Array 1 1-679 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHQ01000027.1 Bifidobacterium adolescentis strain 150 contig027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1 35 97.2 36 -................................... ATCACGAAATTCCACGGAGCGTTACGTGTCAACAGA 72 36 100.0 37 .................................... GAACGTCATCGCCAACATGGGCGCTGAAATGGCCGCC 145 36 100.0 35 .................................... AAGGCCTTGCGCACACGTTCGCGCTGCTTCTCCTC 216 36 100.0 36 .................................... CGGTCGGACAGAATCGGCGCGTTCATAATTTCGCTG 288 36 100.0 39 .................................... TTCGGTAAAGACGCCGCTAGCACTCTTGCAAAGCCACTC 363 36 100.0 37 .................................... TTTGCCGATTGGTGCGTTGGTTACTGCATCCTTGTGA 436 36 100.0 36 .................................... ATACCCCTCTTCGGCCAGTTTAGCCGATAATGTACG 508 36 100.0 32 .................................... TGAGTTTCCTGACATGACGGCTTCGCAATTAT 576 36 100.0 35 .................................... GGAAGTGTCGGACGGCAGCGGCTTCAATGAGCCGG 647 33 91.7 0 .................................--- | ========== ====== ====== ====== ==================================== ======================================= ================== 10 36 98.9 36 TCCTCAATGAAGTCCTGAGCTTGAATGCTCAGGAAT # Left flank : | # Right flank : | # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCTCAATGAAGTCCTGAGCTTGAATGCTCAGGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 27694-27225 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHQ01000017.1 Bifidobacterium adolescentis strain 150 contig017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 27693 36 100.0 35 .................................... ATTGTCTCGTATTGATTATCGGTTGCGTTGCTTGC 27622 36 100.0 38 .................................... CAAACAAAACCTCAAACACCTGAAAACCATCTGCGGTG 27548 36 100.0 39 .................................... TGGAGAGGTTCACGTACTGGCAGATGCAGGAATGCTACA 27473 36 100.0 35 .................................... TAATGTCCTGCCATCCGTGTGCGCACCATACGCGC 27402 36 100.0 34 .................................... GTAATCGGTGACAATGAAGAACATCACTGCGATG 27332 36 100.0 36 .................................... GTATGCGATAGTGGCATAACCGTAGTACAACAGATT 27260 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 7 36 100.0 36 TCCTCAATGAAGTCCTGAGCTTGAATGCTCAGGAAT # Left flank : CTTGAATGCTCAGGAATGCGACGACCCGCAACATGGCGGGCCACGTTGGAAA # Right flank : AGTCATAGTCTAAGACCTTGCAATGACACATATTCTAAAGGCTTTTGCGAGCGACTCTTTCATTTCTATCGCAATACAGAAGCAATATAAGTTCACTGGCTCCAAAACAACTATTTTTCAAGTGCGAGCGCTCACCGTGTGTCGCAGCAATGATGCATCTCTCGCACTTGAAAAACAGCAAAACACTCTTTACTTATCAAACAACATCACCATTAGGCTAAAACTTCAAATCACTGTCGGTATCTCTAAATCGACGTATCCACGGCGCCCCAAGAAATCCAAGCCCTCTTCCGTTTGAGAAATGGTTCCAAGAGAACAGAACACAACAGAATCGATTGAGTCATCTATTTCCCTCTCTATCTGCATACGGACATCCAACATCATCGAAGGACGTACCCGCAGTAAGAAGACGCTATATTGCAATCGCTCTCCATAGTGTTGAAGAATTTTCGCAACATGTGAGCGGCAGCAATCATCGCTGATATCATATGCCACCAGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCTCAATGAAGTCCTGAGCTTGAATGCTCAGGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 175860-176325 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHQ01000004.1 Bifidobacterium adolescentis strain 150 contig004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 175860 36 88.9 35 ...........A...C...T......A......... CTTTGGTTCGGCACTTCGCTTGGCATGTCGCCGGG 175931 36 97.2 35 .............T...................... GTCCGAAGCGCGTCGTCCGGATAGTCGTGGTTCGG 176002 36 100.0 36 .................................... CGCGGTGTCGATGCCGCACTGCCAGTTCGAGATGTC 176074 36 100.0 36 .................................... GCGTGATTTCGTTCTGGAAACGAATGGCAATTTCCG 176146 36 100.0 36 .................................... CAGCGATGGCGAGGTGGATCATTGCCGGTCCTCCAA 176218 36 100.0 36 .................................... CACATTCATTCGTCCGTATGCACTTCGTATGCAGTC 176290 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 7 36 98.0 36 TCCTCAATGAAGTCCTGAGCTTGAATGCTCAGGAAT # Left flank : GACAGTCTCGATGGATGCGCCGGTCTCGAAGACACGGATTCTTTTGATGAATGGATCGATTTCGATAATCGATTGAAAAAGAAATACGGCGAAGGCTATGTGCCGTCGAAAGTATTTTTAGCTATTCGGAAGGCGGATGACAAGCTCGTCGGCATCATTGATTTCAGACGTCCGCTATCCCCTTTTCTGCTGCAATACGGAGGAAATATTGGGTATAGCATTTTGCCATCGGAACGTCAAAAAGGGTATGCCAAAGCGATGCTCGCCTTACTCCTGCCCATCTGCAAAGAGCAGGGCGAGCAACGTGTTCTACTTACCTGTCACAAGAGCAATGAAGCATCAAGACGGACGATTATCAGCAATGGTGGAAAGATGGAGAATGAAATCGTGAACGGTACGGGACGGAACGAAGACAGTATCATCCAGCGATTTTGGATAGACCTCTGAATATTGACTTTAATCCAAAAAACTGGAGACGGTTGCGCTTCTTCACTCACAGC # Right flank : T # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCTCAATGAAGTCCTGAGCTTGAATGCTCAGGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 242-61 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHQ01000033.1 Bifidobacterium adolescentis strain 150 contig033, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 241 36 100.0 36 .................................... GATGCCTTCGGGTATGGACTCGGGTATCTCGCCCGT 169 36 100.0 37 .................................... GGCCTCTCGCACGTCCGCGACGGAGTGCCCGGTTTCC 96 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 3 36 100.0 37 TCCTCAATGAAGTCCTGAGCTTGAATGCTCAGGAAT # Left flank : CGCATAGTTTTTCCACGTCAGTTCTGGGAACATGGTT # Right flank : TCGCACCTGCCGCAGCTTGGCGGCGTCAATCCGCGGACTCCTCAATGAAGTCCTGAGCTTG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCTCAATGAAGTCCTGAGCTTGAATGCTCAGGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //