Array 1 66422-64625 **** Predicted by CRISPRDetect 2.4 *** >NZ_HG313760.1 Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 = CIP 76.13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 66421 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 66360 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 66299 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 66238 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 66177 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTCGGCAGAG 66116 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 66055 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 65994 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 65933 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 65872 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 65811 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 65750 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 65689 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 65628 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 65567 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 65506 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 65444 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 65383 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65322 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65261 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 65200 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 65139 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 65078 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 65017 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 64956 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 64895 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 64834 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 64773 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 64712 27 100.0 34 ........................... TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 64651 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 30 27 99.0 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //