCGCGCGGCAATAAGGTGAAACTGGGAGACG 280426 29 100.0 32 ............................. GTCTCCCACGGCGATCCGCGGTAGATCATGTT 280365 29 100.0 32 ............................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 280304 29 100.0 32 ............................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 280243 29 100.0 32 ............................. ATGTGCTTCCAGCTTTCGTCGTCCAGCTTCCG 280182 29 100.0 32 ............................. ATAAAAGAGGCCGTCAAATACCGATGCGTCCT 280121 29 100.0 32 ............................. CAGCGGGCCACCTGGCTGCAGTTGCTGACCAG 280060 29 100.0 32 ............................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 279999 29 96.6 32 ........T.................... AAGGACCGCGTCCGCGTGCTGCTGGAGACGAT 279938 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.6 32 GTGTTCCCCACATGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGTCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : TGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGTCGGGTCAACCGGAACGTCGATCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGAGAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 292311-290757 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLOZ01000012.1 Pseudomonas aeruginosa strain WH-SGI-V-07412 WH-SGI-V-07412_contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 292310 29 100.0 32 ............................. GCTCGCGGATGGCCTCCGGGGAGGTTATGGGC 292249 29 100.0 32 ............................. AATGGATGCCAGTACCTGCCGACCACCTCGAA 292188 29 100.0 32 ............................. CCGCTGTGCACATCGCCCTGGACGTACAGGGC 292127 29 100.0 32 ............................. GTCCGGGCCAACGTCGATCAGATGAAGGGCGC 292066 29 100.0 32 ............................. CAGCCGTGCATATCGCGCTGGATGTGCAGGGC 292005 29 100.0 32 ............................. CAACGCTTGGCGCGCTGCGAGGCGCTGGCGAA 291944 29 100.0 32 ............................. ACGATCCCGACCGCCAAGATTGGCCGTCGCCG 291883 29 100.0 32 ............................. GCTTGGATTCTTCTGCGTATGCGAAGCCGCAC 291822 29 100.0 32 ............................. ACGATGGCGTCCAGCAGGGTCGGCTCGATGTT 291761 29 100.0 32 ............................. AACGCGATATCGGACAGCGAACCGCCAGCGTG 291700 29 100.0 32 ............................. GCTGGAGCCGCCGGCAAGACGTTCGGCGAGGC 291639 29 100.0 32 ............................. GACGGCGACCTGAAGCGCGCGGATGCGATGAA 291578 29 100.0 32 ............................. ACGTTCTTGTGCTTCTTGCCGGTCAAATCCGC 291517 29 100.0 32 ............................. GCCGGCCAGGTGCTCGGCCAACAGCTCGCGAA 291456 29 100.0 33 ............................. ACTGGTACCGCGCGGGCAATCAGCGAACCCGCG 291394 29 100.0 32 ............................. GCTGCTCAGGCTAGCGCCGCCTCTACTCTCAT 291333 29 100.0 32 ............................. TGTTTACGAGCTTCAGCGGCCCTCCATGTAGA 291272 29 100.0 32 ............................. GAGGAGTTGGAGGCCATGATCGGCGCCAAGTC 291211 29 100.0 32 ............................. GCGATCATCGAATGGCCGCACCGCATGGACCT 291150 29 100.0 32 ............................. CTCAACGAGAAGAACATCCCGCGCAACATGAT 291089 29 100.0 32 ............................. GCCATCAAGGAAGAGCCCCAGCTGCGCGTCGA 291028 29 100.0 32 ............................. CTGCGTGTTCACGCCGAAACCCTTGGCTGGGT 290967 29 100.0 32 ............................. TAGTCCTGGCGGATATCGCTGCACCAGTGCAT 290906 29 100.0 32 ............................. ATGGAAGACCCAACCCGCGGCCAGGGGTGGGG 290845 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCA 290784 28 79.3 0 A..........A..C.....-..A....T | ========== ====== ====== ====== ============================= ================================= ================== 26 29 98.8 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACTGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGTCGGTGGATGGTCGAGGGGGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTCGTATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTAGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : GTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCACGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTGATCACCAGTGTCAGCCGCCAGTTGCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGAGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGAAGTTCCTGCTAATTTGGACAGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGTGAACAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCATG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //