Array 1 82446-83691 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLTL01000011.1 Paenibacillus sp. 23TSA30-6 Contig_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 82446 32 100.0 37 ................................ ACGTGGATATGACGCAGGGTATGGCGTGGGCTATGCG 82515 32 100.0 37 ................................ TCAGGCTCTTACGCAGCCAACGAAAAGACGCTTTTAG 82584 32 100.0 34 ................................ CGCAAGGCTTGACACATCCGAAGCTGCGACAGTA 82650 32 100.0 37 ................................ CGTTTGATGTGCCGTATTACTCACCTCCTTTACGTAA 82719 32 100.0 35 ................................ CCGACGAATCCCTCGGCGGAATCGACCGTGAATAC 82786 32 100.0 36 ................................ TTCGTCCACATAACCGTTAATTTTTTCGAGGACCAT 82854 32 100.0 36 ................................ CAGCAAAGGCGGGATAAGCACAAAGCGTTTTTTGAC 82922 32 100.0 35 ................................ CACGGTGCAGCTCTCCCACACGGTTATAAGCTTGG 82989 32 100.0 35 ................................ TAGCGCAGCCTGAGCCATTGTGAGGGATGCCAGCA 83056 32 100.0 33 ................................ TTACCCAACTTGACGGAGGTGGTTACTGACGAA 83121 32 100.0 36 ................................ ATGGAATACTTGGGGTCTAGGATGATGTCTGTACTG 83189 32 100.0 35 ................................ CGGTAGGCTCAAAACTACCTTCCCCGATGAACGTA 83256 32 100.0 35 ................................ TATTGCGCATTCGGCGCTGGCAGGGTGAACAGTAC 83323 32 100.0 34 ................................ TCTAATGCCACCAGCTTACGCATAACCCAAGTTA 83389 32 100.0 35 ................................ CTGATACAACGTCGATCTTGGCTAAATGGTCCCTG 83456 32 100.0 34 ................................ TTGCCAATTGCCCGCCGTAGCGGCTGCCTGTGCT 83522 32 100.0 37 ................................ AATGTATCCATCCACCGATACAAATACAATATTTTCG 83591 32 100.0 37 ................................ GGCTTACTCTTGTGAGCGTACTTGTTAGCTGGATCGG 83660 32 90.6 0 .........C..G................G.. | ========== ====== ====== ====== ================================ ===================================== ================== 19 32 99.5 36 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GTAACACGCCAAACGATCAGCGAGCATGTACATACGCAACGTATTAAAACCGCCATCTACATGCTGACCGAATCCCGACTGACGATTCGTGAAATTTCAGAGTATGTGGGGTATAGTGATGTTTCCTATTTTCATCGGATATTCAAACGACTGACAGGCTGCTCTCCATCCGAATTTCTGGATGAACGGTCTTCAATTGTCTAGCGTGTCTTGTACAGTGGAAAGAGAAGGCGGAAAAAGACTGGAAAAAGTTGCGAAACTCCGTATTTAAATGTATGTTGGATTCAACTGGATAGACAACAAATATCTCATTTTATAAAGTGCGAATGTGAAGCTCACATAAAAACCCCGGTTCCTTCGCACCTCGAAATTTGTCGAAAAAGGCTTGGATGGGTTGTAATGGGTGAATGTCAATGCTTGATTCAAGCCTTTTCGGCATCGTTTATTGCGAAAATGTATGATATTGATACCATTAGGGTATAAATCACTACATTTTCGCT # Right flank : TCAATTACCGATGCCCCAGCGCTTCGATCACAAGTCGCACTCTGTATGGAGTGCGTTTTTCACCCCCTTACTCTCCGCTTCCATCGCTCGTCCTTTCCATTTCCATATGCATTAATATTCCAAACTTTACCTTTATGCATTAGTTGCATATAATATTGACAGATGGTTAATTTTGGAGAACAATAGAATGAAAGAATATAAAATTATGGAATTTTTATGTGAAGGGTGGTTTATGTATGGAAATCACACCTACGATAAGAGCTGAATTGGAAAAATATCTAAAACAACAAGATTTAAGCATGACCGAGTTTGGGCATATTGCAGGCATTAATAGGGGGATAGTAAGTGGCATTGTAACTGGTAATAGTCCTATATCTGTTAACCAGCTTGACCGAATCACTGAGGCTATGGGTTTACCGGAAGGCTACTTCTACGACTTATATGTAGAAAACTACATCATCGAACGCTCCCCCAATATGCGTCGAATTGAGCGGTTGCTA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 109417-110393 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLTL01000017.1 Paenibacillus sp. 23TSA30-6 Contig_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 109417 32 100.0 36 ................................ TTCGTACTCCAGCTTCGGAAGGTCATCCGTTTTGGA 109485 32 100.0 33 ................................ TATTCGAGCTGACGATAATAACGCGGTCGCCCA 109550 32 100.0 38 ................................ AAACTCCTCAGCGGTAAGCCTTACGCCGACACGTTCGC 109620 32 100.0 37 ................................ CAAAGTTGGTTGCCGCTGGTTGTTTGTTCGGTCTATT 109689 32 100.0 34 ................................ TTGTTTCGTACGGGTTTAGAGCAAGCTAATCTAT 109755 32 100.0 34 ................................ GTTCCAATTAAAAACGCCTCCATTCGTAATTATC 109821 32 100.0 34 ................................ TGCATAGCAGTTACCCCATAGGGCTAAATGCGTA 109887 32 100.0 37 ................................ CATGATCCTCGTACCGTCTTTGGTGGTTGCCGAGTCG 109956 32 100.0 34 ................................ CCTGATAAAATCACATATTTGTTCAACCAAAACC 110022 32 100.0 34 ................................ AATCGAACAATCGGCATCCATATCTGGCATAAAA 110088 32 100.0 35 ................................ ATTGCCTACTTTGCAAATTGGTGCGAATAAACTGA 110155 32 100.0 37 ................................ TATCTCTACAAGCGTTACATCTTATGTACAACCAGTT 110224 32 100.0 38 ................................ AGGCTACGGGAAAGGAGTATCCAGAAGGAGCGCTAAAA 110294 32 100.0 36 ................................ CAATATAACAAAATGAAAAGCGGCATCCATTTCAAA 110362 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 15 32 100.0 36 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : ACAAGGAAAAGATGATGCAGGAGCTATTCGAAGATCCCCAATAAGGAATGGGTGACCTCAATAGCAGCCGCTTGGATGAGGAGGAAACAGTATGAGTTCAAATGTATAAAATACCTTTAGTGAACGAGGGCTACCCGTACTCGTATACAACTTAGACTTTAGCTACAAGTAGGCGTCCTATACGTTGGTCTAAGCAGATGGGATCGAAGTTTGTCTTTTGCCCAAACATTCACCGGATCTGCACCTTATTATTGGTTATCATGCTCATTTATGGTATATGTATAAGGGAAAATAAAATGAGTATACTGCTCTTTTGATGAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGATCCTTCGCACCTCGAAATTTGTCGAAAAACATTAAATCAGTTTTCTTCAGTAGAAGTCAATGGTTGATTCAAGCCTTTTTGGCATCGTTTTTTGCTAAAATGTATGGAATTGATATCATTAAGGTATGAATTACTGCATTTTCGCT # Right flank : AGTCTCTTAATGCCATCCACGGTGACCCAAGTATTAAGGCTTCTTCGCTAAAGTGAATGTTAGATGTCTGTTTAATAGAGAAAGTGTCCATACTGTCTAGTAATAAATAGGAAGAGGACGGGATGGAACATGTGGACCCCATTAAGCAAAAAGGATAATCTAATGAATGATGTGTTCAAGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 161459-162769 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLTL01000010.1 Paenibacillus sp. 23TSA30-6 Contig_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 161459 32 100.0 36 ................................ ATATACATTACTTATCACCCTCCGATTCATCAATAA 161527 32 100.0 35 ................................ TGCCGTAGCGCCTTGTCAACGTCTTCAATCGGGAT 161594 32 100.0 32 ................................ ATGATTGGGACGGTCATCATGGTCAACATGGG 161658 32 100.0 34 ................................ AGTCCCACAAATAGACTGTCTTTGCATAATTTTT 161724 32 100.0 35 ................................ ATTTTTATGATCAAAAAATTTTCCAACAAGTATCA 161791 32 100.0 38 ................................ TGGACTGGCTCCTGGGATAGAAGGAGAGATTCCCCCGC 161861 32 100.0 35 ................................ GATTATGAGGATATGACTTTGGTAAATGTCAAAGG 161928 32 100.0 33 ................................ ACAGCAGCAAACGAGTATGGAAACACATACTAC 161993 32 100.0 34 ................................ CAGCAGGCCGTAATTCTACATTTATTGGGGAAGC 162059 32 100.0 36 ................................ TGATTTTTCGTGAGGATAATACCTGTGAGCTCATAG 162127 32 100.0 35 ................................ AGGCTGATTGATAAGTTGACCCTTGGTGATCGAAT 162194 32 100.0 40 ................................ TAAGGAGCTTTGTATGTATTACAGTAAAAAGAAGTCTGAA 162266 32 100.0 34 ................................ ATAGGTCGATTCGGTAGCGGACAATTCAATGACC 162332 32 100.0 36 ................................ CAGTACGCTGTTTCCTTATGAACCTATCTTAGCATT 162400 32 100.0 36 ................................ CGGCCTATGTAGCGTTAGGCGATATCGCCGAATGTA 162468 32 100.0 37 ................................ CTCTTCGAGCTTCTTAATTAACTCTCCAGCTTCATGA 162537 32 96.9 36 ..........................C..... CCCCTGATTGATTATTAAGAGCCGATTCCGTGATTA 162605 32 100.0 36 ................................ ACTTTAGGTTCGTATCCTGTTGTTTTCTGAGATGTG 162673 32 100.0 35 ................................ ACGCAGAAAGTAACTTTGCAGATTCATTAGCAAAA 162740 30 87.5 0 ....................--........GC | ========== ====== ====== ====== ================================ ======================================== ================== 20 32 99.2 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTTTCATCTTGTGCTAAGGGAAGCATTCCATCATTCACATAGGTAATTAAATCTTTTTTTACCGGATCGGTAGAGCAGGCTGCCAAAATGGAAAAGCAACATAATACCAACATAAATACGCTAAGTTTTTTCATCTGTATTCCCCTTTTTATGTATGTTATGGGTAATTCGATGTGCCTTGTAGTCAAAAAGAACTATCCATATCATTTTATTATATCGTATAAATAAGAGAATGGTAGGGTTTTTATGGTAAAATAGTGTCGAAACTAAGTTGATTGATCTGTTCATTAAAAATAGGTAACCATATAGAAGCCGATTCGGTGCGAACCCCAAGCGCACATGAAAATCCCGGGTCCTTCGCACCTCGAAACTTGTCGAAAAGTATTGGATTGGCTATCTATCCGTAAAAGTCAATAGTTGATCCAAGCTTATTGGGCATCAGTTTTTACGGTAATGTGTGGAATTGATATCGTTAGGGTATGAATTACTGCATTTTCGCT # Right flank : CAAAGCTCTCAAAATAACTTTTTACGTGTTTTGCGTGCGCTCAAGTTTTTTAGCATTGAAACCCAAAGAAGGCTACCTTTTAATTAGGGGAGCCTTTTTCGTCGTGGTTTTTAGGAAAGAAGAGTAGAGAGAGAAAAGTGTAGGAGGCGAGTACACATAGTTCCAAAAGCGGTGACTTAATTATCACGGATTACAAATAAGAATATTTTAAGAAGTATCTTCCATTAGAACCAAAATTGTTTTATGATAGTGATAGACAGCTTAGAAGTTTTCCAGATGTATCTGGAAATAGTGGAAATTTCTTAAAACATTCGAGAGGGGATTTCAGTATGAATAGGTTCAAAAAGGCAACTTCGGTTATGCTAAGCACAGTGCTCCTGCTTTCTTTCGGGATGACTGCGAACGCGAGTCAAACCACAGAGGGTAAAACGGAACAAGCGATTAAAGCGGAGTCCAATGTTCAGCTAACAACTGAAAATGAAAGCGTCATTAAACATTTA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 102107-101062 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLTL01000021.1 Paenibacillus sp. 23TSA30-6 Contig_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 102106 32 100.0 35 ................................ ATATCATAGTACCTCCTCGATAAACTCGCATTCCT 102039 32 100.0 33 ................................ TCCGTTGTGTATTGTCTATGGTTTGATTTTCAT 101974 32 100.0 35 ................................ TCCCCTGCCCCATCGACACGCCCATTCAAATTCCT 101907 32 100.0 38 ................................ ATAGAGCAGTCCAAGGTAAGGCGGTTAGGAAGTGGCAT 101837 32 100.0 39 ................................ ATGGAATACTTGGGGTCTAGGATGATGTCTGTACTGGAC 101766 32 100.0 39 ................................ AATCTTGGACCGAAGTATCTTTATCTGTTGGAAACTCAG 101695 32 100.0 34 ................................ ACTATAAATTCAACCTTCGTACCGTCTGGATAGT 101629 32 100.0 35 ................................ CATGAGAAGCGTTCGTTTCAGGCAGTTGAGATACA 101562 32 100.0 35 ................................ AATCATGTTATTTATCCCCTTTCGTTTTCAACGTT 101495 32 100.0 35 ................................ ATTTGCAACTCTTCAACCGACTGGAATTTCAATGG 101428 32 100.0 36 ................................ ATAATGAAATAATAGCCAGAATAAATATGCTGTTAG 101360 32 100.0 35 ................................ TCCCTGGTTCGGGTTGAGGAGCCGCCATGTTTCAC 101293 32 100.0 35 ................................ CTGCTGAAACTGTTAAAATTATTGGCAAAGTAGTT 101226 32 100.0 37 ................................ ATCCTCATTAACAGTCGTGAAATGGTTGAAAGTGTCA 101157 32 100.0 32 ................................ GGTGCGTATCGTGTGCGGCTTAAAAACGTTAC 101093 32 93.8 0 ......................A........A | ========== ====== ====== ====== ================================ ======================================= ================== 16 32 99.6 36 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTTAAGAATCTACTGAAACAAGCTTGACTATGAACCTATTTCTATACGGCGTTACCCATCCAATAGAGCGAAGAGCCGTATTA # Right flank : AAGATCTTTGGCCATAGATTATCAAGTCTATAATATGGGAGGGCTTTGACGTATTCTACGTTAGCAGCTCTCTCATTTTCTTTCAGCACATACAGAATATCAAGATCTATTTATCATAGTATTCAACGTGTGCATTGATAGGAGGAAACACATGACCAAGATGATGAAATTTGCTTATAGTGTATACCTTGACGGGTATACTCCTTATAGAATATATTCAAAGCGAAAGGAGGCACATTATATGGGCGTGAGCATGAAAACTTTGAGTGCACTTGCCGAACCCAACCGATTATTACACATTGTCGAGCTTTTACGTGACAGGCCCCTTACTGTAGGAGAAATAGCTGATCGACTTGGTGTTCGTCAGCCGCAAGTGTCTAAACATCTACGTATACTTAGTGATTCCGGGCTCGTTGAGGTACATCCAAGTGCGAATCGCCGCATCTATAAGCTGCTGTCACAGCCTTTCTTGGATATCTGGACGACTGGATTGGTTCCTT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 78236-77791 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLTL01000002.1 Paenibacillus sp. 23TSA30-6 Contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 78235 33 100.0 36 ................................. CAACACGCCAGAAGTTAAATCGCCGCCACTCGACAA 78166 33 100.0 34 ................................. ATTAAGGCAATGGACGAGTATGAAAAAGCCCTTG 78099 33 100.0 37 ................................. GGTGGTCTCCTGGTTCTGAGTCAGCAGCAAGCCTACA 78029 33 100.0 35 ................................. ATGTGGTCAGCCCCTTTACGATTGATTGCATTTGA 77961 33 100.0 37 ................................. GGAATCTGACAGACGCCAGTGAGGGCCAAGCCTTGCA 77891 33 100.0 35 ................................. TTGTTGTCCGCTTTTTGCGTGATGGTCGGACGCTG 77823 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 7 33 100.0 36 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CTCCATTTTTGTGGAAGTAGGTGTGATCTTGTTAATCCTAATTACTTATGATGTAAGTACAGTAGACAGAGAAGGCAGAAAAAGACTGGCCAAGGTTGCGAAAAAGTGTGTAGATCACGGACAAAGGGTGCAAAATTCCGTGTTTGAGTGTATTTTGGATTCGACCCAGTTTCGCCGTTTGAAGTATGAATTAGAAGAATTGATAGACAAAAAAGAAGACAGCCTGCGTTTCTACAATTTAGGAGATAACTATAAAAAGAAAGTAGAGCATATGGGTGCAAAAGAAGCTTACGATATGGAAAGCCCGCTGATTCTGTAAGGTGCGAATGTAAAGCTCACATAAAAACCCCGGATCCTTCGCACCTCGAAATTTGTCGAAAAGGATTAGAATCCACTTTCTATAATAGAAGTCAAGGGTGGATTCAAACTTTTTTAGCATCGTTTTTTGCGAAAATGTATGGAATTGATATCATTAGGGTATCAATTTCTGTATTTTCGCT # Right flank : CAAAATATGGTATTATCATTGCTTTAAGAATTTAGTGTCGCACTCTATATGGAGTGCGACCTTTCCATCACACACGGCGTCCATTTTAAACAAACTAGAAAACAACGCAAATCCTTTTATCTACTCAAAATATATTTTACAAATATCTTTATGATTCTTAAAAACATAAAGGTATCTACTGATCAATGTAGAATATATATCGCTGTACTCCAATTCCAGAGAGGGGCAGATGAGGATGAAAAGGCGGGTTGCAGCAAATGGAATCAAGAGAGGTTTTTTAATAACGTTAGCATTATTACTAATGATTGCAGGGTCTTCATTGGGAATGAGTGACGCTTCCGCTGCACTATCTGAGCAGAAGGATAAGCAGGATGCGCCCGTTTTTTCCGAGGTATCCGTTCATGATCCTTCCATCGTCAAAGACGGCGATACTTATTATGTGTTTGGTTCACATATTTCGGCGGCGAAGAGCAAGGATCTTAAAAACTGGACTTCTTTTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 2 89337-88156 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLTL01000002.1 Paenibacillus sp. 23TSA30-6 Contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 89336 32 100.0 35 ................................ CATCGTGCCAGTAGGCAATAATTTCGCCCCATTCC 89269 32 100.0 36 ................................ ACCGTTACGGTATTGTCTACCAGCCCACAGGTTGCC 89201 32 100.0 35 ................................ TGTGTCCACATAGTCGCGTGCGCTGCCATAGCCCG 89134 32 100.0 36 ................................ CTATTTTCGATAACGTTCTTGGTGCGCTCGGCCTCG 89066 32 100.0 33 ................................ CGCCAAGCAACACTTGCACTTGACCAAGATGCG 89001 32 100.0 34 ................................ TTATGTGTGTATTCGGCGTCCGTTCGATGCGTCC 88935 32 100.0 38 ................................ TTTCGGGGACTCATATCGTTGTAGTTGACCATAAGCGC 88865 32 100.0 33 ................................ GTTTTCCAAATACTTAATGCGGGATCGGATTTT 88800 32 100.0 35 ................................ CAAAGCGTCCGTATACTTTTGATTATAGTATTGTC 88733 32 100.0 37 ................................ CCCATCGTCTTCCCGGAATCCCCATCATTGTCGTCCC 88664 32 100.0 37 ................................ GACTTTTGCCATGTAAGCAAAACAGTCGACATGTCTT 88595 32 100.0 36 ................................ CTATGACGGATTACTTGAAATTATGGAGCAGGATGC 88527 32 100.0 36 ................................ CTTGACCAGCGTTTCATAGTCCAGCTTGCCAGGGCT 88459 32 96.9 37 .......C........................ CTTACCGTTTACCGTAGCTTTGATTATCATGATCGTT 88390 32 96.9 36 ........T....................... ATCCATTGTGTCTTGGATCAGACCGATATAGAGCAT 88322 32 96.9 36 ................A............... AATTTCCCCGCCGATATGATCGGACAATACCATTTC 88254 32 96.9 35 ..........A..................... TGTGATACCGGCTTAGGAGCACCGTCTGGTTTTAG 88187 32 96.9 0 ..........A..................... | ========== ====== ====== ====== ================================ ====================================== ================== 18 32 99.1 36 GTCGCACTCTGTATGAGTGCGTGGATTGAAAT # Left flank : AAGTTCCGTATTCGTGTCAATGTCATCTATCCTGGAGCGATTTCGACGAATATTGACGAAACTACGGAGAAATCGGAAAGGTTAAAGCAGATTACTATCCCTGTCCAGTTTCCCGAAGGAGGGCAGCCGTTGGCTGATGGACCCGGTCAACCCGAGCAGGTAGCTGATTTGGTAACGTTCCTGGCTTCCGATCATTCGCGTCATATTACCGGTGCCCAAATTGTGATTGATGGGGCAGAGTCCTTATTGTTTTAGCACTAAAGAATTCTCTGTGAGGGAAAAATGTTTTGTGGTATCCTGAGTGTAACGTCTTGGTTAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGATCCTTCGCACCTCGAAATTTGTCGAAAAGGATTAGAATCCACTTTCTTCGGTAGAAGTCAATGGTTGATTCAAGCTTTTTTAGCATCGTTTTTTTCGAAAATGTATGGAATTGATATCATTAGGGTATCAATTTCTGTATTTTCGCG # Right flank : ATATGAATGTTGGATCGGCTACACTTAATTGGACAGAAAAATTAAGGGCTAGTAGAATGGAAATTTCATAATCAGGAGCGGGTCTACTATGCCCAAACAACGACGTACTTTTACAGCGGATTTCAAGAGACAAATGGTTCGGCTATACGAGAATGGAAAATCGAGGGCAGATATTGTGGATGAATACGAATTCAGTGCATCTGCACTGGACCGCTGGATTAAACAGGCTCAAACGACAGGTTCGTTCTCAGAGAAGGACAATCGTACTGCCGAAGAGAATGAGCTTATTGCCTTACGCCAAGAAAATCAACGTCTTAGAATGGAAGTCGACATTTTAAAGCACATGGGACGAAAGTAAAGGCCATTCAGCAAAATTGTGACAAATACTTGGTATCAGCGCGGATCGAGGAAGTGAGCTTAAGAATAAATGGATCGACGAAACCCTTGAAACCTTTCAAATTAGCCGATCGCTTATGCATGAGAGGCTGTCCTTATGATAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //