Array 1 173992-174621 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHOP01000005.1 Companilactobacillus jidongensis strain 204-8 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 173992 36 100.0 30 .................................... CCCACACTATGCGCAAAACTGGGGCTTATC 174058 36 100.0 30 .................................... CACGGAATCAGACATACAGCATGTTCCCTC 174124 36 100.0 30 .................................... AATTGCTATTTTCAATGAAGTCATCAAATT 174190 36 100.0 30 .................................... TTTTAAGCACCACATCTTGCCTTCACTAGG 174256 36 100.0 30 .................................... CCACCATTGCATTAATCCGATGTGTGGTGC 174322 36 100.0 30 .................................... CTGCCTTCTGTTAAAAAGAAGTGAACATAG 174388 36 100.0 30 .................................... ACGTTTTTAGCTTTACAAGCGGGATTTAAA 174454 36 100.0 30 .................................... TTGTGTAGCTGTAGTAACAAGAGCTAAGTC 174520 36 97.2 30 C................................... AAATTCCTTGTTTTCACCTACTGGTAATTC 174586 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 99.7 30 GTTTTAGAAGTACGTCATTTCATGTAGTTAAGAACC # Left flank : AGTTTTGAACTCAACTCAACTGGAAATTTAAAATTGGTTCTTCAAAAAATCGTCTTTGATAACCAAATTATCAATCAAGACCGGATTGAAAAATTGAATCATGAAATTAATGAACTCATATTTGACTCAACAAGTAGTTATGATGAAACTTTTGAATATGATCTATTACCTGAATTAATAAAATTATTAAAATCCAAAGATTTTAAGATAGATAGTAGTAACTGGCAGAATTATTATGATAAACTTCAATCAGTAGTTAGATTTTATGTAGAATTTAGTGATAAGAGATTATTACTATTTCATGGGTTAGAACGCCTATGTAGTTTAGAACAACTTAATGAATTGAATGATTACCTGAAATCCATCAAGTTAGCTGTAGTGAGTCTCGAATCGTATCCAATGACGTTGAAGAAGTCCGGCCTGAACACCCGAATTTATTCGATTGATGAGGATCACGTTCGATTTGACTATTAACACTTAAAGTTAACGTTAAGTAGGTG # Right flank : CAGCACCTGGCCACAAAAACCAGGTGCTTTTTTCATCCCCAAACAAAAAAACACCCAACCAAAAATCAGTCAGGCATCCCAATCAAAAATTTACATATCAACCTTAAGAACATCTTCAACGTTCTCATCAAAATCAATAATCATATCAGCAACTTCTTCAGGTTTTTCGATCATACCAACATGACCAGCACCTTTCAAATCTTTCATTGTAAGATGTGGCACACGTCCTATTGTTGCCTTAGCGTCTTTAATTCCGGCTTCAGTCAAGATTTGATCGTCATCAGAGAAAATAGCCAATGTAGCAAGATCTGTAGCCCGAAGGCGTTTGTTCATTGCTTTATCTTCCAAATAATTATTGGCCATGTTACTTAATTTTTTAGCAATCTTACGATCAACAGCATTGGCAGCATCATTGATCACGTTAGGATTCTTCAACTTAGAGGTGTCAAAATCCTTCGCAAAGTACAAACCAGCTTTCACTGGTGACTTGGCCATTTTAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTACGTCATTTCATGTAGTTAAGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 6027-7223 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHOP01000018.1 Companilactobacillus jidongensis strain 204-8 contig18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================================= ================== 6027 36 100.0 30 .................................... CCAGAAATCAAGAACACAAAGAAGAAGACA 6093 36 100.0 30 .................................... GACGAGGAGTTGGTGGGTTATGGATTTAAA 6159 36 100.0 30 .................................... CTGGTGTGATAGTAATATCAATATCATTAT 6225 36 100.0 30 .................................... ATTGTTTCATTGATTTTGAATAAGCCTACT 6291 36 100.0 30 .................................... TGATTGAATAACCATTTCGTAATTGCCTTT 6357 36 100.0 30 .................................... TTAATTGATTAAAATAAAATATCATTTAGA 6423 36 100.0 30 .................................... CATATATGACACCTAACGTAATTTTTGATG 6489 36 100.0 30 .................................... ATCCAAAGTCTGGATTGGGCAGGATAACCA 6555 36 100.0 30 .................................... AAAGAGTTACCCGATTTATTAAAAGACGCG 6621 36 100.0 30 .................................... TGGCCAACTGTTATTGATGGTGTGGAAATA 6687 36 100.0 30 .................................... GTTCGACCTTGTCAGTAAAGATTTGAGCGT 6753 36 100.0 30 .................................... TATTTTAGTTTCTAAAATTTCACCTGGTAG 6819 36 100.0 30 .................................... CATTTCTAACGGATTAATTTTGAACTCTTC 6885 36 100.0 30 .................................... TTAAGGTTGTTCAAGATAATGATAAAAATT 6951 36 97.2 30 .......................A............ ATAGTCAACTTTATAAACAGGCTGGCAATT 7017 36 100.0 71 .................................... TACATTCGAAAAATTATATGAATATTCAATTGTAAAAAGAATAGTAAGCAAAGGGTGTATCATGTTAGAAT 7124 36 80.6 25 AC.AGA.........................T...T AATGAAGTTATAGTTGTTGGAGTTT ATA [7134] 7188 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ======================================================================= ================== 18 36 98.6 32 GTTTCTGTACTCTTAAAGATTTAGCAATGATAAAAC # Left flank : TTAAGTTAAAAAATAATGGTAATCCGACATGGATAGTTATGTACAACATAGGTAATATTGTTTCATCTGTAGATGAAGCAGATTTTATTAATGCTTTAAAATTATTGATGGATAATTATGACTTAAAAGTAATTTTTATAGGTAATAATCTTGTAAATATTCCAATAACTGTAACAGAAATAGGAAACATAGTTGTTTCTGCTCAAGATTTTCATCAGTTATTACCTGTTGATGAATTATTTAGGTCAGTTAAAATGAGATATCCGAATGAGTTGGATATTGAAACTTTAGAATTTACGGAATGTGTAAAGAGAATTGTCTCTTTTGTGGGAAACGATGAAAAAGTGCATATTTCTGGCAAAGATTTGGTATTATTGAAGGTAGTAAATGAGATTTTAAATTATGAGACGTCATACTCTTTAGATGATCATTTGCTGACTAGTGCAGAAACCAAATTTTTGGAGAATTAGCTTATTTTAGATAAATTTTTTTAATTTGAG # Right flank : AGCCACTCTGATTTCCTAAAGAGGAAAATCAGGGTGGCTTTTTCTATACTTAAATCTATTTATATTTCTCTTCCAATCCACTCATCCAAAGCCCCAACAACGTACCAGCTACGAACGCAATAATGCTCAAAACAATTGTAGTGCCAGTAACTCCAGCATAGGAGATACTTTCAGAAGAGTAGGGGTTAGGAACCAATATCAATATAGTACTTGCTAATACGATTCCCAGAATAAAGTGGTAAACACGTGAATGATGATTCTCAATTAAGTATTCCATTCCTTTGGAAAACAACACCATTGAGATAATACCACCGATAGCAATAGGCAAGAAGACACCGACAATATCGAAATTCTTAAATCCTGTCAGCATTGGTGTATATAATCCTAATATCAATAACAGATTAGAAGGACTGAGTCCTGGAACTAGGACCCCCAATGCTATCAGCATCCCAGCAATGGTGAATCCAAGGAAGTTGGCGGGGATGGCACCAAATATTTTA # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTGTACTCTTAAAGATTTAGCAATGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //