Array 1 97477-95783 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAHFH010000003.1 Pontiella sulfatireligans strain F21(T), whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 97476 33 100.0 33 ................................. AGGAAAAGCTGGCCGGTGCCACCACCGAGCTGG 97410 33 100.0 33 ................................. ACCGTCGCGCCGGGTATTCCCCCGGCAACGCCG 97344 33 100.0 33 ................................. TGGAAAATGTGGGGCTTACGGGCGATGATATAG 97278 33 100.0 34 ................................. TGATTGCTTTGGGTTTGTATTTCGTGGGGGTTAT 97211 33 100.0 34 ................................. ATAGAGTATCTAGCGGTAATATACGTGACGATAT 97144 33 100.0 34 ................................. ACATCTATTTTCCGGGCTCTGATATACCTCCTGA 97077 33 100.0 33 ................................. AAATCCAGCTGGAATGAAGGAATCGTGAAATCG 97011 33 100.0 33 ................................. CTCCGGACAACACGCTACAATGCAGCCCATACA 96945 33 100.0 34 ................................. ACGCGGGTGTACCAAGGTACTGCTTACCGTGCCC 96878 33 100.0 32 ................................. CGCCGATCAAGTCGAAAGCGCGAAACGCGAAC 96813 33 100.0 34 ................................. AACGCCTCAGAAACCGGAGCTATATAATTGACAA 96746 33 100.0 33 ................................. GGTTGATCCGTGTGGTCGTTTGGCGGTGCCTGG 96680 33 100.0 33 ................................. TGACAAAGCCTTGCTCCGTCATAACGGCATGGC 96614 33 100.0 33 ................................. TTTGATCTTTCCAACGCATATGAATTTTTACAG 96548 33 100.0 33 ................................. TGGTACCAAAACAAAAGGAACTCCAATGATCTG 96482 33 100.0 34 ................................. TCGTAGGTTGCTGGGTTATTATGACCTGCGCATA 96415 33 100.0 33 ................................. ACGCCGGGAAAGCGCCTTTTGCTGTCGCTGTTT 96349 33 100.0 33 ................................. AAGACTCGTGTATTGGCCCACTCCGGCGGTGAT 96283 33 100.0 33 ................................. ATCCATGAACTGATCAAACTCGGCATCACCATA 96217 33 100.0 33 ................................. CCATACAGCCCATAGTTATCATGTAACATACAA 96151 33 100.0 32 ................................. TTCCCCCCGGCCAAAATCATTAAACTAGCCCC GGGGCG [96127] 96080 33 100.0 34 ................................. GGTCTGTATTGGATCCGTGGTCGACGGTAGACAA 96013 33 100.0 34 ................................. ATGATAAAAAACATTATCAGTATTAAACATTATT 95946 33 100.0 33 ................................. TTGGCGTGCTGTATTGCCACGTAGCCACTATGG 95880 32 97.0 33 ...................-............. TCAACCGCCTAAAGGCGGGACTACAAACCTTTT 95815 33 93.9 0 ........T.............T.......... | ========== ====== ====== ====== ================================= ================================== ================== 26 33 99.7 33 GTCGCCCCCCGCACGGGGGGCGCGGATTGAAAC # Left flank : GATCTCAAATCTCCCAAAGGGAGTCCTATGCTAGTTTTAGTCAGCTACGACGTATCCACCATCAACAAGCCCGGACAGCGACGCCTCGCACGCATCGCCAAAACCTGCCTCAACTATGGCCAGCGGGTCCAAAACTCCGTTTTCGAATGCCTCGTCGATTCCGCCCAATGGACCACCTTTCGCGCCGAGCTTCTCCGCCTTTACAAACCCGAAGAAGACTCCCTCCGCTTCTATTTCCTCGGCAGCAACTGGGAGCGAAAGGTCGAGCATCACGGCGCAAAGGACACCCCCAATCTCGAAAGCGGCACTCTGATCATCTGATGTTGCGAACCCCAAGCCTCCGCCAAAACCCCGGCAGGTTCGCAAACCAGCTAATCCGTTCTCTGCAAACGCTCTAACCAACTCTGTTCTTTGACAACTGAATACTGAATTACAGAATGCGGACGGTTCGCGCAAACGCGGCCATTGACTCCATGCTCCCAAGCGCTTACAACAGCACC # Right flank : AGTTCTCCAAACTCGTCGTTGATGCGTGAGTGGAGCCGCCGCCCTGCTCACGCTCGTTGAGCGTAAGAGCCGGAAGCTGATCATCCGCAAGATCAAGGACAAGACCCCGGCTGCGGTGAGTCGGGCCATCAATGGCATGAACGCTCCATGGGCAAGGAGGCGTTCTCAAGGTCGTGTGCGCAAGTCCATTACGGCAGACAACGGCAGCGAGTTCCTTGATTCCGCGGCATTGGAGGCATCTGAATTCGGGAGTTCGGCCCGAACCCACCTCTATTATGCGCATCCCTATTCGTCCAGGGAGCGGGGCAGCAACGAGAATACCAACCGGATGATTCGCCGATTCATCCCCAAGGGAAGCGATATAACCAAATGCACCCGCACCGCCATTCAGGAAATCGAGAACTGGATCAACCGCTATCCACGCAAGATACTGAATTTTAAAACCGCGGAAGAGTTGTTCATTCAGGAGATCGCTGCATGAGACGCACCTGGCTCAGAAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCACGGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.00,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA // Array 1 134276-131538 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAHFH010000002.1 Pontiella sulfatireligans strain F21(T), whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 134275 36 100.0 30 .................................... GACGACCTCGTGCAGGGTCTGATCGACACC 134209 36 100.0 30 .................................... GTCCCGCGCCAGGGCCTTCGTGCAGACGGC 134143 36 100.0 30 .................................... ATCGTCCATCAGCTCCGCCGCCCGGAGGCT 134077 36 100.0 30 .................................... GGTGATAGGCGGTGCGTTTGCTCATAGGGC 134011 36 100.0 30 .................................... CATGATAAGGGCTTCCTCTTTCGGGATGCC 133945 36 100.0 30 .................................... GAAGGCTGTGATAGCCTTTGCTCTGGCCAT 133879 36 100.0 29 .................................... ACGCGGAAACCGGGCTGCGCATCGAGGGC 133814 36 100.0 29 .................................... GGCACAACGCCTGCTCCGACTTCATCCGC 133749 36 100.0 30 .................................... CTCTACTCCGGCATCATCGCGAGCGGCAAC 133683 36 100.0 30 .................................... ATTCTCCACCGCCGTTCGTTGGTCGTCGCA 133617 36 100.0 30 .................................... GATTCCGGAGCGAAGTACGACGAGTGGGAG 133551 36 100.0 30 .................................... ATTCCACAGCTGTTCGATCAGCTCCTGCAC 133485 36 100.0 30 .................................... GTTGACCCGTGGAAGCTGTACCATGTTGAG 133419 36 100.0 30 .................................... ATGGTTTCCGGAGACTCGATTAATCACCAC 133353 36 100.0 30 .................................... ACGATGTTGCCGTACCGCTCCAGCCCCTCC 133287 36 100.0 30 .................................... ATCTACAGCAATCGGGAATACGGTCCGGGC 133221 36 100.0 29 .................................... ATCGCGCCGGCAAACTCCGCGCTCTTGGT 133156 36 100.0 30 .................................... GCGGAGCAGTTCGATATTGAAACGCTGGCG 133090 36 100.0 30 .................................... CTGATGATGACAATCGATTACAGCCGCACC 133024 36 100.0 30 .................................... GCCGGTGTTATAGGTGGTCTCCACAATCAC 132958 36 100.0 30 .................................... AAGCTTCATTACTGCGTGTGCTGCAACTAT 132892 36 100.0 30 .................................... GCGGAGCAGTTCGATATTGAAACGCTGGCG 132826 36 100.0 30 .................................... GACGAAGCGGTCGGCTTCGATTCGCCAGCC 132760 36 100.0 30 .................................... ATTAATAGTGGCGCCCATTCCGCTAACCTT 132694 36 100.0 30 .................................... CGGTCGAGCCCCCGAACAACAAGCATTGGT 132628 36 100.0 30 .................................... CAGCGTATTGAATCCCATGGCATCCTTCTT 132562 36 100.0 30 .................................... TTTACCACACGGCACCGTCACCGGCCGGCG 132496 36 100.0 30 .................................... TTGCTGATTTTTGCATTTTTTGCACTCCGT 132430 36 100.0 30 .................................... TACGAGTTGGACCACAGCTTAATGTTGGAC 132364 36 100.0 30 .................................... GATGGTTGTTTCATACACATCGCCAACGTT 132298 36 100.0 30 .................................... TCGCCTGTACATCCGAATCGCCAACCCCGA 132232 36 100.0 30 .................................... AAAGCTGGGCGACACCCGGTTCAAGGGCGT 132166 36 100.0 30 .................................... CGAATGGGAAGGATTTAAGATCCGGGAAGT 132100 36 100.0 29 .................................... GATTGGGATGATTTGACGCCTATCGGCTC 132035 36 100.0 30 .................................... TTCCTTCATCAAGACCGCAAGGGTCTTTCA 131969 36 100.0 30 .................................... CAATTTGAAAAATGCCGCGCCTGTAGCCCT 131903 36 100.0 30 .................................... TAAAAAGAAAGCGTTGATGCGGTATAATTC 131837 36 100.0 30 .................................... ACAGCAAGTCCTCTTCCCACAAGCAAAGGT 131771 36 100.0 30 .................................... GGGGTCTGGTTTTTGGGGGGTTGGCTGTCT 131705 36 100.0 29 .................................... TGTTTCCGAAATGACAAACAACGCCGCCA 131640 36 100.0 31 .................................... CCTAAAACCGCACTGCACACCGAATTTCTTA 131573 36 88.9 0 ............................G....TCT | ========== ====== ====== ====== ==================================== =============================== ================== 42 36 99.7 30 GTTGTGGATTGACAGTTCTTTGAAATAGAAAGCAAC # Left flank : GACTATCCTGTAATGAAGGCGGTCTCGGATGTCGGAGGTGCGGCTTAACGCGTATCACATCATGTGGTTGTTTGTATTTTTCGATCTGCCGACAAACACGAAAAAGGAGCGCCACGATGCTTCCGTGTTCCGCAAGCGGTTGTTGAATGACGGATTCACCATGATGCAGTATTCCGTATACACACGGCACTGCGGCAGTACAGAAAGCGCCGATGTGCATACGAAGAGGGTAAACAAGCTGGTTCCCTCAAAAGGGCAGATCAGTATTCTTCGGATTACCGATAAGCAATATGGCAACATAATCAATTTCTGGGGGAAGGCGACAACTCCTCTTCCGCCAAAACCGAGCCAGCTGGAATTTTTCTGACTGGTGGTTACTGTAAAGAAAGGTAGAATGCAAAAAATGAACTGGGAATGTACTTCATGGTTGGTGCCATGCCGATTTTCTTTGAGACATGCAACTGCTAGCTCCTTGGAAAACAGAGGGTTACGGCGGCTAT # Right flank : CTCCCTCCCTCGCCAAGGCTCCGCCGGACAAGTCGGGAAGCGCGCGCTACACTTCTGAACGCGTGAAGACGGGCGCGTCGGGTTTGGAGAGGGCGGCATCGCAACGATAGCCGTCGGCTGCAAAGTCCAGCAGGCCATCTGAATCCTTGATGCGGTTTTCAATGATGTAGCGCGCCATGCGGCCCCGCGCTTTTTTTGCGTAGAAGCTGATGATTTTGAGCTTCCCGTTTTTTTCGTCTTTGAAGACCGGCGAGACGATCGTTTTGTTGAGCGCGCGCTTGTCGATGGCCTTGAAATATTCCTGCGAAGCCAGATTGACCAGCAGGTTGCCTTTGGCGGCGTTCAGCTCTGCGGTGATCGTGGTTTTCCAGAATTCGTAAAGGTTTTTTGCGCCGCGCGTTTCGAGCGGACGGCCCATTTCGAGGCGGTAGGGCTGAATGAGGTCGAGCGGCTTGAGCAGTCCGTAGAGGCCGGACAGGATCTGCAGATGCTCTTGCGCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGATTGACAGTTCTTTGAAATAGAAAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //