Array 1 1159410-1161836 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029206.1 Actinobacillus porcitonsillarum strain 9953L55 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1159410 32 100.0 34 ................................ TCTAATATGAGAAAATCAAGTTTTTTTTTTTAAA 1159476 32 100.0 33 ................................ GATTTTTTGGATTTGTCAATTAAGGTATGACTG 1159541 32 100.0 36 ................................ AGCGTTATAAAGTAACCGTCAATCAAAAAATTTTAA 1159609 32 100.0 33 ................................ AGTGGTTGGTAGTTTAGCTGTTAAACCAAAAAC 1159674 32 100.0 35 ................................ ATAAAAAGTATTTAAATTTATGATTGCCAATCCTT 1159741 32 100.0 36 ................................ AAATTTTTTTATCGCAATGCCACTATATATAAAGCG 1159809 32 100.0 34 ................................ CCATATGTGGGGAAATCGGGAAAAAAAAATTTAT 1159875 32 100.0 35 ................................ ATTATTTGATGGCTAGAAATTGTAAAATATAACTT 1159942 32 100.0 36 ................................ ATGTTCTTTGAAAAATTTTTTTTATCGGCAATGCCA 1160010 32 100.0 35 ................................ TGTCAATCCAGATCTTACAAATTCCACATAATCAA 1160077 32 100.0 35 ................................ AAACCAAAAAAGATCAAGGCTTTTGTAACAAATAA 1160144 32 100.0 35 ................................ GAAATTGTAAAATATAACTTGATTTGGTATATGTA 1160211 32 100.0 35 ................................ CCATATATGGAAAAATCAAGTTTTATTTTATAAAA 1160278 32 100.0 34 ................................ CCTCTTGTTTTACGATTGCTTACGCCTTGCCTAT 1160344 32 100.0 34 ................................ TATATATAGTAAGCATTGCCAATAAAAAATTTTT 1160410 32 100.0 34 ................................ GATTGACAAAATAATGCTAGAATTTATCGTTTGA 1160476 32 100.0 34 ................................ ATTCTAAAAGCCTTGATCTTTTTTGGTTTAAAAG 1160542 32 100.0 34 ................................ ATCAGATCCCGTTTATCGCTGTTTAGCCTTTCAG 1160608 32 100.0 34 ................................ TCAAATATGGCCTTAGGTATTATTTTTTATTAGT 1160674 32 100.0 34 ................................ ATTACAAATGTCTTGATCGTTTTTGGTTTAAAAG 1160740 32 100.0 36 ................................ AAACCAAATTTTGCAATTTTTAGACCGCTGAAAATT 1160808 32 100.0 34 ................................ GAAGAATTGGCAAATGATAAATTAAATAAAAGTT 1160874 32 100.0 34 ................................ GATTGACAAAATAGGGTTAGAATTTATTACTTGA 1160940 32 100.0 33 ................................ GTATTATAAAGTAGTTATTTTGTTTTGTCAATC 1161005 32 100.0 35 ................................ GGATTTTGTCAATTAAGAATTTACAGCTTTTGACG 1161072 32 100.0 35 ................................ AGGTATTATTTTTTATTAGTATAATAAATAAACAA 1161139 32 100.0 33 ................................ AGATTTTATCAAGTGATATTTTCTAGTTTTTGG 1161204 32 100.0 35 ................................ ATATATGGGAAAATCGGGAAAAAAAAATTTATCGA 1161271 32 100.0 35 ................................ AGATTTTATCAAGTGATATTTTATAGTTTTTGGTA 1161338 32 100.0 36 ................................ GGCTTGGTAATGCCGCCTCATACGCATTCAGCACAT 1161406 32 100.0 35 ................................ GTGGAATTGGCAAATGATAAATTAAATACTTTTTA 1161473 32 100.0 35 ................................ AAGGTGGCGATGCCGATGATATGCGTAAATATGCG 1161540 32 100.0 33 ................................ TTATCTTCTAGGTAGCCTAATGCCGTAGTTGTT 1161605 32 96.9 35 ............A................... ATTGAGATATCATAAACATCTGCCATTGCTCTAGC 1161672 32 96.9 35 .....................T.......... CCAAGTAAAAGTATTATGGACTGAAGCCAATGGGG 1161739 32 93.8 34 .G.................T............ ATATCCAGCTTGCGCGCCATATCTAGCCCTAAAA 1161805 32 96.9 0 .....................T.......... | ========== ====== ====== ====== ================================ ==================================== ================== 37 32 99.6 35 GTCGCTCCCTTCGCGGGAGCGCGAGTTGAAAC # Left flank : ACCCAGCTGTAAAGTCTTTAAGGAGAGAATATGCTAATGCTGATTACCTACGATATTTCGTTCGACGATCCTGCCGGGCAAGCAAGGTTGCGCCGTATTGCAAAGCATTGCCTTGATTATGGTGTCCGTGCGCAATATTCAGTATTTGAGTGTGATGTGACACCAGATCAATGGGTAAAGCTGAAACAAAAATTATTGGAGACCTATAATCCCGAGTGCGACAGTTTACGTTTTTATCACTTAGGCAGTAAGTGGCGTAATAAAGTCGAGCATCACGGCGCAAAACCTGCTGTTGATGTGTTCAAGGATGTGCTGATTATCTAGCGCTAACCCATGGTTCTCATCAAAATGCCGGCAGATTAGCGAATGGCTAATCTATTGCGTTCTTTAACAATTGAAATAATTGATTAAACTTCTTAAAATAAATGCGTTTTTAAAGTGGTAGGTTAGCGATTTAGCTTATGTACCGCCTTGAAAATACTGCTGTTTTTATAACGGCA # Right flank : CGCCCTAGCCTGTCAAGTTTTGTTACGACAACATTTCTCGAGAGCATTAGTTTAAGCTTAAAAGCCAGTCTAATTATTTAAGAGAAGAATGAATGAGATATTAACTACTCCATTTATGTTAATATGTGTAATCTGTTGTAAACCTTAGATTTTTACAGGCTCAATAATTTCACTCGGATAGCAGCCTAAAACTTTTAAGAAACTGGTTACCTCTTTAAGTTCCGCTAATGCTTTTTGAGTGTTCTCGTTGTGCATATTGGCTTCGAGTTCCACGTAGAACATCTCTTCCCAAGGTTTGCCGTAAATTGGGCGAGATTCTAATTTTATCATACGAATATCGTGATTTTTAAAGACAACTAAAGCATCAACCAGCGCACCGGCTTGTTGAGTGGTGGTCATTAAAAGAAGTGTTTTCGTTTGTACTTGCGGAGAAACGTTGATCGCTTGTTTAGCAACAACAATAAAGCGCGTGATATTGTTGGTTTGGTTTGCAATGTCGG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGCGGGAGCGCGAGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.10,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //