Array 1 25948-27288 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVSQ01000093.1 Streptococcus salivarius strain 140_SSAL 1297_81393_896503_657_,...,52+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 25948 36 100.0 36 .................................... AGGTATTATACTTGCTAATATAAAGTTCAGCAGTGT 26020 36 100.0 36 .................................... CGCTAGTACAAACTCACTAATCAAAAACGGATACTA 26092 36 97.2 33 .............C...................... CAAGTCAGTTGTTTTAGTTGTGTTTGTCATTTT 26161 36 94.4 37 .............C..........A........... TGGGTGATTGTCAAGCTATCCTTAGTTTGTAAAATCA 26234 36 77.8 35 .......C...T.TA......CA.A..........T AAATAAAGCCCCAAATCATACTTACCTTGTTTAAG 26305 36 83.3 38 .......C.....GA......G..........T..G GAATTGTTTTTCCATAAAACAGAACATGGGTTCGAGAA G [26329] 26380 36 72.2 38 A.G.....AT....AG.....CA.......A.T... ACCCAACTAGCGAAATCATAGTTTTGTGGTTTGTTCAG 26454 36 97.2 36 .............T...................... TCGATTGGCTCGGTATATTCCGGCAATTCTCGCACC 26526 36 91.7 38 .............C........A.........T... AAACCTAATATAATGTTTAGGCAAAAATAACTACCTCT 26600 36 91.7 38 .G...........GA..................... TTATATGATTCCAAAATGTAATATGCTGCTATGGAATT 26674 36 100.0 35 .................................... AAGTACTCAAGATACCCTAGCTTATAGTTAAGTTT 26745 36 100.0 37 .................................... TCCCTAGCCTCACGTGCATGGAATTTGAATTCGATGC 26818 36 91.7 38 ..........C..C..................T... GGAGTCGAGATCACAACATCACTTGGCTTAGTGTGATC 26892 36 91.7 37 .............TC......C.............. TCAAAGGTTGCGGTTCATCCGCTTCAGGTAGAGGTGC 26965 36 86.1 36 .C...........T.C....A...........T... CGATATTTAAGTATGATGCGATCTACTTCATCGTCC 27037 36 91.7 35 .......C.....C..................T... TCATGTTATAATCTCCTTGGATGTTATTTCTAGCG 27108 36 91.7 37 .......C.....C.......C.............. TTTACTAGGACTGATCATATAATTCATTTCATCGTAA 27181 36 97.2 36 .....................G.............. ACATAGATTTTTTTAGTCATTGTTTTTCTCCTTTTT 27253 36 77.8 0 .............T.....G..........TTTTTT | ========== ====== ====== ====== ==================================== ====================================== ================== 19 36 91.2 36 GATATAAACCTATATACCTCGAGAGGGGACGGAAAC # Left flank : AGAGTTTGATTAGGGCTTTTAGAGAACTTGACCCTAGTCTGTATGAGACAAGTTACACAGGAGGGCATTAATGGGACTTTACTTTAATCTCAGCGAAGAAGAGCGTGAGTTTGCCAAACAAAAAACCATGTTTTGTCTGATTATTTATGATATCCGAAGTAACAAACGTAGACTTAAACTCTCCAAGTTACTTGAAGGTTATGGCGTGAGGGTGCAAAAATCATGTTTCGAGGTCGACCTGTCAAGAAATGACTATCAGTCTCTCCTTAAGGATATCGAGAGCTTCTACAAGGCCGATGAAGAAGACAGCATAATCGTGTATGTGACAACCAAAGAAGAGGTGACTAGTTTTAGCCCCTACCATAGTGCCGAAAAATTAGATGACATTCTCTTCTTCTAAGCCTTTATAGGCCTTCAATCATATGGTACAATATAGATAGTGTTTCCAGTAGGTCCTATATCTTGTGCCTCTAGCAACTGTCTAGAGCACAAGATATGGG # Right flank : TGAAAATTTTGAAAATAGTCTTGACACCGCTTCCAGAAAGTGTTAGACTAAAAGCACATTAAGGGCGCCCCAATGAGGTGAAAAGTACTTTCAGCTTTTGGGGTTTTTTCATACAAAGATGAAGGAGTCGAATGAAAAAATTAGTATTTACTTTTAAAAGGATTGACCATCCTGCACAAGATTTGGCTGTTAAATTTCATGGCTTCTTGATGGAGCAGTTGGATAGTGACTATGTTGATTATCTGCATCAGCAGCAAACAAATCCCTATGCGACTAAGGTAATCCAAGGGAAAGATGACACGCAGTGGGTTGTGCATCTGCTCACAGATGACCTCGAGGATAAAGTTTTTATGACCTTATTACAGATTAAAGAAGTGTCCTTAAACGACTTGCCTAAACTCAGTGTCGAAAAAGTTGAGATTCTGGAGTTGGGAGCGGATAAACTGTTAGAGATTTTCAATAGTGAGGACAATCAAACCTATTTTTCAATCATTTTTGAG # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAAACCTATATACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [18-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //