Array 1 191872-195023 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSTG010000001.1 Acinetobacter baumannii strain A40 P_contig000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 191872 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 191932 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 191992 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 192052 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 192112 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 192172 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 192232 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 192292 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 192352 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 192412 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 192472 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 192532 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 192592 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 192652 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 192712 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 192772 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 192832 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 192892 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 192952 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 193012 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 193072 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 193132 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 193192 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 193252 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 193312 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 193372 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 193432 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 193492 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 193552 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 193612 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 193672 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 193732 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 193792 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 193852 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 193912 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 193972 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 194033 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 194093 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 194153 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 194213 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 194273 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 194333 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 194393 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 194453 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 194514 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 194574 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 194634 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 194694 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 194754 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 194814 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 194874 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 194934 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 194994 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //