Array 1 40862-42518 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABKBB010000041.1 Vibrio parahaemolyticus strain CGVP3 P3_DENOVO_Contig_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 40862 28 100.0 32 ............................ GTCATCAAAATTTATCGATAAATTAAAAGAGT 40922 28 100.0 32 ............................ TTAGCCTTAGCTTTAGCCTCTTGCTTGGCCTT 40982 28 100.0 33 ............................ GATGAGGAAATGGCTGAGTTAGCTCGAAACCTT 41043 28 100.0 32 ............................ GTCACAAGGGTGATTTCCACTCCTTGCTGATC 41103 28 100.0 33 ............................ ATCCGTCTAACGCTTCATCAAATGGGTGGTATT 41164 28 100.0 32 ............................ TTTTTTATTGGATTGAAGTTATGACATACCCA 41224 28 100.0 32 ............................ TCGTTGCGTGTGCCTGGTGTTTATAAGGTGCA 41284 28 100.0 32 ............................ GTCAAAACGCGATTGTGATGCAAAACCTCGAC 41344 28 100.0 33 ............................ TATGACAGCTCAATGAGTCTAGCTAAGAAGTTT 41405 28 100.0 32 ............................ CGTCAAGGCTGGTACTCAAACAGAAGCGAAAG 41465 28 100.0 33 ............................ ATACCGCAATATTCACATAAACGAAAGAAATCT 41526 28 100.0 32 ............................ TGGCAGCCTGATAAGAATTGGGCTTCTGGTGT 41586 28 100.0 33 ............................ CAAAGAAAACCGAACTAAAGCTAGCTGCTTCGC 41647 28 100.0 32 ............................ TCGGCGTTGACGCCTGCATTGCAGAAGTTGTT 41707 28 100.0 32 ............................ AACTAGCGCGCTACGCTTACTCAAATCAAAAA 41767 28 100.0 33 ............................ TGAGTTTCTGTTAATGAGCAAGAAACCTCCCTT 41828 28 100.0 33 ............................ AATAGATCGTCGCCGCTGAATTGTGCTAGGTCT 41889 28 100.0 32 ............................ AATAAACCCTGCCAGTGAGTCTGAGAGAGGCT 41949 28 100.0 32 ............................ TTTGCCTTGTGGCAAGTGCATTGGTTGTAAAA 42009 28 100.0 32 ............................ TTTGCGCTTCTTCTATGTACCAACTAGGTTTT 42069 28 100.0 32 ............................ TTAGACAGATTGTAAACCTTGTAGAAGTCATC 42129 28 100.0 32 ............................ TGCTGCCAACAGACTGGCTCGTCGTAACCTTG 42189 28 100.0 32 ............................ TACGTAATATATATTGAAAAATGCGGTAAAGC 42249 28 100.0 32 ............................ ATTAACTCACAGCTGCAACACCAATATTTTGA 42309 28 100.0 34 ............................ ATCATCGATTAGCGTTGAGCGCTATGTTGATTCA 42371 28 100.0 32 ............................ TGTCACAGCCACGAGCGCGTCCCTGGTTAACT 42431 28 96.4 32 .............C.............. TGCCCGTTGTTGTAGCGTTGACCATGCATCTA 42491 28 89.3 0 ..........A..C............G. | ========== ====== ====== ====== ============================ ================================== ================== 28 28 99.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTCAAATCCCCTGAGCGAATTGAACGCGATATGCAGAAAAAAGCGGAGCTTTGGGCGGCTAAATCTGGCAGGTCATTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTCCATTACCGTTTATCTATTTACATAGTCAACAAACCAAACAACGTTCACCGGATAAGAGCAGCAAATTTCCGTTGTTTATTGAAATGAAAGCTATCGGAGTAAAACAAGAAGGTTATTTCGACTGCTATGGGCTGAATTCCAAACTTAATCGGCAAGATTGCTTAGGGACTGTTCCGCAATTTTAATCAATAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGGTATAAAATACAGCTAGTTACAATAGATAGATTTTGACAAGGTAAAAACATGATTTTTATCCTATCTATCTGTTGTAACTTTCTTTTATTGATTTATTCTGTT # Right flank : AGGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAGATTTTATTCTCATAATATTTAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCTTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTACGAAAACCCATGATTATTCATATTTAATTTGCCAAAATTTAACAAAAAACAAAAGTCAAAAGATATGATTGCTTGGAAATAATCGGTGAATAATGCATAAATTAATATTATGTGTATTATTATTGAAATTAATGATTGAAGTGTATCGTCTCGCGATAAGGAATAAAATAGTGTTGTGTAATGTTTGTAAATTGAATTATGACAAAACTATAAGGCTAGGTAGGATAGCCATTTGTGATGAATGTTTGATTTCTGCAAGTGATTTTTATAAAGAGCATAGTCATGAAAAGTTTGAAATTATATTTCATGCAGATAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //