Array 1 2050107-2049021 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018180.1 Liquorilactobacillus nagelii strain TMW 1.1827 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2050106 30 96.7 36 A............................. GCAGAATAGGCGAATTATATGGCCTAGTTTATGAGG 2050040 30 100.0 37 .............................. GAAAAACACTAGTGATTGAAAAAGATGATGAAACCAT 2049973 30 100.0 35 .............................. GAATACTTTGTTGCCTAATGGGTCATCATTCATCG 2049908 30 100.0 35 .............................. TTATTTTCACCTCTTTTCAAAATTAATTTTAGCAT 2049843 30 100.0 35 .............................. TTTGCCCCGCCAGTAACAGTTGTGCTTGAGCCAGC 2049778 30 100.0 37 .............................. GTTGGTAAGTCATCTGAACCTAATCGTTCAGTAATCA 2049711 30 100.0 38 .............................. CTTGGCCTTTATCCGCCCATGCTTCTTTCATCGGGTCA 2049643 30 100.0 33 .............................. AATCAATACCGACGTAGTACGTTAAATCATCAG 2049580 30 100.0 37 .............................. GCTTCCTACCGCAAACTGGGCAGTAATGGATGATTGC 2049513 30 100.0 36 .............................. TAAAATCTTTGAAATCTTTAGGCGTCTTAATTTCAA 2049447 30 100.0 36 .............................. TTTGAAAACACAATTGTTTTATCCATTTTTCATTTT 2049381 30 100.0 37 .............................. AACTCATCAAGCGTATCGTCAATTGCTTTCTGATTGG 2049314 30 100.0 37 .............................. ACTGCCAGTTTTGAGTGCATGGTCTACAGCTGGGGTT 2049247 30 100.0 37 .............................. TCAAAAGTAAGATATACTCCAAATCTTTTTTCAAACT 2049180 30 100.0 35 .............................. AGATTTTTCTAATGGCGGTAAACCCCAAGGAACAC 2049115 30 96.7 35 .............................T GTGGCAACTGGAGCAAAACGGTAGAGGCAGAAACT 2049050 30 93.3 0 ............................GT | ========== ====== ====== ====== ============================== ====================================== ================== 17 30 99.2 36 GATTCTATTTAACTTAAGAGGAATGTAAAG # Left flank : CAAAGTAGATGCGTCGGATTTGCTGGTATAAAACTTGGCGGCGCTTAAACTGTTCGGGCTTAGTCTGGTGCTGGTACTGATAGTAGGTTGATCGACATAAGTGCAACGTCTGACAGACTTCTTTAACGCTATGCGCTGATGCCGTTACTTTAATAGCTGACTGCCAATCTTTGATACTTACTTTTTTGCGAATATGGTTAATGCTTTTTTTAGGATATCGTTTTCACTTTCCAGCTTGGTAATTCTTGCCTGCATTTCTAACAAGTCGGACTTGGAGACCCCGGTATCATTATCTTTCTTGTACAAATCATTCCATTTATAAATGGTGGCACTGGCGATCCCATATTCGCTGGTAAGATCAGTGACTGATGTCCCGCTTTCATACAGCTGAACGATCATTTTCTTGAATTCGACAGAATATATCTTTCTTTTGCTCATAAGACACGATCCTCTCTAGTAGAAATTCTATCAAATCGTGTCTACACTTTCATCCTAAGTCC # Right flank : TATACTACCTGCAGGTTGAGTAATTCTTGCTCCCATATTTCTTATAAATTCTAACCAAAATGCCGATTAATATTCTGCTGATACCATATTTTCTCGTAATCACAGCCTTAACTTCAGCGTCATTAAGGTACTCTTTGACTGCTATAGTTTTATTCTCAATACTACTTTTGTCATAATAAATACCCCTAAAGTCGAAACGTAACTTTAGGGGTAAAATTTAATTTTCTGATTTAAAAATCAAAAATAAGGTTCTAGATCATTAGATTAAAGCTTTAAGTACGTGTTTTTTACACTGCACTTAGTCAAAAGGATATTTCATACCCCAAGCATTTCTTACACTATCTAGAATATGAGCAACGTCGCGTGAAATTGCCAGCTGACCGTCATCATGTCCATTAGCAATATAACGTTGCATATCGCGAACCTCATATCGTAAAGCCTGCGTACCATCACCGGAGCTCAAAGTCTCTGTAGTTTGGTCATGGGCATCTGCAGTATAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCTATTTAACTTAAGAGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 2051380-2051942 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018180.1 Liquorilactobacillus nagelii strain TMW 1.1827 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2051380 30 100.0 36 .............................. GGTAAATAATTGAATTAATTGTCTTATTATTTAGTT 2051446 30 100.0 36 .............................. GTCGTATGTTTTTCTTGCTTGTCGTACCAAAACATT 2051512 30 100.0 38 .............................. TCTTTTTCAACTACTTCATATTTGATACTTCGAGCTAA 2051580 30 100.0 36 .............................. ACGATCAAACCGTTATTCATAACGATATGAAGTCTA 2051646 30 100.0 37 .............................. CTAAAATCATTTTGTTGCTTTGAATCGTCATTTTAGT 2051713 30 100.0 36 .............................. AGCTTTGTGACTGTTTTTTATTGACATCATAATTCA 2051779 30 100.0 38 .............................. GCTTTTTTATCTGTTGGAACAATAAACTTGTAATTGTC 2051847 30 100.0 36 .............................. CCATCAGTAAAGTCAAACCTGACTCGACCCATGTCG 2051913 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 9 30 100.0 38 CTTTACATTCCTCTTAAGTTAAATAGAATC # Left flank : CAACCATCATGGACTTGTATTCTCGCAAAATTATCGCTCATAAATTAAGCCGACACATGACAACCGAGTTAGTTGTCAACGTACTTAATCAAGCTTGTGAAACTAGAACTGTCAAGGCTGGTTTGATTCTGCATACTGATTTGGGCAGCCAGTATCGAAGTACTGCCCTTGAAACAGCATTGAAGCAACACGCTATCCGGCACTCTTACAGTAAACGTGGCTATCCGTATGACAATTCTGTGGTGGAGTCATTTCATGCCAGCTTCAAGAAGGAGGAGGTTTACCAACGGACTTACAAAGACTATCATGAAGCCAATTTGGCTCAGTTTAGTTACATTGAAGGATTTTATAATTCTCGGCGGATCATTAGTGCCGATGGCTATTTAACTCCAGATGAAAAGGAACAATTAGTCAGTTAGAAATTCTACGTAATCGTGTCTAAAAACTTGACTCAGATCCAAATCTCTAAACGTTTTAGTCGAAGGCACGACTATTTCTAC # Right flank : CCATATACATTGAAATCCCTATAAAATCAATACTTTTCATCTACATTCTGTCGACCATCTCACCTATTGTCTATATTTAAATATTACCTTTTCCCATATTTTCTTTCAAGCCTAATAAATTAAGCTTCATCTTCTCTGTCAGTCCCCCCATAGATTTGAACTATTTGAGGTCGACAGACAAGTTAAATTCAAAAAAAATTTGATGTTTCATCAGACATATCTAGGCCAATAAATTTTTTATCAAGCCAATTTTTGTTTCGATTTTTAAAAATAATTATCGAATCTTTATCATTTCTGACCCATTTATCCAACTCCGTAGTCAATTTTTGTAATTGTGACTTGGTAAGTTCCCCTTCAAAAACCGATTTTTGCACATGGCTCAGATATTTTTTGCAAATTTTAAAAACATGTCTCAAAACTTTAGCTCCATTCTGATCTAAAGCAATGTCGTAAACTAATATTATATACAACTAAAATCACCACCATAATTTAAAAGGTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACATTCCTCTTAAGTTAAATAGAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //