Array 1 3820856-3825206 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJUV010000001.1 Teredinibacter franksiae strain Bsc2 2531935474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3820856 28 100.0 32 ............................ TCTTTAATCAAGATATGACGAACAGTCGCAAG 3820916 28 100.0 32 ............................ GAAGGGGCTGTTTGTTTTATCGAAACCATCCA 3820976 28 100.0 32 ............................ TTTGTCAGCCGCGCGAAATAAGCTCTTCAATA 3821036 28 100.0 32 ............................ ATTGCTGTTTGAGAATGGCACATTGAATAGGA 3821096 28 100.0 32 ............................ TATATACAGTCCCATCAACAGCCGTATCTGAC 3821156 28 100.0 32 ............................ GTTACCGTTCCAACCGAGCTATTAATGATAAC 3821216 28 100.0 32 ............................ ATCGGTTGACCCCGGGGTAACCGTCATACCAT 3821276 28 100.0 32 ............................ AATATGGCAAGCAAAGCCAAAAAATCAAGCTC 3821336 28 100.0 32 ............................ TCGAAGTAATCCATTGCCCGATAAATCAACGC 3821396 28 100.0 32 ............................ TCTTATAATTACCGAGACTCTTTGCTTGGATA 3821456 28 100.0 32 ............................ TCTTGTTCCGGCTGGTAGGCGCTCAGGCAAAA 3821516 28 100.0 32 ............................ TGCTACAAGCCCATAACCGCGTGGTATAGCAA 3821576 28 100.0 32 ............................ AGTAGGTAAGCCAAAGTAATCGCCAAGGCTGC 3821636 28 100.0 32 ............................ AAAAGAAATTAAGCGCTACTATACAGACCGAT 3821696 28 100.0 32 ............................ ACCACATGTACGGCTCGGCCTTTAAGCATAAC 3821756 28 100.0 32 ............................ GCTCGAAATTGACTGGTAATAGCTGCCATCAC 3821816 28 100.0 32 ............................ TTAGCTATTCGGGTATGAGTGAGTGCGCAGCA 3821876 28 100.0 32 ............................ GGGTCTAAAATATACGACTTTAGGTCTTGCAT 3821936 28 100.0 32 ............................ AGTCCCCCGCCGCGTGGTAGCGAGTATTAACA 3821996 28 100.0 32 ............................ AAATAATCGTTTTCTATCAAATTAATAATGTA 3822056 28 100.0 32 ............................ TTCCACGTTGCGGAGGGGACGTTCTCCGTAAA 3822116 28 100.0 32 ............................ TACATATAACGCTAACGGACAAAAGACGATAT 3822176 28 100.0 32 ............................ AGAATCAACGCAACACAGAATATCAACGCAAC 3822236 28 100.0 32 ............................ AGAACTCAGCAGACCAGGAGGAGTCAGCGTTT 3822296 28 100.0 32 ............................ ATCAGCTCCAATAGATACTGTCGCGCCCACTG 3822356 28 100.0 32 ............................ TATCCACATCTCCTCTCCCTTAGCTACTTCTG 3822416 28 100.0 32 ............................ TCAGTAGGGTAAAAACCCTCAAGATAAACCTC 3822476 28 100.0 32 ............................ GCAATGCCAGCATTCAACAATCCAGCCCTCCT 3822536 28 100.0 32 ............................ AATTGCCCTGAGTTTGTCAAAGGGTACGAAGC 3822596 28 100.0 32 ............................ TTGTCTTGGCATGATTTAAGCATAGATGCAGC 3822656 28 100.0 32 ............................ GCTATACAAGCCCATTTTTATTGGCTGTGGCT 3822716 28 100.0 32 ............................ GCAGAAAGACGCGCGGCCGTAGTTGTGAGTGA 3822776 28 100.0 32 ............................ TCTTTTCGGGACGTTCTTATAATCTCCCACGC 3822836 28 100.0 32 ............................ ATATAACTAGCTCCTGTTGAATATGTGCTTAG 3822896 28 100.0 32 ............................ AACCAGCGATAACGGAGGGGGCTACGGCCCCA 3822956 28 100.0 32 ............................ TTTTGTTGGCTGGACTTGTGGATTTTCACTTG 3823016 28 100.0 32 ............................ AGATACAGTAAGTATGCGCGGTTCAGCGAATC 3823076 28 100.0 32 ............................ ACACTTTCACGGAGTTGGTAACATGAAAACAT 3823136 28 100.0 32 ............................ TATGGATTAAATTAACTAAAGAAAGGTGATGG 3823196 28 100.0 32 ............................ TTATTTAACCAGCCGTACAGCCGGCTGAAATA 3823256 28 100.0 32 ............................ TCGTTGGCCTTCGCCTTGATAGCATTCATCAG 3823316 28 100.0 32 ............................ TTGAGTTGTACGACAGGGCCCGATACGTGGCG 3823376 28 100.0 32 ............................ ACTACGTGGCAGCGCGGGGGGCGTTTATATGC 3823436 28 100.0 32 ............................ ATATGCCGCCATTGCCGCTTGCCTTGGAAGTT 3823496 28 100.0 32 ............................ TTTCCCGTCTTTTAGATCGTATGCGAGGCTCA 3823556 28 100.0 32 ............................ GATAAAAGTTACTGTTGCCCCGGTTGCATTAC 3823616 28 100.0 32 ............................ TTTTCAATCTGGCCGCCAAACGAAGTTTTTGC 3823676 28 100.0 32 ............................ AAAAGCCGTAAGTGGTGAAAGTATTTTTGCCC 3823736 28 100.0 32 ............................ TGCGAGCGTTGTTACTGCCCATCCCGATTTGA 3823796 28 100.0 32 ............................ AGTGGTTCGAATACCTCGTTAGGAAATAGCGC 3823856 28 96.4 32 ........................T... TTCCTCATACTGAAGCATATCAAAAGCTTGAT 3823916 28 100.0 32 ............................ CATCATGGATAACATGTATCTCGATACATTTT 3823976 28 100.0 32 ............................ ACGCACTTGGCGCTAATTCGCGCGCCAGTCCG 3824036 28 100.0 32 ............................ AGCCCGGTTAGATCGTCCTGAATAACCATTTC 3824096 28 100.0 32 ............................ TAGTTACAGATCGTCTAGTCAGATCGATATTG 3824156 28 100.0 32 ............................ GTTATGCCTGTGGCCTGTACGGTCTTAACGTT 3824216 28 100.0 32 ............................ GTACCCGGAATGATCGACCACTTTTAAAAAAA 3824276 28 100.0 32 ............................ GCAGGAAAATGGGACGAAACTATGGAAAAAAT 3824336 28 100.0 32 ............................ TAGGTGACGGTGATGGCGGTAATGCAACAGCA 3824396 28 100.0 32 ............................ TTGAACCCCATCGTGCCGAGTGTGATACCAAA 3824456 28 100.0 32 ............................ GCAACGGGCGCAGCATCCACGATTGTAGACGG 3824516 28 100.0 32 ............................ TAACGCGAGTATTGAATTCGTATCGATTGATG 3824576 28 100.0 32 ............................ TGTTAATGTCATCATTGTCCTTCTCCAAAAAA 3824636 28 100.0 32 ............................ GTACCCGCACGCGAAAATCAATCTTTCGGAGT 3824696 28 100.0 32 ............................ TCAACCAGTGCATACTCGCCTAGCTGGATGTC 3824756 28 100.0 32 ............................ GAAAACTGCATTTTAGTGCGTATAAATGAAGA 3824816 28 100.0 32 ............................ CCAGGACGGGACGCCACTGACCCGGAGCGGGT 3824876 28 100.0 32 ............................ GCAGGTAGAAGCGTGGTCGGGGACACGTTTAT 3824936 28 100.0 32 ............................ ATTGACGCGGCTACACTCGACCGTTTTTGTAT 3824996 28 100.0 32 ............................ ATATCCACACGCGAAAATCAATCTTTCGGAGT 3825056 28 100.0 32 ............................ CCTAAAATCGCGCAATAATCGCCGTTTGGCAA 3825116 28 100.0 32 ............................ ATCACCAAAATCAACGCCCTGACCCACTAACA 3825176 28 85.7 0 .........T.........C...TC... | CA,C [3825197,3825200] ========== ====== ====== ====== ============================ ================================ ================== 73 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTTTTCCTATTCAATTTTTTATAGTTGTTCATCTAGCTTGCTCTGGTGCAAATTCAGAAATGGGCGTTACCCTCCTCAGGGGATTTCTGCTCAATGCTACGTTTAAATACCTCCATAGCTATATCAAGCTTGCCGCGACCGATAACTATCTTGTATGTATTTCGCAGGAAGAAAGGCTTGATAAGCCGAGCTACAGGGCAAAAGTAGAGCCTGGTTGCACTATAACGATACTGAAACGGGAGATCTCTGTTCATTTGCCATGGGAGCAGAGGTAGCTTCCGTTTATTTGACCGATGCGATAAGACTATAGAGCCCGTTGGGGCTCAAATAGCGGTAAGTCGCGTGCGAGTCAAATTTTTAGGTATAACACCAATAAAAAGTGCTCTTTAAAAAAGCGTTTATAAATCAATAAGTTACACGAACACGGAAAAGTATAGGTAAAACGGCGTTTTTTACCGTAAGTGTTTGTTGTAACTTACTTTTTTGGATTAAACTTGTA # Right flank : AAAAGTGCACCACCTATGCTCAAACTACTTGATTTGTGGCTTCTAGGGATATCGATTGCTTCCCTGAGCGGGGCATAGCTCGTTCCTTGAGGTTTTTCATGCTGTGATAATACACAGTAGTATTTGCTGGGTTTAAGTGTTTTTGGTGTTGTTAGGGCCACAGTGTTACCTGTGGCTTGGGAGAGAATCACATAATGCCTAAACAGGCTTAATCGCCTCTATAGTGGCCGAAAGCACACAATCCGCCAAACGGCTACCCTCCATCCAGTCACTAATGTACTCCTTACTTTCATCCTTGGGTTTTATGACAACATCCAAAAACCCGGCCTCTTTAAGCATTAGCTCAATCGCTTTAACGGTGGATGCGCCGGTTGTACAGTCGGCATAAAGAGCCATATCATCTTTCAGATACTGAGGTATTTCTGCGCTAGTAACGATGTCCGATATCGCCAGGCGGCCACCAGGCTTGAGTACGCGGTAGGCTTCGTCAAACACCTTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //