Array 1 6080-5915 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRAZ010000059.1 Clostridium bowmanii strain DSM 14206 CBC_59, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 6079 32 100.0 35 ................................ TCTTTGCTTGTTTTCAAATCTTATGCCTATAAAGT 6012 32 96.9 34 ...............T................ CTCTTGTACGCATAAGAAAAAGTAAAATGCTTTT 5946 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 99.0 35 GTCGCACCCTTTAGGGGTGTGTGGATTGAAAT # Left flank : TTGAATATCTCTTCCGAATGCTTCCCAATAGTAATTTTGCATCAAATTCTTCTGTGCTTGATGAATATTTGCCATGGTCAGATAAGGTACAGCTTGAATGCAGAATAAATACAACAGAAACAGAAACAGGTAAAAAGGAGGGAATTTGCAGTGAGTCAGCCTAATATTAACTACATGATGAACATGACTAAAGAGTTTCTTAGTGGCAAAATTGATGATATAGCATATACTCTTGATTTCCCATATGAGCTAGAACATCGATACAAACAAATGCATCGAGAAGATGATGATTATTGTGAATTAATATATGAATGTCTTTATGAAGAAGGCATTGCTATATATAATGAGATATCAGATCCTGAATTTAAGAAACTTATTCGAAAACAATATAATTACATAATGAAAATTGCAAAAGAAGGATTTTATTAAAAAAACAGTTTCACAGGTTAATGCGGAGCTGTTTTTTTAGGTAACGGTATGTGTTCCATCGCTTACAATAG # Right flank : ATTTACACAGGGAGCATCTATAAATAGGTCCAAGCCAATCACCAAATGTTTGATTTTTAGATTATTTAAAGGTTTCGTTACCTAACAAGGTTATAAAGCAAGCTAGTGAATAATCCATTACTAGGGAACCTGTCATCTGGTGGTTTTTAAGTTATTGTTTAATAACAAATAGTGCGCAACTTTAAGTAGAAGGGCATATTAACTAATCTTGCTGATAATAGAGAATATTCATATTTGTACTGGGAAGGGGTTTCTAATAATAAATGGGATATGTCAAAGTGATTTGTAGTTAAAGGTGATGGATTTTAAGCCCTTAAATAGTGAAATGAAAATAGAAGAACAAAAGCTAAAACCATTCATAAAAAGTGGATTTACGGTCGTTGAATGGGGTGGAACTGAATTAAAGTAAAAAATCGATGAAATAGGATTTTAATGATATAATAAAATTATATTTATTTAAGAGTCAAGGCAGAAGGAGAAAAATTAAGAAATGATAAAAA # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTTAGGGGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.20,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : NA // Array 1 7980-273 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRAZ010000037.1 Clostridium bowmanii strain DSM 14206 CBC_37, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 7979 30 100.0 36 .............................. TTGAAGGAGATAATGATCCAGATTATGAAACTGAAA 7913 30 100.0 37 .............................. TGAAGTGACCTCTTCTATCGCAGGAAATAGCTTCTTG 7846 30 100.0 36 .............................. AGGAAATATGGTTATCTAAAGACATGACTATAATGG 7780 30 100.0 35 .............................. TACTCACAAAATAACTCACAACACATCAAACCTTT 7715 30 100.0 36 .............................. TTATTACACCCCATTTCACAGGACATTTGAAATATA 7649 30 100.0 37 .............................. TGTCCTAATTCTTCGGATACGGGGATATCGTGTACGG 7582 30 100.0 36 .............................. TTTCTTTAAGATGTTTCATATCACCGCCAGCATCTA 7516 30 100.0 36 .............................. AGAGCTGAACAAATGAAATTCGATACCATGCCTTTA 7450 30 100.0 36 .............................. TTAAAAGATATTAAAACAACAGATAGATTATCGACT 7384 30 100.0 36 .............................. GTAGATGATGGGGATATTCCATTTTAAGGTAATTTA 7318 30 100.0 36 .............................. TAATCTATAAGTGATATTAATATTGGTTCTGTATTG 7252 30 100.0 37 .............................. TCTAGATCATTCTTAATATCCTTAACAGCTTGTAATT 7185 30 100.0 36 .............................. TTACTATGTAGTGCATTGTTAAACAGTAATAATATA 7119 30 100.0 36 .............................. CCAGGTAATACTGATGTAATACATTTTGAAACAGAT 7053 30 100.0 37 .............................. GATACAATGGATATATCAAACTCAATAGATAATACTG 6986 30 100.0 37 .............................. TTGCTCTGAACAGCAGACCTATCAAATTTCTAGTGAA 6919 30 100.0 37 .............................. TGTTGAGTTGCTCCAGTGTTTAAAGAATTTACTTTAG 6852 30 100.0 35 .............................. CCTAGTGGCGGTGGTAAGCTATATGAACAAATTAA 6787 30 100.0 37 .............................. ACAGAAATTGAATTGTTAAAAGAAGAAAATGAAGCAC 6720 30 100.0 37 .............................. AGTAGTTGAGTTAACAATGCTAAAAGTGTACTCATTA 6653 30 100.0 37 .............................. ATTTAATTCACAGAATATAGAGGGTACAGAGGAACTA 6586 30 100.0 37 .............................. TAAAATAGCTTTGCCATAGTCAATATAACTGATTCTA 6519 30 100.0 36 .............................. ATAGGGAATTAGAGTTAATGGCCAGTGCATGGGGTA 6453 30 100.0 37 .............................. ATAATAATATCTATATATTACTCATAAAAATAAACTA 6386 30 100.0 35 .............................. TGTTGATAACCCCAATGTCTATATTTTTTATTGTA 6321 30 100.0 36 .............................. TTCTGAACTAAAATCTATTAAATTCATTTTTATATG 6255 30 100.0 36 .............................. CATTGATTAAGTGTATATTCTAAGTAAAATTTATTC 6189 30 100.0 36 .............................. TTTAGTGTGCTTTGTCTATTACTAAAAACATATATG 6123 30 100.0 36 .............................. ACTTTTAATCCTGCTGTTTCAAGTTCATCGTATATT 6057 30 100.0 37 .............................. GTATTATAGTAGTTACGTAGCTATTGTATGAGCTGAA 5990 30 100.0 37 .............................. CTGCATATGCTTCTATTCTAGTCTTCGCGCGTAAAAT 5923 30 100.0 36 .............................. ATATGGAAGTTATAACAATATAAAGGGAGTGTAATA 5857 30 100.0 36 .............................. CAATGTTGTCAAGGTGTTACAGATGTAATGAGAGGT 5791 30 100.0 36 .............................. ACAGTGGCTAAGATACAAGCACTAGCAAAGGCTGGA 5725 30 100.0 37 .............................. ACAGTAACTACTATATGTTTAACGTGGGTCTGATATA 5658 30 100.0 36 .............................. GGCGGTGATGGTGCTAGTGTATCATGTGTCACTATA 5592 30 100.0 37 .............................. TGATATGCGCCCCCTGTTTATAATATAATATCATAGT 5525 30 100.0 36 .............................. AAAGCACTAAAAATAAAAGCAAAAGGATTCGCATAC 5459 30 100.0 35 .............................. ACTATATCACTAACAAATAATAGTCAGGCATTACA 5394 30 100.0 36 .............................. CCGGGTAACAGAATTTAAAAAAATGTGACTGAACAG 5328 30 100.0 36 .............................. TACAACGTCTTAGATGACACATATAAGCTACATACA 5262 30 100.0 36 .............................. TGAGTTCTTTTACATTAAAACTTGATAAATCTACCT 5196 30 100.0 36 .............................. AATTTATGGTCCTTATTCTCAATTAGAGGTCTGTTT 5130 30 100.0 36 .............................. GCCAGTTGGCAACGAAAGAATTAATTCTAAGGGTTA 5064 30 100.0 36 .............................. GGGCTTCCACTCAAGGCTGATGGGTATGAATGTAAT 4998 30 100.0 37 .............................. ACGTGAGTATAAACGCAATAGTATTTTAAATGTTTAT 4931 30 100.0 37 .............................. TGGAGAAACAACTTGAAATTGAAAAAGAAAATTTAAT 4864 30 100.0 36 .............................. GTGCCAACAGGACAAAAAGGAATTGACAAAGAATCT 4798 30 100.0 37 .............................. TATTATCAGTCATAATATAATCGGCTATATTCTTTTG 4731 30 100.0 36 .............................. TGTAGACGATATAGGGAGGTTTAAGATGGAGTTAAA 4665 30 100.0 36 .............................. AACAGTCCGTCTAATGACCTCTTAGTGCCTAGTTTG 4599 30 100.0 36 .............................. TGCGGATGTTCCTCCAAATGTACCACAAGTATTATA 4533 30 100.0 37 .............................. TTGAATTGTTTGTATGCTATCATATGTGATTGATACT 4466 30 100.0 36 .............................. TTAACGTAGCACAATATTGATAGAATTGATTTGAAA 4400 30 100.0 37 .............................. TATATAAACACTGTTATAAACTCAAATGTAAACACAG 4333 30 100.0 35 .............................. TGAGTTCTTTTACATTAAAGCCGGATAAATCTACC 4268 30 100.0 36 .............................. ACGTTAACACTGATGTGGAGTGAACACACAATAGTA 4202 30 100.0 36 .............................. TAATACTACTACGACTACAACTACTATTAAGATTAT 4136 30 100.0 37 .............................. AAATTTCACGACATTTATAGTTTAATCCTTTAACATT 4069 30 100.0 37 .............................. ATGAGAATGTAGAAACTAAATACACAAAAAGTGGAGG 4002 30 100.0 36 .............................. TAAAGTATACCATATTACTATATTACCATATTGCTA 3936 30 100.0 37 .............................. GCTTTAAACACTTTTGCATTGTGAAGCACATTAGATC 3869 30 100.0 37 .............................. TTTGACTTTATAGTATATGAGGACAAAGAGAAAACTA 3802 30 100.0 36 .............................. TGATGTTTACTTAATAGAAAACTTTATAACTATAAA 3736 30 100.0 36 .............................. ATGCAAGTTGAACAAGCCTACGAAAAGAAGTATCAA 3670 30 100.0 36 .............................. ATTGATTCAAATGTGTCTCTCTCGCCCTGTATTGCA 3604 30 100.0 36 .............................. TGATTTATGTTATAATAATATCAAACGGGGGCGGTC 3538 30 100.0 37 .............................. GACTAGAAATAATATAGATATTGACTATACATTAACA 3471 30 100.0 36 .............................. CGTGTAGAAAATATTCTTAACGGTATAGGAGAATTA 3405 30 100.0 36 .............................. AAAAACTTTTACCATGCTATAATGGCCCTCAAACAT 3339 30 100.0 36 .............................. GCCTATTGACTTAATTGAAGTAATGGAAATATTAAA 3273 30 100.0 36 .............................. TTCATTAAAAATATTGTAGTTACTGTCTTTGATGCA 3207 30 100.0 36 .............................. TATAAACATAATAAGGCATTTTAATGGATAAAAAAG 3141 30 100.0 35 .............................. TGAGCCTGTACCTCCACATAAATCAAGTATTATTT 3076 30 96.7 36 ..............G............... CTCCTTTTCATTAATTTGTTCGCATTCTCTAATCGC 3010 30 100.0 36 .............................. CCGAAACTAGCAATTTCACCAAGTGTAAACAATAAA 2944 30 100.0 37 .............................. CAAAAAATAATAAAGATGGTTAATTGTTCAAGTGATG 2877 30 100.0 36 .............................. TAAATTTAAAATTTACTTTGAAGAACTTCAAAATGT 2811 30 100.0 36 .............................. GGGAAATGTACTTTTAAGGAATTTGAAGCAACAAGT 2745 30 100.0 36 .............................. TGTTAACTATTGCAAAGCTGAATGTAATAAAGAGTG 2679 30 100.0 36 .............................. ACTGGATGGACTTCGATTGATGGGGAAAAAGCAGAT 2613 30 100.0 35 .............................. TTTAGATATGGTTAAAGGTAAAGTAAAACAAGTTG 2548 30 100.0 36 .............................. CCAGAACTTATCTTTTTCCATACATAACGTTTTACA 2482 30 100.0 36 .............................. TAAGCTAACCGAGCATTAAACTCTGTTTTTGTTAAA 2416 30 100.0 35 .............................. CATACTCTTGGTAATATTCTAATATTAGATTTTTC 2351 30 100.0 37 .............................. TCAGGCACAAATGACCTCACATGGATTGATACTTGTT 2284 30 100.0 37 .............................. ACTTACGTAATGATAACTTATTCTTTAACCTCAACTC 2217 30 100.0 36 .............................. CAATCTGCCCAATATCTAATTAAAGATTCTGTATTA 2151 30 100.0 36 .............................. GTTGATAGTGATTTTGTAGGTGTTAAAATTTTAAGA 2085 30 100.0 36 .............................. TACATATAAATACTTACTTACTTTAATATACATAGT 2019 30 100.0 36 .............................. CTTCCCATGATCCCATTACTTGTAAATTTTCATCTA 1953 30 96.7 36 ........T..................... TGGCTTAATACGTCTGTAATTACAGCTTTTTCAAGG 1887 30 100.0 36 .............................. ACTAAATATATCATTACAATTATACTAACATACTAT 1821 30 100.0 36 .............................. ATATAATGCATTATTCAGAGCCTTATCTAATACTTT 1755 30 100.0 36 .............................. ATATGTAAAATAATTTATCGTCTTGAGTGTAACATG 1689 30 100.0 36 .............................. TTGGAAGTTCAAGACAAAATAAAACAAACGTTAAAA 1623 30 100.0 35 .............................. TTAATTATGTATCATTATTTGTGGTCAGCTAATCC 1558 30 100.0 36 .............................. TAGAATATTGATATAAATTACTATTATCTAACATTT 1492 30 100.0 36 .............................. CAAGAACAGAACTCTAAAAATAACTCCAGAGGTTGG 1426 30 100.0 36 .............................. ACTAAATATATCATTACAATTATACTAACATACTAT 1360 30 100.0 36 .............................. TCAAATATATTATGTATTGCTTAACTTTTTAATTTA 1294 30 100.0 35 .............................. TAAGTTATAACTTTAATTTATTAAGGTATACAGGA 1229 30 100.0 36 .............................. AAGATCCAGACGTCGCAACCTAACAAAGAAAGTAAA 1163 30 100.0 37 .............................. CAAATAAAAGATAATATAATTGGTTATCATGGAACTA 1096 30 100.0 36 .............................. TTCTAAACTTAAAAGATTTACAAGCAGCCTATAACG 1030 30 100.0 37 .............................. TAGAGCCTGTAGACTCAACCTCTGACTTCTCTTTCCA 963 30 100.0 37 .............................. ATTTCTTCATTTAATTTAGTTGAACTTAAAACATCTG 896 30 100.0 36 .............................. CTACATTCCCTGTATCTGAACTTAATGAGGGAATAG 830 30 100.0 36 .............................. TTACCAATCAAATGGCTAAGATGGGATTAAATACCG 764 30 100.0 36 .............................. GTGTAATGTTCTAGGAATAGGAGTGCCACTTAAACT 698 30 100.0 37 .............................. GAATACATTGACAGTGTAAACCGTAGTATATAATTAA 631 30 100.0 36 .............................. TAAAGCAGATATAATCCAACTTGGGTGTATTAGGTA 565 30 100.0 35 .............................. TCCCATAACTCGCTATCATTTCCATTGCAGTATGT 500 30 100.0 36 .............................. CGGATATCGCTTGATCTAATTTTACTATTATAAAGG 434 30 100.0 36 .............................. TAAATTCTATACAGTAGGAAAACCACACTTAAAGGA 368 30 100.0 36 .............................. GGCAGATATAATGCAAGAATTGTGACTACTAATATA 302 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 117 30 99.9 36 ATTTTAATCTATCCATATTGGAATGTAGAT # Left flank : ATGAAGGTTTCAAAATATGGTGGTAGGAGGAGGATATTTTAATGTATGTTGTCTTGGTATATGATATAAGTGGAGATGAAAATGGACAAAAGGTATTGGGAAAAGTTTTTAAGATATGTAAAAAGTATTTAACTCATATTCAAAATTCTGTATTTGAAGGTGAGATTACAGAGGGACAAAGGGCAAAATTAAATGCAGAATTAAATAAACTTATTAGGAAAAAATTAGATTCTGTGATAATATTTAAAAGTAGAAATGAAAGATGGCTTGATAAAGAATTTTGGGGTAAAAATGATGATGCATTGTCTAATTTTTATTAAATTGTCGATGTGACATAGCGTAAATTAACTGTGGGTACGACAAAGTGCTGCAATGTGTGGATTTGAATTAGCAAAATGTTAAACTTATGCTATTATTAGCTAGATAATATATATAATAAAAAGACATCGACAAAAACTATGTTTGAAATGCCTACAAATAGGGACTTAAAGGGCAAACGC # Right flank : TTTCTAAAGGGGGTACATATGAGATTGTTAAACGTCAAATTATAACTAATTGAAAAGTCATTTTATTTCTATTATTAGTAGGTGATTTACGTCAAATTATACCTATGAAATCACTTTATCAATAAGGAAAAATCATTTTATTAATATAATTTCTTTTAGCCTACAGGCTACCTTATATAAAAAATGAGTAGCAATAATAGCTACCCAAGTATGTTAGTTTAAATCAATATGTTCAGCAATTGCTTGTAAGGCGTTAGCCACAGTTATCGCATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATCTATCCATATTGGAATGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 267-3390 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRAZ010000007.1 Clostridium bowmanii strain DSM 14206 CBC_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 267 30 100.0 36 .............................. CAAAACTAATTGGTTTTATATCAATACTAGGCCCAC 333 30 100.0 25 .............................. GATTAACAATAGATCATCTTTACAA Deletion [388] 388 30 100.0 36 .............................. AGTAACGGAATGTTTAAGTATGTTAATGGCAGATTA 454 30 100.0 37 .............................. TATAAAAGCATAATAGCATTTAAGGGCAACAGTAAAG 521 30 100.0 36 .............................. TGTCGTTTCTTACATGAGATTCAAACCCCTCAAATG 587 30 100.0 36 .............................. TATGAAGTATAAATACCATCAATTAATGTTTTCATT 653 30 100.0 36 .............................. CTTGTCTAAATCCTCACATAAATCATTGAATTTACC 719 30 100.0 36 .............................. ACCTCATGCCAAGGGATCATAACTGCAGCTGCTAAG 785 30 100.0 36 .............................. TTAGTTAATGCTTCTTTTATTCCAGCAATAGTAATA 851 30 100.0 35 .............................. CAATGTGTAATCTTAAAAACTCTTTTCTAAGTTCC 916 30 100.0 36 .............................. ACGGATTTGTCAGCGAATGCGAACTAACTTATAAAC 982 30 100.0 36 .............................. AGAGTTTTCATGAGCTGTCTTCCTGGCTGCTGAATA 1048 30 100.0 35 .............................. CTAAGATTATATCATAGTTTGCGTTTCTGTCGTTA 1113 30 100.0 36 .............................. GTTTAATATCCATAATTACCTCCTTTCGACAACTTA 1179 30 100.0 37 .............................. TTAAGAAATATATACTATCAATATCAAAGATTTTAGA 1246 30 100.0 36 .............................. GCCGCAGTTGAGTGAGTAGTAATTAATTGTATAAGT 1312 30 100.0 36 .............................. TCTTTTCCTTGCTGACGATATACAAATCTTAATCCT 1378 30 100.0 36 .............................. CGAAGAATGAAAGTTCAGTATAGAGGGAGTGGGAGT 1444 30 100.0 37 .............................. AAGCATGAGGCGTTGTCGTCTCCATATTGGTCAAGTA 1511 30 100.0 36 .............................. TGAAGTGACCTCTTCCATCGCAGGAAATAGCTTCTT 1577 30 100.0 37 .............................. TTTATAAATTCAAACCCTTACATGGTTGAACGATTAG 1644 30 100.0 35 .............................. ACTCCATAAACCAATTCACCTAAACTCCATATTTC 1709 30 100.0 36 .............................. TATATTTTTAATATGTAAACTACCTTTTTAGCAGAT 1775 30 100.0 36 .............................. TTACACATAGTATTTATAACTACATAATTGTTTCTT 1841 30 100.0 36 .............................. TTATATCCTGCACACTCTAATATATTAAAGTTGCGA 1907 30 100.0 35 .............................. TTTCACAGGCAATGTTGGTATCGGTACAACGGTAG 1972 30 100.0 36 .............................. TATAAGCTCATGTAACAGGATGTTAGTATAATTAGT 2038 30 100.0 36 .............................. AAGTAAATGCATAAGCTAAGTACCGTATATGGTCTT 2104 30 100.0 36 .............................. TAAGCTTCGTGAATTGGTCCATACCCTTTAGGTGGT 2170 30 100.0 36 .............................. AAACGCAATCTACTACAACAACGTTTAAGGTTTTAA 2236 30 100.0 36 .............................. CCAGTTCCATTAATAAAATCAAAGTCATTTAATAAT 2302 30 100.0 35 .............................. ATTTGTAAATATATTTTAATTAATTATATGATTAA 2367 30 100.0 36 .............................. AAGAATATATTAATGAATATGAATTAGAGAATAATT 2433 30 100.0 37 .............................. GGGTAGTAGTGATGTATGTTGTTGTATGTAATATAGT 2500 30 100.0 36 .............................. ATTTTCTGTGTATTGAAGTCTTATATTACTTATTTT 2566 30 100.0 37 .............................. TTAAAATAGGTTTTGCATCTTCTAATTTCTGCATGGT 2633 30 100.0 36 .............................. TTTAATAAGCAAACATAATCTAACCCATCAAAACTT 2699 30 100.0 35 .............................. CAGCATGCAGCCATTCTATATCAATTAAATTAAAA 2764 30 100.0 37 .............................. TAAAAACATGGAACTAAATACATATTTAGTATAGTGT 2831 30 100.0 37 .............................. ATAGAAAAAATTAGACTAGACACACGCAATTATAAAA 2898 30 100.0 36 .............................. TCCAACAATTACTGAAATTGAAGTAATTGCTCTTAT 2964 30 100.0 37 .............................. TCAGGAAGTAAAGTTATTCCAGCAGATAAAACAAATA 3031 30 100.0 36 .............................. GGAAGATAAGTTCAAAGTCTTCGGAACTAAGTTTTG 3097 30 100.0 36 .............................. GTGTTAATTCGATTGTCAATAAGTGGTGTAGGAATA 3163 30 100.0 36 .............................. GCAGCACAAAGTGCGCAAATGCACCATCAAATAATC 3229 30 100.0 36 .............................. GAAGAATTTCAATAACTTCTTTGACCTTTGCGTCTT 3295 30 100.0 36 .............................. TTTAAAAGATATAAGATATATGGTAAAATAAAGAAT 3361 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 48 30 100.0 36 ATTTTAATCTATCCATATTGGAATGTAGAT # Left flank : TATAAGAGTTTTAACTCTTATTTTAAAGGGAGAACGTTGCTTTGGCGGCTTGGGTTCTCCCTTTTCCTTTCTTTAGTTTTATAATAAGCATAAAATAAGCTCCTGATGATGTCAAGTCATTAGGAGCTTTGTTATAGTAATAATCTGCTTAGTAAAAAAGCAAATAACCACTAGATAATTAATAGTATTATAGTTATAATTTGACTTAGGAATGCAGTTACATAAAGCTATATTTTGACGCACTACAATGAGATTAAAAGAACTCAA # Right flank : TGGGAGTAGCAATCTCAGTCGTTCCGCCTTCAAAAATACCCCTGGGGTGTTTATTTTTACATGTATGTAAAAATAAGCTAAAGGCGGAATTAATAGTATAGGTTAACTCTGTTTCTGTTTTGTTACTATACGGCCACCCTAATTGTTAAGAATTAAAGTTTAGAAAGAAATAGACGATAAAGTATTAGAAATAATTTGAAAAATACTTAGCATACATAAATTATATAAAAATAGGGGGATTTATATTGATAAACGTGTTTGATGTGTTAACAACAGAAAAGTCCAGAGTGAATTTTATGAAAGGATTAGTGTACCTATCTAAGTCACAGGAAATTTTTGAAGGAACAAATGAAATTAGTCCTGAAGAAATGGAATCATTAAAAGGCGCAATGCAAACTTTAAATATATCACAAGAAGAAAGAGTAAACATAGAAAAACTTATTTATTCTACAGAAATTAATTCGGATATTGAATTTGATAACATAAAGCAATCATTATTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAATCTATCCATATTGGAATGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //