Array 1 55484-55962 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHVR01000011.1 Microcystis aeruginosa NIES-2522 contig_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 55484 36 97.2 39 ............C....................... GGCAACTAATAATACTCAATAAAACGCAGCAGTATTGTC 55559 36 100.0 42 .................................... CTAAAATTATAGGGTAAGGTCTAAGACGATTCTGTTACAAAT 55637 36 94.4 32 .......................CT........... GTAGGGTTAATTCATGAATTAACCCTACAAAT 55705 36 100.0 37 .................................... GTTCATTAAGAAAAAACACAAACATATTAGGAGTACA 55778 36 97.2 37 ........................T........... GAAAAGCCTCTAAATACCGGTTCGCCCTCGACCTTAT 55851 36 83.3 39 C...........C............ATA..C..... GTCGGGCAGTTGAAAACTTGAAGTCGGGAGAATCCATTT 55926 36 83.3 0 ............C........C..T.A.TA...... | T [55946] ========== ====== ====== ====== ==================================== ========================================== ================== 7 36 93.6 38 GTTTCCATTCAATTAATTTCTAAGCGCGAGTAGAGA # Left flank : GACGGCCGCAAGGAGCCTAATACAGTTCAACTGTAACAAAACTCGCTCGTTTCTTACCTAGACCTTTGCCAGTCCGATAAGTGTCTTTCAGTAAACTGCCTCGACCCGCTGCGAGCGATTGTCTGATAGTTTCTTCCGCCAAATAATCCTAAAAGTGTCGCCCAGTAAGCATTTTACTATAGCTTTTTTCAGTCTGCTGAGGTACAAAATTTCTGGGTTTTAGGCAAAGGGGAAGAAAAATAGCTGTACCTCACTAGCTTAGGAAACGCCATATATAAGTACCTAAGCAAAATTAATTACACATCCAAATCGTCAGCAGTTACTCCGTCAGCTTTTTGCTGTGATCAGTAAACAGTGAACTAAAAACTCAAATCTGATCCCGTCTCCTGTCTCCTGTCTCCTGTCTCGACTGGGAAATTAATTTTGCACGACTACTTATTTAGGGTTTCCGGCAAAAAGTTTAAAGAAGATTTAATCGCACTGGTGGGAGTCGAGATTTT # Right flank : ATGGGGTTAATGTAACATTACTATAAATATCTTGTCAAGTTGCCATTCAATCATCCTATAAAGTCGCCTCAAAGGGCGAGGCTCTAAACCCAATTTTTCGGTAAATCAGCCATATAAACCGCCAAAATCTCCAGCCTGTGGTATGTCGAGGGATTTTACCGGATAAAGAGTTTGCATAGACAAAAAACTATCCAAATATAATAATCATAGAAAAAAATCTATATTAGCAGAAACTCAGACAGGATAAGCTTTTGAAGCATTTTACTAAAAATGTTTTAAATACCCTGTTATCTTTAAGGATTACTAGTGCATATTAAGTATAACGAGAAGATCAGTCAGCAACAAGTTGAGGCATTTGTGGCTCTGGGATACTGGCAAGCGAAAATCTGGGGATTACTACGAAATCCCGTCTTGAAAGCACTGCATAGCAACTCAGGACGGGGTGGCAACAGCTTTTGGAGAGATTTAGAAGTAATGAAGTTGTGGGGAAAACATAACCC # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATTTCTAAGCGCGAGTAGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 3183-3527 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHVR01000155.1 Microcystis aeruginosa NIES-2522 contig_155, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ============================================ ================== 3183 34 82.4 44 ...A.G.A....AT....T............... CCTAAAAAAGTAGGGCTAATTCATGAATTAGCCCTACCCTTATC AA,A,C [3190,3200,3203] 3265 34 100.0 39 .................................. ACGCAATCGCCTCGGGGTTCGTAATGACCGGAAACCCCA 3338 34 100.0 44 .................................. GCAATTCTACCCATTCTAACCAAGTGCCTTTGAAATTTTCGCAA 3416 34 97.1 44 ............A..................... ACTAAAAAAGTAGGGCTAATTCATGAATTAGCCCTACCCTTATC 3494 34 97.1 0 ...............................A.. | ========== ====== ====== ====== ================================== ============================================ ================== 5 34 95.3 43 CCTTACCTATTAGGTCAAATAGGATTAGTTGGAA # Left flank : TGGCTGTCATTGGCAATGGGGGGATAAAAGTTCTTTAATCAACGATAATAAAGTCAGAGATTTAACTCATGTTCATCCCTTTATCAAAGATGTTCGCACTATTGCTAAACAATGGATGTACTTACAAGAAAATATCCCCATAACTCCCGATAATAGTGCTAACTGGCGAGAAAGTTGGCATACTAAAAATGTCGAGGTTTGGGGAAGAATTGCCGAAGATAAAGATGATTCCCTAGCCATAAAATGGCTTCACAAAGCCTATCAAAAACTGGATAATTTAAGTATCTATAAAACCTCGGTGACAGGAAGTATCGATCAAGTTGGTCGTCTTTGGCATCGAATGTATCCCAAAAATAATCATCAATACTTAGAATTATTAACAATTTTTCCTGATGACTCTGATGATTGTGCTTATTTTCTAGGTTTTCTAGACGAGAATAATGGTCAAGAGGGAAAATTTCAAAAACTTTGGCCGAAATAATCCCGTTTATGGTTAAGTA # Right flank : AAACAGAAAAAGGGTTTCTTTTAGAAACCCTTTTTCTAATAAATTGTGTCAAATATATCTTGACAAAAATCGATAAAAATGCTATGACCCAACGGCAATCTTCGCTTTATTGCATGAGTAGAAAACGGGTTTCTTCGAGAAACCCGTTTTTTGCGATCGCCAGTCAAGAAAAAACCCGATAATTCAACCTATTCCCTGGGATCAAAATCCGGCAGCGTCCCCAACTTGCGAATGGTTACTTTAACATCCATAGACAAAAAGTCATCAGCATCACCAAACCAAGAACCAGAAAGAGGTATGATTTGACCGGGATGACGAGCGATCGCCACTCGAATTAAATCAAAGCCGGCGGTAATTTGATTAGTCGGATCATAATTACGCCAACCGGCCCCCGGTAGATAAACCTGTAACCAAGCATGGGTAGCACCAGAGCCAGTCATCCCCACTTCACCACCGTCGAGGGCAGCATCGTAGAGATAGCCACTGACAAAACGACAGGC # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTACCTATTAGGTCAAATAGGATTAGTTGGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 11193-8181 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHVR01000040.1 Microcystis aeruginosa NIES-2522 contig_40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================================================================================================================================================================== ================== 11192 35 100.0 35 ................................... ATGAAAGCCAGAAGCTCCATCAGACACCCGCGCTC 11122 35 100.0 40 ................................... CTTCGGGTTTACGCCCAAAGCGGCGGACTAGCACCAATGA 11047 35 100.0 39 ................................... ATTGCGTGATTAAACTCACACCGTGTTTGACTAGCTCGA 10973 35 100.0 36 ................................... CTATAAAGGGGATGCTTTCATCGTCTTCCCCTTTAT 10902 35 100.0 42 ................................... CTTTTGTGGTCAAACGACGCAATAGCTCTAGGATAATATCTT 10825 35 100.0 40 ................................... TTAATAGAGTTTGTCTTTTCACCGTTAACGATTAGCTCGG 10750 35 100.0 35 ................................... GTTCGCAGGCGAACAATCCAAAAACTAAAACCACT 10680 35 100.0 37 ................................... TTTTACCAACCCATTTTGGTTGGTTTAAAAAACACTC 10608 35 100.0 38 ................................... AACAACCAATTAAACATTTCTGTACTCCTGTATCTACT 10535 35 100.0 35 ................................... ACAAAGTGGTAAAAGGTAAACTTCATACAAACATC 10465 35 100.0 36 ................................... AATAGGCTATTTATCACAGCCTCCCACAGTCAGATT 10394 35 100.0 37 ................................... TTATCAAGATCTTGAGAGAAAGCCAGCTTTAGCTGGT 10322 35 100.0 38 ................................... GTTTGTCGGCTCGATGTTTTGCCTTGCTTTGAAACATT 10249 35 100.0 32 ................................... GAGCAGGAAAAACTGGTGGCGGAGGCGTTGGG 10182 35 100.0 35 ................................... TTTGTACCTTTCTGAATAGGCCTGTTCAACACAAT 10112 35 100.0 37 ................................... TACGTACTCTTTTGATATTGAGACCTGACTTAGGAGT 10040 35 100.0 35 ................................... TGCGGTTTCTTTTTGTTTCATTTTTTTCCATTTGC 9970 35 100.0 40 ................................... AATCGGTAGAAACTTGTTTGAAAGCATTGTGCCGCAAGTA 9895 35 100.0 34 ................................... TCACTCTTGATTGGCGAATAATAATCCGCTTCAA 9826 35 100.0 37 ................................... TCCACCCATAATCTCTAATGACATGTACCATCTCATT 9754 35 100.0 36 ................................... ATGCTTCTCAGGCTTTGTGTTTGGTTTGTTCTGGTC 9683 35 100.0 39 ................................... ACGCTCTAAATGGTGAAGACGGCACTAAGGATAGTTTGT 9609 35 100.0 36 ................................... TAATGTGACTCCTGATTTGGTTTTGAAGATTTGAAT 9538 35 100.0 36 ................................... GTTGAATAATCGCCGCATGGCATCATAAAGATCCTT 9467 35 100.0 39 ................................... CAAAGGATAGTTTGTACGACAGCAAAAGCTCCTTTGCTT 9393 35 100.0 35 ................................... ACAGCAGAAGCCACACAGCTGTTGGCGTTTTGGTG 9323 35 100.0 39 ................................... AGCCATAGAGTTAGATGGACGCACCCTATAAAAAGTGAG 9249 35 100.0 41 ................................... TAACATAATAGGTGACTATTAGGACCCCCCCCACCAACCGA 9173 35 100.0 36 ................................... TTGCTCAAGAGCCTTTATTCCTTGATTTAAGGAATC 9102 35 100.0 36 ................................... AGAGTAACCGACCCGTAGGGGTCAGGGAAAATATTC 9031 35 100.0 45 ................................... CCATGTTTAAAATTAAGGTATGGTGGACTATCAAAAAAATCAATT 8951 35 100.0 36 ................................... AAGCACTTTGATTCTTGGCTTCAAAAATCTCTCTTG 8880 35 100.0 41 ................................... CATCCAACGGAGTAGGGGCAATTCATGAATTGCCCCTACTG 8804 34 82.9 182 ...........................G-..TCTG CTGAAAAAGTAGGGGCGAAGCATTCGGGCAATAACCTATCGGTGAAACCGGAGATTTTCTATCCGAATGCTTCGCCCCTACAGGACACGGGCTGATGAAGACGCTAGGTTTTGAAGCACGATTCTCTCAAAATCTTGCACCTGTGGGAGCAAGAAAAGCCACAAAACCCTTACCATGCCTAC 8588 35 80.0 40 A...C..T..A.....C..CC.............. GTTTTTGCTAACCAATTGTTAGCTTTAGGAACCCTCCAGA C,C,C [8565,8574,8582] 8510 35 100.0 41 ................................... CATCCAACGGAGTAGGGGCAATTCATGAATTGCCCCTACTG 8434 34 82.9 182 ...........................G-..TCTG CTGAAAAAGTAGGGGCGAAGCATTCGGGCAATAACCTATCGGTGAAACCGGAGATTTTCTATCCGAATGCTTCGCCCCTACAGGACGCGGGCTGATGAAGACGCCAGGTTTTGAAGCACGATTCTCTCAAAATCTTGCACCTGTGGGAGCAAGAAAAGCCACAAAACCCTTACCATGCCTAC 8218 35 80.0 0 A...C..T..A.....C..CC.............. | C,C,C [8195,8204,8212] ========== ====== ====== ====== =================================== ====================================================================================================================================================================================== ================== 38 35 98.0 45 CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Left flank : TATCTGAAGAAAAATCGGAGTGCTGATGCGAACACCGAAAGGATGATGAGAGATCAACCCTGAGCAACAAATAGAGAGCTACCAGAGTCTGCTGCTATTAAGGTAAAGCAACTAAAATATCGGGAGCATCTCATTTATGCAAGTGAGTAATTATACTTGTCCTAACACTGTTTTCTAGCAAGGCTTTCAAAATAGCTTGACGTAAAGATTTAAGGGTTATAAAGGTGAGATGCTCCCGATCGCATAGGCATTAGCGTGGAACAAATTCTATTGTTTTATGCCGATGGAATGGGGGGGTTCTCAACATTTTTCGTGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCTTTGCCCAGCAAGGCTTTGAGCCTTATGACTGAGGTAACTATTGCGAATCATTATTAATAATGTCGATGCTTTTCAATATCCCACGAAAAATTGCTGTACAATCCTTATACAGCCTAGTTTTGCCAAGCTAGT # Right flank : GTTTTTGCTAACCAATTGTTAGCTTTAGGAACCCTCCAGACTTTTAACTTCTTAGCAAGTTTAATTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAAAACCCTTACCATGCCTACATTTCACATTTATTCAGCCAGCCCTAATTAATGGAAACGTTTTTGCTAACCAATTGTTAGCTTTAGGAACCCTCCAGACTTTTAACTTCTTAGCAAGTTTAATTTTTAAAAAATCTCTGAGTTGGTTGGCATCGGGCCAATTTACTGAATTTGCATAGGGTTTAATGAGTTTAATTGTTGAATAAATGTAGCGCGATCACGCTGGTTAACTCCAAAAATTGTTACTGTTTGATAAGGTTCCTGTTGTGGGGGAAAATTAGATTTAATTAACACATAAGAAGGTGTAGAAGCAGTTTCTCCTCGTTGGCTGA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.37, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //