Array 1 1517624-1518249 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020473.1 Clostridium sp. 001 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1517624 30 73.3 36 GCAAGTG.....G................. CCTTTTATATCTTTTTTTATCTGTTCTGGTTTGATT 1517690 30 100.0 37 .............................. TAGGTTATAACATCAACTCTAAACAAATAAATAATAA 1517757 30 100.0 36 .............................. GTTGTAAGTTTATCGCCTTTGGGCGTTTCTTTATTT 1517823 30 100.0 35 .............................. GGTTCTATTGAGGTTGGTGGTACAATTAGTTACAA 1517888 30 100.0 35 .............................. GCATAATAATAAAGTTTACCATAACAGAACTCTAA 1517953 30 100.0 37 .............................. ATATCTTGTAGTAATTTTTTATAATAATTTTCCTCTG 1518020 30 100.0 37 .............................. TGATATACTAAAAGAGTAGAAAAAAATATTAATAGTG 1518087 30 100.0 36 .............................. TACAGACACAAACGAAAAAGGCGAAAAGTTAATAAT 1518153 30 100.0 37 .............................. TTATACATTTTTAATATTTCAACTATATCCATACAAA 1518220 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 97.3 36 ATTTAAATACATCTCATGTTGAGGTTCAAC # Left flank : CTCTCCCCAGGTTTTTCTGTTGCATTGTTTTCTTGGTATATAGATATATTCGCCATCAATGTAATCCTGAATTTGAGATACAAGTTCTAATGACAATATATCTGCTGCTTTTTTATAGCCCAATTTCGTGCTCCTCCTAATATACATTTTTAGGATTGTACAGAGGCTATTTGTATTTGTGCAATAGCCTCTGCTATGCACACACAATCAATGTTAACACAAAAATGCTCCTTTCTTTAAGCTTTATATATAGTATATGTAGTCATTTTTTCTCACCTATTATTCTTTTTGCAATACCAAATTAGATAGCATTATATAAAAATCCTGTTCTTCTTTCATTTTTGCATTTTTAAATAATTCTTTTAAGTCCCAATATGAATATTTTAAGAATTGTTCATACAAGTTATTTTGTTTATTTGTTTTCTCCATAATAATCCTTCCAACAAATAATACTTTTATTATATCATAGGCTAATACATCACTTATATAAATAATTTTCT # Right flank : CCCACAGTAAAATAGCCATTCTTTATTCTCATTATAACCCTAAAGTCCTTAACAATAAAGGCATCCGCTGAAAATTTTCCAACCGTTTTTGAATTTTCATAAACTTATAAAAAAAGTGCCTCAATCCATTACATATCAATGCATTGAAGCACTTCAAAACTTCAAAGAGGTTGGAAAAATCAAAGTATTAAATTTTCAGTATTATTTTCATTTATCCCTAAAGTATCCTCCTCGAAACAGCTATCATTCATAAGCTTTATTATTGTGACAAAATCCTTATCCTTTATAATCTTATTTAATTCACTCTTCAACTTTATCATTTTAGAAGTCGTTATAGCCCCTCTAAAAACAGAATTCTGATGGTGGTGGAAATATTTCTTGCATACTTTAAATACCTTATTTACCCTTTTCTCATTTACATCATAAAACACAAAAGCATAGTTGAAATTAAAATTTTTCCCCATAAAGCTCCTCCAATTATCACATCATACTTTTCAGGC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTGAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 1531457-1529190 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020473.1 Clostridium sp. 001 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1531456 30 100.0 36 .............................. CATTCCAGTATTTGAATATCTTTATTTATTTTGCTA 1531390 30 100.0 36 .............................. TCACGCTCCTTTATTGCATTATACCACTAACCAATA 1531324 30 100.0 37 .............................. ATAGCTAAATATGGATATTCAATTTAGTCATAATTTA 1531257 30 100.0 37 .............................. AATGAAGCACAACTATTAATAGCACCAATAACACCAG 1531190 30 100.0 37 .............................. GAAGTCTGGTCAACAGCAGTATTAATACCAACAAATC 1531123 30 100.0 36 .............................. TAAAAAGTTAAGCCAAATTAAAAAGAAATTAGAACA 1531057 30 100.0 34 .............................. AAGAACCAAATAAGATATTGCGATCAAAAGATTT 1530993 30 100.0 37 .............................. TCAATATATTTTTGAATATCTGTGCTTTTTATATCTG 1530926 30 100.0 36 .............................. GTGAATTTCTCATTATCAAATTGTACTAATATATTA 1530860 30 100.0 36 .............................. AAAGAAAAATATAGAGTTTTTATTTTCTCAGCATGG 1530794 30 100.0 35 .............................. GAAGAGAAGTAGTTGGAACTAAGCGTAATGAGATA 1530729 30 100.0 36 .............................. GAATGGAGGGATTAAAAGGCATCATTAAAATTTTAA 1530663 30 100.0 36 .............................. TTAGGAACTTTTACAAGTAGGATATATACACTAGGT 1530597 30 100.0 34 .............................. GTATCTTCCTTTATACTTGCTTTATACCTATAAG 1530533 30 100.0 36 .............................. CTGATTAATGTTTTTATTTGATTTTCTACTTCTGTA 1530467 30 100.0 36 .............................. GCAGCTACTACAGGAAACTGTGCTAATTCAGCTACT 1530401 30 100.0 34 .............................. AAAATTGAAAAATCAATACCCATTTTTCCACCAC 1530337 30 100.0 36 .............................. GCATATCTTAAACCAAGATACCCCATAACAGTAACT 1530271 30 100.0 36 .............................. ACTCCCTTGTTATGAAGATTGGATTGTATTACGTGT 1530205 30 100.0 36 .............................. CAAGAATACATTTTAGCATCTTTATCATATACATAT 1530139 30 100.0 36 .............................. GCAACCAAATCCGATATACCCTCTTTAACATGATAC 1530073 30 100.0 36 .............................. TTCCATAGAGCCAATATAAGACACTTAATTTTTAAA 1530007 30 100.0 36 .............................. TATTTTATTTTTCTTATTGATTATATTATACTACAA 1529941 30 100.0 36 .............................. CATCCTAAAAAGTTATCTTTTATAGGTATTAACTTT 1529875 30 100.0 36 .............................. TAATAAAAATCACTCCTTAATATTTTATTTTGTGTT 1529809 30 100.0 36 .............................. TTAATTTTTTCGCTTATATTAATATTATTATTGCAT 1529743 30 100.0 37 .............................. ATATTATGAGTAACAATACAAATAATAATTATTATCT 1529676 30 100.0 35 .............................. TAATTAAACACTCCTTTATTTATTTTATATTACTA 1529611 30 100.0 37 .............................. TGCATTATTTTCAATGCTCTTTTTAAGTATCCTTTAC 1529544 30 100.0 34 .............................. AGTTATGTAGCTTTAGGCGATGCTGAATATACCG 1529480 30 100.0 35 .............................. GATTATTTATGCTGTTAGAGAAAAGGAGGGATTAA 1529415 30 93.3 34 .........T......A............. ATATCTTTTATAGGAGCTTGGACTATCTCAGCTA 1529351 30 93.3 36 .........T......A............. AAACACCTTGGGATAACTGTATGTCTTCATCATCTG 1529285 30 90.0 36 ................A.....GA...... AAGTAATAATTGGAAATAATATATTTTAAGAAAATT 1529219 30 73.3 0 A.......AT..T...AA....T......C | ========== ====== ====== ====== ============================== ===================================== ================== 35 30 98.6 36 GTTGAACCTCAACATGGGATGTATTTAAAT # Left flank : AAGGGTTATAAAATTACTAAATAAAAAGTTTAAGAATGTAGATGAAACTGTGATAGGAAAGGTAAAATTATTAGACAGTGATAGCCTAAATTCAATTATAGAAGACATATTTGACATAGAAACTATAGAAGATTTGAAAAGATATGGAATTTAAATAATAAAGTATCTTTAAAGTTTTGAAAGTAAGCTTTATGAACCGACCCCCAAAAGTTAGACCTAAAATCTAACGATTGGAGGTTGGTTTTTTATTTGAAATAAAAAAATGACTAGAGAGTTTTGAAAAAAACTTATGGTGTGCTTCAAACTAAATATCACGGGTAGATTTTTTCCAGCCTCTTTGAAGATAGAGGGTGCCTCAATACATTGACATGTAATGGATTGAGGCACTTTTTTTATAAGTTTATGAAAATTGAAAAATGGTTGGAAAGTTTTCAGCTGATACCTTTATTGTTAAGGGGTTTAGGGTTATAATGAAAATAAAGAATGGCTATTTTACTGTG # Right flank : ACTTTATTGGTATAACTTTGAATTATCGTCAAAGTGAGCATAGTTGAACCATAACAAATGTTGTATGAAACAGATTTGTTTAAATTAATTCTAAATATTTCCTAACACTTCAACTTTATTGGTTTTACTATGAATATAAATTTGATCTAGGTACAATAATATAAATGTAAACAAAATTTACTCTATAGAGGATATAAATATAAGAAAATATTGGATTATGATTATCGCCTTTTTTATCATCTACTTAGTAAAATCAACAATAGATATAGATTTAAAGCTAACTATAAAAAGATAATCCTGTTACACTAAATTTATCTAAAAAGCTCCTTGTATTTGCAGGACTTTCCATAAATTAATCGAATAATAACATATATGGAAGACAAATTTTTGTAATATACAAATGAATGGAGGGTGATTATGGAAATAAATGAGATAAACATTAAAGTATACATCCTAGAGAATATTCCCATAGAACAGGCGTTGGAAGATTTAAGCAAATT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTCAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 1536202-1532927 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020473.1 Clostridium sp. 001 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1536201 30 100.0 36 .............................. AGAGATAACTAAAGTTAATCATTAATAATTGTAATA 1536135 30 100.0 36 .............................. TGATAATTCGCTCCTTTAAATTTATATTTTAAATCT 1536069 30 100.0 36 .............................. TGTTCTGCGGTAAGTTTTCCTTTAAATCATCTATAC 1536003 30 100.0 34 .............................. AAATTTATAACATTTCTTCCATTCTCTCTTTTAG 1535939 30 100.0 36 .............................. AGGAACTTTTAACAAAATATAGTGTATCCATTTTGA 1535873 30 100.0 35 .............................. GGTGTTTTAATAGGATTTAACGGTAATGCTTTTTC 1535808 30 100.0 36 .............................. TTTCGTAGCTGTAGATATTGCAAAAGCGCTTGGATA 1535742 30 100.0 37 .............................. GTATGCTTATACAAAAAATATACATCACTTATTACCA 1535675 30 100.0 36 .............................. AAAATAATTTTCAAATACTAGATAGAAGCTTCTACG 1535609 30 100.0 35 .............................. CTTAAAGTGTCTAATGATCTATTTAATTTTTCTTC 1535544 30 100.0 36 .............................. TTGCTATCCATAGCAGTTATTAATTTTTCTTTTATT 1535478 30 100.0 37 .............................. AGCTCCAACAGCTATGGGAGTAATCACGGACGTATTA 1535411 30 100.0 35 .............................. ATAGATTTGAAACTGCCAATATGAAAGCAGAACAG 1535346 30 100.0 38 .............................. ACAATTTTACTACCAGTACCCTCTATAGAACCAGAAAT 1535278 30 100.0 36 .............................. GCATATCTTAAACCAAGATACCCCATAACAGTAACT 1535212 30 100.0 36 .............................. CCGTCAATAGAACCTCCCAAACTTTTTATATTACCA 1535146 30 100.0 37 .............................. CATTTCTACCCTTCTTCAAATATTCAACAATAGTATG 1535079 30 100.0 37 .............................. CATTTCTACCCTTCTTCAAATATTCAACAATAGTATG 1535012 30 100.0 36 .............................. AAGCTTTATTTAAACTTCCCTTGTAGTCCTCTGCTG 1534946 30 100.0 39 .............................. GCATATTTATAATATGCTTTACTCACTAAAGTTTCTAAT 1534877 30 100.0 37 .............................. TTTTATAATCATTTAAAAATAGTTGAACATCATTTTT 1534810 30 100.0 36 .............................. GATATTACCTAAAAATAATATAACTACTGTAATTTG 1534744 30 100.0 37 .............................. CACTAATACAATTATGAACAATATATTATCTCATAAT 1534677 30 100.0 37 .............................. TGCTTTTTAAAAGATATATTTTTAGATTATAACAATT 1534610 30 100.0 36 .............................. AGTTCAAGGTATTGAAACCTTAAGGCTCTGTGTCCC 1534544 30 100.0 36 .............................. CGTCTAGCACGCTTTAAAACCTTTAATCTATTAATA 1534478 30 100.0 37 .............................. TACGATAAAGCAGAGGAAGGGAGAGCAACGACCAAGG 1534411 30 100.0 35 .............................. GAAGTTTGGTCAACAGCAGTATTAATACTAACAAA 1534346 30 100.0 35 .............................. GATGATAAAGACACTATTGCACAAACTCTTACATT 1534281 30 100.0 34 .............................. AGTGCTAATGGATGCATATTTACGCCAGTTCCAA 1534217 30 100.0 35 .............................. ATTTACAAAGAAAGATAAGACGGGAAATATAAAAA 1534152 30 100.0 38 .............................. AAAACTAATTATAGGTAATGCTTTAAAAGAATATAAGG 1534084 30 100.0 37 .............................. AAAGCATATTTCCCTTTACTAACCCAATCTTGAACTT 1534017 30 100.0 37 .............................. AGACCACTAAAATCACCATCAATAGAACCTTCCAAAC 1533950 30 100.0 36 .............................. GAAAAATGTATTATTTTTACAATCTATATATCCTGG 1533884 30 100.0 37 .............................. TTAAAATTAGCAACACCTTCAGCAATCAAATCAGATA 1533817 30 100.0 36 .............................. TAACACCCCACCTAATAATTACCGCCCATTTCTCAA 1533751 30 100.0 35 .............................. CCAGATGATTTTGTGTTAATTGATTCTAAATCTAA 1533686 30 100.0 36 .............................. AAAAATTAGAGAAAGTCTTATGAGTTTATATGCTTA 1533620 30 100.0 37 .............................. AAAAAATGACTATTTAAATAATAATTTAATCAATATT 1533553 30 100.0 35 .............................. TTACAAAAATATTTATGAAAGAAGATATGTTATAT 1533488 30 100.0 37 .............................. AACTACAATGCCTTAAATATATAAAAACTATAGTTAA 1533421 30 100.0 36 .............................. CTTTTTTAAGACTTTACTTACAACTTTTCTAAACTT 1533355 30 100.0 36 .............................. AAATACTTTTTTTCTACAGACTTTTCAAGAACTTTT 1533289 30 100.0 36 .............................. AGTTATATGAGAATTGCATATACATCAATATGGACG 1533223 30 100.0 36 .............................. AGCTTTAGTATAATATGTTCCCATTGAGAACGCCGA 1533157 30 100.0 38 .............................. GAAGCAAAAAAAGCTTTCTTTTGGGTGGACACAACCAA 1533089 30 100.0 36 .............................. CTACTCCAGTAGAAAGAACACTTACAAGTATTGCAC 1533023 30 96.7 36 ...............G.............. TCTGGGACACCTGTTGTAATGCATTTGAATACATTC 1532957 30 80.0 0 .........C.....G.T..A.T...G... | C [1532932] ========== ====== ====== ====== ============================== ======================================= ================== 50 30 99.5 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : TTTTTATTAGACATGTCAAATTCATATCGCTCATAAGGCTTTTTTAAGGTAATGTTAAATTTAGTAGGAAAATTATTTTTTGTATATTCTGTAAAATAGTTTCCGTCTTCCGAAACATCAATTTTACTTAAATCGCTTCGCCACTCATATTTATTGTTATTTGTAACTACTTCCCATACTTTTTTAATATCTGCTTTAAATGTAGTTGTAATGGTTGATTCCTTCATAATAAACATTCTCCCTCATAAATTTACTATTTATCTATACGGTGTACAAATAAATTATACTATTTTATACAATATATTACTATATTTTGTTAAGTATTTTCCAACTAATTTTGGTGATAGAGATGCCTTAAGCCATTTAAATTCAATGGACGGTGATACTTTTTTTATTGAGTTTATGAAAAGTGAAAAACGGTTGGAAAATTTTCAGCGAATGCCTTTATTATTAAGGACTTTAGGGATATAATGAAAATAGAGAATGGCTATTTTACTGTG # Right flank : AAAAATAATAATCTGTAAATTTTAAAAAATATGTTGAATAGAAAAACATAAATGCTTTATAATTAATACTAAGAAGGATAAACATAAGAGGATGTGGATAAGATTTGATAAAGAAACACGATTTTGATGCAGCGTGGAAATCAATTTTGGAAGCCTTTGAAATAGAAATAGTAGAACTGCTTTTTCCGGAGATATTTAAAAATATAGCATGGGAATATGGAACAGAATCTTTAGATAAAGAACTTCAAGAAATACAAAGAGAAATTTTTGATAGAGACAGTAGTGAAAAAGTAATATCAGATAAAATAATAAAGGTAAAATTAAAAAATAATAAGAGTAAAATATTGTTTATACATGTGGAAGTACAAAGTTATGCCAGCTGTGATGAAGTATTTGGAGAGAGAATGTTCAGATATTTCTATAGAATCTGGGACAAATTTAGGTATAGGTATGAGGACAAATCGGAAATAGTGGCAGCAGCAATATATACATATAAGGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //