Array 1 117710-121208 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXYA01000010.1 Acetobacterium paludosum strain DSM 8237 NODE_10_length_167849_cov_44.2409, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 117710 33 100.0 34 ................................. AAATATAGAATCAAAAATAGCGAAGAAAATGACA 117777 33 100.0 33 ................................. TACTATAGTAGCATTATAAGCGGCTCCCATTGG 117843 33 100.0 32 ................................. TTCATTATTAGCGACTCTAACATGGGCCATAA 117908 33 100.0 36 ................................. CATTATAGGGATCTAATAAAGCCTGTACACTCTCAA 117977 33 100.0 34 ................................. TTCTATACTGGTCAACTAAAGGTTGGCAGGTCTT 118044 33 100.0 32 ................................. TTAGACTGCCCTATGTTGTTAGTTTATTCTAC 118109 33 100.0 33 ................................. CTCTAGGACAGTTTGGTACAGATACAGGAGTTA 118175 33 100.0 34 ................................. TACTTTGTTTAGTGCATCATCAATCAGCTTAACC 118242 33 100.0 34 ................................. TCACCTCATAATCTTTAAATATTGAATCATTAAA 118309 33 100.0 34 ................................. ATTTAGCAAGTATGGCATTAAAAGAATATGTAAA 118376 33 100.0 33 ................................. CAATCGGTGGTACAGCAATTGCATTATCATTAA 118442 33 100.0 34 ................................. GTGACATTACATAGGTTACTTATTGTTTGTTGTT 118509 33 100.0 33 ................................. TATAATAAAACTTTGGTTGCTCCACCATCGTTT 118575 33 100.0 34 ................................. ACCGCTGATACAATTCTGCTTGCTTCATCTCGTG 118642 33 100.0 33 ................................. TTAATGAGATATATCAACCACAAGGATTTGTCG 118708 33 100.0 33 ................................. TGCTCATGGTAGAAATATGAATATTGTTGTCAA 118774 33 100.0 33 ................................. ATCCCATGCCTGTTGAACTTCCCATTTCGTACT 118840 33 100.0 34 ................................. TAGTAGGAAGACCTAAAACAGAGGTGGAGGTGTC 118907 33 100.0 33 ................................. TAAAATAGGTTACTGTGTTGAATGCCACCAAAC 118973 33 100.0 34 ................................. TTTACCGCCATTTTGAAAGAAACCATACACTGAA 119040 33 100.0 33 ................................. TCTACACAAATAGTATATTATGGTTAAGTTTGT 119106 33 100.0 35 ................................. ATCAGAACAGTACTCTAACCTATTGAGTTACACCC 119174 33 100.0 33 ................................. TATTAAGACCTGCTACCCAATCATTGATGTTAT 119240 33 100.0 33 ................................. TACATATATCAATAAAATCACTAGGCTGTTCTC 119306 33 100.0 36 ................................. TAGTAGGAAGACCTAAAACAGAGATGGAGGTGTCAA 119375 33 100.0 33 ................................. TTATAACACAATAACCTAATTCCCCACATTTTC 119441 33 100.0 34 ................................. TGGTAGAGGTGTCCATGTAAATGATTGTGTATCT 119508 33 100.0 34 ................................. TTATAGTAAGAAACTCTTCTTCTATTTGATAGGT 119575 33 100.0 34 ................................. ATTCCTAAAGACTCCATTACCTCACGTTCGTTTT 119642 33 100.0 34 ................................. TAATACTAACCTTGATGAATACAGAAAGATTGTA 119709 33 100.0 33 ................................. TATTGTAAAAACTCTTTCTGCCATCATATTCAC 119775 33 100.0 34 ................................. CATAGTTTTACCTCTCATTATAAAATTTTTGCCT 119842 33 100.0 34 ................................. CATCGAGCCTTTTTTCAGTTTTCGTAACGGCGTC 119909 33 100.0 32 ................................. TCCGCGAAACTCATTATTAATACCTCCTAGTT 119974 33 100.0 34 ................................. AACATATAACAATAGCGCTTGCATTTCAGTTAAT 120041 33 100.0 33 ................................. GTGTGACTGAGGTTTTGGTATCAACTGTAGCCC 120107 33 100.0 34 ................................. TTTCATCCCCAAAATTACCTGATGGTATAATAAG 120174 33 100.0 33 ................................. CTGACAGTAATTCAATGAGAACAATTCCTGCAT 120240 33 100.0 33 ................................. TCACCTGTTGTACCAGCTGTTACACCATTACTA 120306 33 100.0 33 ................................. AAAAAGCCTACATCTAAATCATAGTTAGAATAC 120372 33 100.0 34 ................................. TCATCTAAGTGGGAAGAGTCATTTACATTAGTAG 120439 33 100.0 34 ................................. TCTTCCCACGTTTTACCTTCCCCCTCCATTGTAG 120506 33 100.0 34 ................................. TATCAAAATCTGCCATCGGAGTAATAACGCCATC 120573 33 100.0 33 ................................. GTTGATGTTTAACGCCTTTCGTGATGCAGCAAT 120639 33 100.0 35 ................................. TATGGGTAACCCTGCTTTCTTGCAGGCCTTGTATA 120707 33 100.0 33 ................................. ACGAAAACAAGACGGCGATGAATTTTATACTGA 120773 33 100.0 34 ................................. TACATAAATTTCTTATGGGACATAATATTTTTGG 120840 33 100.0 34 ................................. AAAAAATTCAGTATCATGCAAGGCGATCTCCCCG 120907 33 100.0 34 ................................. AGCTCTTATTGGCTCTCCCGTCCATCTGATTTCG 120974 33 100.0 34 ................................. CTGCCGATTTATAGGCAATATTACAGGGTTGATC 121041 33 100.0 35 ................................. ACGAAATTTGGATATTTTTCAAGCAAATCCTCTAA 121109 33 100.0 34 ................................. CTAACTCTTCGATCACCTTATCCAGTACCGCCAG 121176 33 97.0 0 ................................T | ========== ====== ====== ====== ================================= ==================================== ================== 53 33 99.9 34 GTCGCGCTCCGCATGGGGCGTGTGGATTGAAAC # Left flank : GTGAAGAGTTACCGGAGTATTGTCCGTTTTTAATGAGATGAGGTGGTTTTATGTATGTTATAATCGGCTATGATGTGAGTACGATGTCGGCTGAAGGAAGAAAACGACTAAGAAAAGTCAGTAAAGCTTGTCAAAATTATGGACAACGAGTTCAAAATTCACTTTTTGAATGCTGTATTGATTATGGTACATTTTTAAAATTGAAAAATGAATTAGAAAAAATAATAAATAAAGAAACAGACAGTTTGAGATATTATTATTTAGGTAATAATTGGGAAAAAAAAGTGGAACATGTGGGTGCGAAACCATCATTCAATCCACAAGATATTTTAATAATCTAGTGGTGTTTTGCGAACCCCAAGCTAACATTGTTTTCTATTCTATAGAAAGCTGGATATAATCAGATTCTTAAAAATAAAAACTAAAAATAAACAAAAAACTAGTCCGCCTCAAAAAGTCGTGAAACGGCATAGATACAGCATTTTTTATCTAATTGCAGA # Right flank : TTTCTTGTCTTTATACTATAGAAACAACTCGCATAATCTCCGTGAATAATATTTCGCAAATTTATAAAAAAAATATAGATATGAGGAGAAAACTGATAGCACTATTGTCGCTAGAATTTGATTTTTTCACTTTGTCAAAACTCCGATTTGCTGTTCTTTAATTGCTATTATTCTTGACAACTTTAAAATTAAAGAATAAAATGGCTCTACAAGTAAACCATTACAATAGAATAACACAGGGCAAGAGTTTAAGAGATGTTCGTATAATACTGCCGTTACGCCGGACCGGAATTTTCGGGATTGCGCCCTTTGTATGATGCGGACTTTTTTCATGTCAAAGAAAGGAAAAATTTTGAAAAAGAAAAATTCTGGTAAAGAAGACTTTCAAAAACTACTAAAATCCCACCCGGTTATTCCATCGGTCCATCAGAGAAAAGAATTGCTTTATGCGATGGAAGAAACGAGTGTTGGCTGGATTATGTTGAAATTAGGGGATGTCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCGCATGGGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCGCGCATGCGGCGTGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //