Array 1 1998686-1998259 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065312.1 Blautia pseudococcoides strain YL58 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1998685 32 100.0 35 ................................ CTCTTGTGTTGCTCCAGCCGTTGCCGCTGTTGACG 1998618 32 100.0 33 ................................ AATTCCGCCGGGTTTAAGAACTCTGCTGATTTC 1998553 32 100.0 34 ................................ CAAAGCAAACAATGGCCAATATAAAAGAAGGAAA 1998487 32 100.0 34 ................................ CGCAACGCAACATCCCTGGTTTGTCTCTGTCCGT 1998421 32 100.0 34 ................................ CCACCAGAACATTATTCAAGCGCTTGGAGGCCCC 1998355 32 100.0 34 ................................ TGTCTAAATAGACGGAGCATATCATATAAGCCGT 1998289 31 81.2 0 ........-................AG..CGG | ========== ====== ====== ====== ================================ =================================== ================== 7 32 97.3 34 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : GATGAATACCCACCATTTTTTTGGAAGTAGGTGAAGTGATGTTAGTATTGATTACCTATGATGTGAATACAGAGACAGACGCCGGGAAAAGACGCCTTAGAAAAGTTGCCAAACAGTGTGTGAATTACGGAAGGCGGGTACAAAACTCTGTTTTTGAATGCATCCTTGACAATACCTAGTGTGTTTCATTGAAAGCTGTGTTGGAAGATATTATTGATAAAGAAGTTGACAGCCTGAGATTTTATTATCTGGGAAATAATTATAAAACAAAAGTTGAGCATATGGGGGTCGATAAAGGAACGGCAGCTGATTCAACTTTGATTTTCTAGTGCGAATATGAAGTGAACAGAAAAACCCTGGGGGATTCGCACCGGGTTTTAGAGATAGGATGGGTGGATATGGGGATGGTATATGGGGCTAATTGGGATTGGATGATAAAATATGATTGAAATTTGAGGAAGTTGCACAAATATGTAGTGCTAGATTTGGTGGTTTTTGGT # Right flank : TAAATAAAATAATTATTTACCTCCTACCCGATTCCTAGTTGCCTTGAAAGGGTAAATTGACCATGATATTTCATTTAATCTATATTAGTAACCTTTTCCCATTTCCATTTCCACCTTCCCGTCAAATACCACCCAAACGATATCACATAATTAGCCGCCCACCCCATAGGCACAGCCATCCACGCAACCTGAATCCCATACACCGGCGCGAACACATTAGTCACGATCACCCGAATAGACAGATTCACCAGATTAGCCACTGTAAATGCTTTCACATCTCCGGCCCCCCGCAGCAGCCCGTCCGTGGAGGCTTTCAGTCCAATCAAAGCGTAAAAGAACGAAAGGAATTTCACATAATCAAGCCCTGTCTGAAAAGCGGCACTTCCATTTCCGGCATCTAAAAATGCTGAGACAAACACATTCCCAAACAACTGATAAAGAACACATATAAACGCCCCGGCGCTCAGAACCGCCGCATAGCACATCCGATATCCCTTCTT # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 4167928-4168833 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065312.1 Blautia pseudococcoides strain YL58 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 4167928 33 100.0 35 ................................. GTCAGATATGCTGTCAGGCTTGTCTTTGTCTGCCT 4167996 33 100.0 33 ................................. CAAGAGAAGTGTACTGCGACGAGCCAAAGCGGC 4168062 33 100.0 33 ................................. TCTATCATTGCCGCCTGTATTTCTGGCGGTAAA 4168128 33 100.0 34 ................................. AGATAATGCTATACAATAGCCCAGTTGAATCTTT 4168195 33 100.0 35 ................................. TCAGGCATACCTGCACAAGTAATGTGTAAGATACC 4168263 33 100.0 35 ................................. TGGTATATCTGTCCACCATGTGTTAGATACCCATG 4168331 33 100.0 34 ................................. CGGTGAAGTGGGAAGAGTGCAGCCTGATCAGGAA 4168398 33 100.0 34 ................................. ACCTGCTTTTGTAGCATTCGCCTCTGCTTTATTT 4168465 33 100.0 34 ................................. GTTTCGTGTATAAAGCCATGTTCAAATAGCCAAC 4168532 33 100.0 33 ................................. CATACATTCGTAACCGTAGAGCGAATCCCATTC 4168598 33 97.0 34 ...........T..................... TTGCGCTATTGCAAGTACAGCTTCATGTACTAGG 4168665 33 97.0 34 ............................A.... CGTTCTGGCTGCAGGCGGAACATAGTGTAATGTC 4168732 33 87.9 36 ..T.........A..........A.....T... TCTTGTAAATAGGTAAATATCTGTACTCGGGCAAAC 4168801 33 84.8 0 ............A........A.T..A....T. | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 97.6 34 GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Left flank : TAATGGAAAACAACCATCCACCCGTGGAGGAAGCCCAAAAGGAACCTCTTCTGCAAAAACCGGAGACGAAACGCCAATTGGCATGTTTGCGGGAGTTGGAGCACTTGCACTGATTGCTATATTAGCGTGTGTGATCAGCATTTTAAAGAAGAGAAAAAGGGCATAATCGGGAACAAAAATAGAAACTACGCTATTATGTTAAAACATTCTGGCAGTTGATTACGTTCACAACTGCCGGGCAAAAGGGAGAATGCCTTTATATCTTCCACGAAAAAGTTTTGTATAACAGGAAGAATCCTCTGTATATAGATACAGGGGATTTTTCAATGTAGATATCAGGTGCGAATGCCTAGTGAACATAAAATTCAGGGGGGATTCGCACCTATATTTTGATGGAAAAAGTGGAGTATTTGTGGTAAAATAAAATAATAGATATACAAAACTTATAATATTTATGTGAAATTCACAAAAATGGCTTATGGTTTTTGTGAAATGTTGCT # Right flank : TTTTACATATTATATGATAGTGTTCCTCCAAACTGGTCACTCTTCACAAGAACAGAATAACATTCTACCAGAGCATCTGCCGAAGACAAAGACGGCAGGTGCTCTGTTATCTTTATTTGCATAAAACAGTAAAATATTGTTATTAAGATAATTTTATTAGACTATTTGCTGAAATCTGTTATAATACCTTTTAGATGTATTAAGGAGGAAAACTATGCACAACAAACAAAAAAAGAATGCATGGATACCTTCATACGCAGTATTTCCGCTGCTTTCCTGTGTGACGGTAAATTGTATTGTATATTTTGGGATTTCCAGGATCGCCGATGAATGGAAGCATTATGACCTGACGCTGCCTGTTGACAGGGCAGTGCCTCTGATTCCCGGATTCGTATCGGTTTATCTGGGGTGCTATCTTTTTTGGATTATCAATTACATATTGATCGCGAAACAGGGTGAAGAACACTGTGTCCGTTTTGCCGCGGCAGATATTATGTCAA # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //