Array 1 247854-246430 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRBV01000003.1 Nitrosospira sp. Nsp11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 247853 36 100.0 30 .................................... GGACTAACGGGCAATAAAAAAGCCACCTCA 247787 36 100.0 30 .................................... GTCTATCGCGCCCTTGTTATCATTCGCCGC 247721 36 100.0 30 .................................... TAGTGTCGAGAAGTACCCCCCAAAGAAACC 247655 36 100.0 30 .................................... TACCGTCAACCGTGCCACAGTGCGGACAAG 247589 36 100.0 30 .................................... TCTACGTGCGAGGGAGCGCGGTGTCCAAGC 247523 36 100.0 31 .................................... TTGATGAGCTGCTGTGCCGCAGCGAGGTCTA 247456 36 100.0 30 .................................... TGTGGCGAAGTCCAGGGCATCCCATACCAA 247390 36 100.0 30 .................................... CACTGAGTCTGATTTGTTTTCGGAATGCCT 247324 36 100.0 30 .................................... AGACCCACCATATCTGCATTCGACGCGAGT 247258 36 100.0 30 .................................... TCGTTGAAGTTCACCGTGAAGGCCCGCCCG 247192 36 100.0 30 .................................... AGGCGGTACTGTCGCCTACTCAAATATGAA 247126 36 100.0 31 .................................... CCCAGAGTGGCAATGTCGCGCATTGCCTCGC 247059 36 100.0 30 .................................... GTGAATATCAACTGGGATAACGGCGCCAAC 246993 36 100.0 30 .................................... GCATTGCACGGTACGTCTCATCGTCCAGGC 246927 36 100.0 30 .................................... TTCCACGGTTCGCCCAATAACTCTATACGT 246861 36 100.0 30 .................................... TGGATAATTTAGCCATCTCGATCCTGTTAC 246795 36 100.0 30 .................................... CGGCGTGCGTATCCACTCCGGCAATACGGC 246729 36 100.0 30 .................................... TATCCTGCTTTACGCGGGCGAATTCCTTGT 246663 36 100.0 30 .................................... CCACGTAGGTGATGATCGTGGCATTGCTCG 246597 36 100.0 30 .................................... CAACGCCTTCAGGAGTCGAAACGCTGTATT 246531 36 100.0 30 .................................... GTACTCCGCGTACTCGAGCGCGAGTTTTAC 246465 36 94.4 0 ..................................CG | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 99.7 30 AGTTTAGCAGATTGGGATTTGCGCTCTGGCCGGAAC # Left flank : TCTCATTGGCGCAAATCTTTATGGGTGGAAAAGAGAAGCTCGATCTGCCATTGCCGGGCTTGCCTCTTACCCTGGCCGCAGCGCTATCAAATGACTGATATCTCATGCTTTCAGGATATCGCCTCATGTGGATTATGGTAATGTTTGATTTACCAGTGGTCGAAAAAACTGAGCGCAAGGCTGCGACCGAGTTTCGTAATGCCCTACTTGACATGGGTTTTGAGATGTCTCAATTTTCTGTTTATATGCGCTTTTGCAGCAGTCAAAGCCAGATAGATACCTACTGCACACAGGTAGAAAGGAATTTACCCGCTGGTGGAAAGGTGAATATCCTACAATTTACCGACAAACAGTATGAACGCATCATCGCTTTTCGCGGAAAAACCAAACAACTCTGCAAAAAAGCCCCGGATCAGTACGATCTTTTTTGATGAAAATCCCGCTTTCTTATTCTCATAAATGCGTTAACCCCCTGAACATCAGGGGGTTAACGCGCAGCT # Right flank : TACGGTCTGCGGTAGTGCAGCAAAGGTCTTGAGCAGGCATTTGGGTATTTTGGTGGCGTTCCCGAGCATGTCTTGTTTGATAACGCTGGAACGATTGTCGTTGAGCAGGACGCCTATCGATGGAGAAGGCAGGTTCTTGTAAACTGCTTCTTCGATATCGAAGAAGCAGTATTTGACATAGCTAGATCAGAGTGTTTTGAGGTACTCCAGCAATGCCTTTTTCTCGTCAGCCGAAAGTGTAGTGCCAAATTCATGGCCACAGCGGCTGTTGCCGGAATTTCGATCACTGCAATCCGTAGTCTCCAGCGTATAGTCGAACTTGGTTTGCTCAATGGCAAGGCCTACATTATCTGTATCGTAAGCCGGACCGATCTTGAAGGAACTCACCCGTTCAGCCGCCGGTTTCAGCAGCTCCGCCAGCGTGGGAACTGATCCATTGTGAAGATAGGGAGCAGCCGCCCAGATCCCCTCAAGGACGCGCGATTCATACGCGTAGGACG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAGCAGATTGGGATTTGCGCTCTGGCCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //