Array 1 26756-27649 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRCR01000021.1 Caldanaerovirga acetigignens strain DSM 18802, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 26756 30 100.0 36 .............................. AGCGGAAGAACTGTTACAACTTGCCGAGGCTGGTGT 26822 30 100.0 35 .............................. CGTTGATTTGATTATTACTCACAAGGAGGGATAAG 26887 30 100.0 37 .............................. ATTTTACTGTGCAGGTAGAGGATAGCAACGTGCCGCC 26954 30 100.0 37 .............................. TCCGTTAACTTCCTTTGCCAAGCCTTATTTGCCGGAC 27021 30 100.0 36 .............................. CCTGCACGATTGGTTCAGGGTAGGAAACAATCGCCT 27087 30 100.0 36 .............................. TAAACTCTTGTATTTCTTTTTCGTCGTTGCTTTCGA 27153 30 100.0 36 .............................. TTCGTAGAGCTTGTTCAATATCTACAATCGGGACTC 27219 30 100.0 36 .............................. AAATCTGTTAAAATTAAAAAAAATGAAAGGTTCGTA 27285 30 100.0 37 .............................. TAACCTCGCCAAACTTTTCTGTAAACATAGTTTAAAG 27352 30 100.0 37 .............................. CGATAACGTCCTTTATTTTTCTTTCCAGGAGTGCCCG 27419 30 100.0 36 .............................. CAGGGTATTTCGACAAGACCGAACAGACTGATATAT 27485 30 100.0 38 .............................. TTTTTTGACACGCTTTTTTGCAACATGATAATATCCTC 27553 30 100.0 37 .............................. AACCACGTTCAATAGTAAGCAATTGTTTAACAACCGA 27620 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 100.0 37 GTTTTTAGCCTACCTATGAGGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACAAAAAA # Right flank : TTTTTATTGCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [15.0-16.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1-1291 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRCR01000018.1 Caldanaerovirga acetigignens strain DSM 18802, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1 29 96.7 36 -............................. AGTGGTATGCTGTATTTCCTGACGGAAGTGCCGTAT 66 30 100.0 36 .............................. TTTTCTCTGCTTTGCATATCGAATCGCCTCCTAATT 132 30 100.0 38 .............................. TTGATGACAGCATAAGCAACCAACTGACTGCTATTGCA 200 30 100.0 35 .............................. TCGAGTGGCAAGCAGACACCCCCAGCATTGGAATA 265 30 100.0 37 .............................. ATTGAAGGCAATGAAAGAATTGGGTTTATATTAAAAG 332 30 100.0 39 .............................. TTGGCTTGGCAACTTTTCTGCTATGGTGCAGCAGGTAGT 401 30 100.0 36 .............................. GCGTGAAGAAGAACATCGCCGCCGCATGGAACGAAT 467 30 100.0 36 .............................. ACGCCAAAAGCTTCGTGTAAACATCCAAATAGTTTT 533 30 100.0 37 .............................. ATTATAAATCATAACTTCACTTTCTCAGTTGCTTTTT 600 30 100.0 39 .............................. TGGGTATTGGACGGCACATTTGCGCTTGCACCTGACCCA 669 30 100.0 36 .............................. TAGATAAATGCTATGAAGCTAACAAAGATAACTACA 735 30 100.0 36 .............................. TTTCCCACCTTTCCACTCTTGCCAAGGTATTCAAAA 801 30 100.0 36 .............................. TGGCAAAGAATTGTGGCAAATTCCCAAAGAAGCAGC 867 30 100.0 37 .............................. ACGAGAGTATCGAAGTCATACATTTTCGGTTTCCTCC 934 30 100.0 35 .............................. GGTTTAAAATCCTCGCATTCTTCATGCTCTTTCCG 999 30 100.0 36 .............................. GGATGTAACGTCACTTTGAAAGGCTCATCTTCTGGA 1065 30 100.0 37 .............................. TAAACTCTTGTATTTCTTTTTCGTCGTTGCTTTCGAC 1132 30 100.0 35 .............................. CCATTACCCGCGGTATGGGCGAGGACATTATTCGA 1197 30 100.0 35 .............................. TGCCCCTTTCACCTCCCTTCCAAATCACATGTATT 1262 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 20 30 99.8 36 GTTTTTAGCCTACCTATGAGGGATTGAAAC # Left flank : | # Right flank : CTTATCTCGGCTACTCCTTTTACGCCGTCTTTTACATGTTTTTAGCCTACCTATGAGGGATTGAAACTTTACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 30441-29949 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRCR01000018.1 Caldanaerovirga acetigignens strain DSM 18802, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 30440 30 96.7 35 .................A............ CCATACCAGACGTGGCCGAGGAGCCATGCCGGCAA 30375 30 96.7 35 .................A............ CCGGTCTCCTTGTCCACATAGTCCGGGGTATATTC 30310 30 96.7 35 .................A............ TAATCCATATCAAAAGCGATAAGTACTTTCTTTAC 30245 30 96.7 36 .................A............ TCTATTACATTCAGAGGAACGCCCATATCGGTCAGT 30179 30 100.0 37 .............................. AGGCTAATCTGCACATCTTAAACCACCTCCGCATATT 30112 30 100.0 36 .............................. GCAGGATGCTTGCCGGGTCCAGGTTGACCCTGTCCA 30046 30 100.0 38 .............................. TACAGCCGTCCTGCGCATCCTTGTATATGTCCTTCACT 29978 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 98.3 36 GTTTTTAGCCTACCTATGAGGGATTGAAAC # Left flank : CAACTCCTTAGCGGCTTTAGTTTTGAAGGGCTGGTGCAACAACCATAAGGGGTTATTCTATCCTGCGTGCTTCCCTAAAAGGGAGCAACAATCTATGGTGCACCTGGTCGTTGTGGTCTGTCTACTTGTCGGGCTCGAGGCACCAAGGTAGTAGCGACCTGCCTTCACCAGCCGCGTACTGATTATATCATAAGGGCATTTTCATCTTCTGCTGGTGCCGCATTTGTTGCGGCATGGGGGTCTATAAGGGATTGAAACAGCATTTTTCGCAACGCCTCCATGTCAAAATTTTTA # Right flank : TCGTCACCAGCACATCGAGCACTCCGATAACTACCGACCGTTTTTAGCCTACCTATCCTGAAAATAATGTTCCGAAAAAAGGCAATAAAAAACTAAGCCCATATCCAACTGGAAAAATATGGGATAAAAAAATCTATATCGACGTAATGACAAAAACCTAAAAATCTAAGATGCTACCGTTTCGACCGTGACCTTCAAACCTAAAGATTCAAGCTTTTTCAAAGACTGCCGTATAACCATGTTGCGCCTTTTCTCTTCGTAATAATTGGGGCCCAGTTCAATATAAGGTTGCTTTCGCTTGAGAATATGGTAAACTATAGTCAGGATGCTGTGGGCCACCGCAACTGCTGCCCGGTTTGAACCTCTTCGGGCAGCGATGCGGTGGTATTGACTGGAAAGATAAGCTAAAAGGGCAAAGCTTGAAGCTTTGCCCTGTCGAATTATCCCACAAGTTTTTCCACTGGAACGTAATCTTCGTCATAGCCGAAATATTTTGGCCC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATGAGGGATTGAAAC # Alternate repeat : GTTTTTAGCCTACCTATAAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //