Array 1 123736-120193 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058984.1 Polaribacter sp. R2A056_3_33 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 123735 46 100.0 30 .............................................. TAATGCTTCTGGTGCCGCCTTTTTAATTTG 123659 46 100.0 30 .............................................. AGTTTATTGGGAGAAGATTAGACACTATTA 123583 46 100.0 30 .............................................. GTAACCTTATTACATCGCCTAAATGTAAAG 123507 46 100.0 30 .............................................. TACCTTTACTGTTAGGTTTACTGTAGTGTA 123431 46 100.0 30 .............................................. AAGTGTTCATTTATATCTCTAACACTTATA 123355 46 100.0 30 .............................................. TATCATCAAAGTACCAAAATTTGCCACGTC 123279 46 100.0 30 .............................................. AATCAATTCTTTGTGTATCGTAATGAAAAG 123203 46 100.0 30 .............................................. TGATTAATTAACAATAAATTTATAAAAAAT 123127 46 100.0 30 .............................................. ACAAAATCATTACTTAGATAATGAAAGATT 123051 46 100.0 30 .............................................. AACGGACAGCCTAAAGATGGTGTTCACCAA 122975 46 100.0 30 .............................................. TTGGAGAATAGAAAAGGTACAGACAGCGCC 122899 46 100.0 30 .............................................. TTTAGACAATCAATTGGTTATAATAGTAGT 122823 46 100.0 31 .............................................. CAGCATCTAACCAATTACCAGTTAATGTTGT 122746 46 100.0 30 .............................................. TGGAGAAGTGGTTTAGTAGATAGTAAGCCT 122670 46 100.0 30 .............................................. ATATCACTAAACATATCCCTTGAAACCTCC 122594 46 100.0 30 .............................................. TATTATCTCTTGTATGCTCTCTTTTCCATC 122518 46 100.0 30 .............................................. TATTATAGGTTGGTTTATTTCTGTTCCTAC 122442 46 100.0 30 .............................................. ATTATTTGCTATTTGTTTTGTTCTCCTATA 122366 46 100.0 30 .............................................. CGCAACGGTATGTAATTTGAAGTCTTTCAT 122290 46 100.0 30 .............................................. ATAGATGATAACCGTAACCAGATAGAACAA 122214 46 100.0 30 .............................................. CACCTTTAAAGGTATATCTTATCTATCCGC 122138 46 100.0 30 .............................................. CATGAGACCAATTAGAAATAACAACACCCT 122062 46 100.0 30 .............................................. GGAAATATTATTAATGTTCCTAACTCTTTT 121986 46 100.0 30 .............................................. CTACAGTCCAAAACACCAACTATAATTCCA 121910 46 100.0 30 .............................................. ACCTTTGGAGACGCTTACAGAAACGACTTT 121834 46 100.0 30 .............................................. TAATCGCTTCTTAAAGTTCTGTAAATTTAA 121758 46 100.0 30 .............................................. ATGGGTAGAATTCCTCTACACCTCCTTGTC 121682 46 100.0 30 .............................................. TAAGGGTATATGGGTTTTTATTTTCGTTTA 121606 46 100.0 30 .............................................. ATTGTTGCATCTGCAAAAACAAAGAAATCA 121530 46 100.0 30 .............................................. TGATACTCGTCTTTAAGATTTAAAGGCACG 121454 46 100.0 30 .............................................. TCACCCCTGAGTAGTCTACGTCTCTCACTG 121378 46 100.0 30 .............................................. CTAAACCCCCTTGTTTCATTTTACCAATAG 121302 46 100.0 30 .............................................. AAGGGTACTGAGTCTCAAAAAAGGATTAGC 121226 46 100.0 30 .............................................. ACAGGGTAAGGGCGTACTAGGAGCGGACCA 121150 46 100.0 30 .............................................. AAAATCATCATTAATATGAATTTCTAATTT 121074 46 100.0 30 .............................................. ATATGCTGGATTGTTTAATATACTTCTAAT 120998 46 100.0 30 .............................................. AATTAATGTTAGCAATGAAAGACTTAACAA 120922 46 100.0 30 .............................................. ATATCGGTGTCCATTGATTAATATTAACAT 120846 46 100.0 30 .............................................. TATTTACGCTACTAATAATACACAACAACG 120770 46 100.0 30 .............................................. AGTCCTTCTTGGCTGCTTTGTTTTGAATAT 120694 46 100.0 30 .............................................. GAACGATAAGATGAAAGAATCAGAGAAAGC 120618 46 100.0 30 .............................................. AACTGCAGTATAGCGCACAGAAAATATTTT 120542 46 100.0 30 .............................................. GTAACCATCTTTAGTGTAGACTACCTCATT 120466 46 100.0 30 .............................................. ATTTAATAATTAATGTGTATATAGTAATAT 120390 46 100.0 30 .............................................. GCGTTCGGTTTGTTTTTTTCTTTAGTTTTT 120314 46 100.0 30 .............................................. CAATAGCGCCAATACTAACGCCACTACTTG 120238 46 89.1 0 ............T.........................AGT..T.. | ========== ====== ====== ====== ============================================== =============================== ================== 47 46 99.8 30 CTTGTGATTGCTCACGTAAAAATACAATTTGAAATCAATTCACAAC # Left flank : ACAGGAGAGTTAAGGCAAATAAAATACCCCGAACTAGATTAATAAAAATGTCATCAAAAAGATATAATGCTTATAGAGTTATGTGGGTTTTAGTATTTTTTGATTTACCAACAGAAACCAAGAGAGAAAGAAAGGTTGCAGGTCAATTTCGTAAAAAATTAATTGACGATGGGTTTACTATGTTTCAATTTTCTATTTATTTAAGACATTGTCCTAGTAGAGAAAATGCTAAAGTCCATACTAAAAGGGTGAAAATGAGTTTACCCGAACATGGTAAAGTGTGTATTTTAGAAATTACAGACAAACAATTTGGTAATATGGAATTATTTCATGGGATAAAAGAAGTTGACTTACCGCAACCTACGCAGCAATTGCAGTTATTTTAAAATAGGATGAAAAAAATCTAGGTAAAAGATATTAATCTTATTTAGATAACAGAATTTTGTAATCTAAAAAAGGAATCCCAAAGTATTAATTTTACTCAATATTTTGGGATTGAC # Right flank : AATAAAAAATCAACCAAATCCCCTCCATTTTCTAATTCAATGCTTTCCAATAAATTACTACATTCAATTTTATATCCTTGTTTATTTAAAAGTATTGCTTCTTTGTTCCAATTACTATAAACTGTTTTATCTGGATAAGCAATAACATTAAATTCTTTAATAGATTTTAGCATTTTTTCTTTAAAACCTGTTTTACTACCTGTAGCTAACCAAATGAAATTAGGAATCATAATACTCATGATGATTGCAGTTTTTTCTGATTCTACAATACAAATTGTATCACTTTTAGAAATGCTGTTTATAAGGTGTAGCCCAAATAAACATTGTTGTAATACAAAATTATTTAATTTTAGTTGTTTGTGTATCCAGCTAACATGATTAAAAGGTTTTTTAACTCTTTTACCTGTATTACAATTGTACAACATAATCTTGCCACCACGTATTACGTTTTTTGTGTCTATTAGCCAAAATATTGTAGCTCCATACCAATAGTTTGTTGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGTGATTGCTCACGTAAAAATACAATTTGAAATCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 259024-256352 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058984.1 Polaribacter sp. R2A056_3_33 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 259023 36 97.2 39 ........A........................... TCATCTGACACAACACGTGTGCAGATATAGATGGCTGAC 258948 36 100.0 36 .................................... TATCCATGATTCGTGGTAATCCACTCCATCGGTTTC 258876 36 97.2 38 ..........G......................... GCTTCCCTAAGATATACGGACGCTAGTACCGTATCATG 258802 36 100.0 37 .................................... TACTCTTGAATTCATCATAGCGTATAGCTTTGCTATC 258729 36 97.2 37 ..................................C. CCATCTATAAAGTATTCATAATCAATTTTTAGAGGAC 258656 36 100.0 37 .................................... TGGGTGAAAACAGTATTTGGTTCGATATCATTTAGAC 258583 36 100.0 36 .................................... AACATAACGTTTACATTTCCGTTTGCTCTTTTCACG 258511 36 100.0 38 .................................... TAATTAAGCTATATATTTTGTGATGATGAAATTAAGGC 258437 36 100.0 38 .................................... TTTTTAATTTTAGTGTCACATGCCGGTAGTAATACAAC 258363 36 100.0 37 .................................... AGTTTTACGGTGTCTAAAAAATGCTGTGCTTTCTGTG 258290 36 97.2 39 ........C........................... CCTTCATTATAGTCAATACTTGTGTCTTCAAATAAGATA 258215 36 97.2 38 ........C........................... GTAGGAGTCTCCTCTGTAATCTCATCATTATCTGATGA 258141 36 97.2 37 ........C........................... TTCTTCTATAAACCTCCATAGTTTATACCTTAATTTA 258068 36 97.2 35 ........C........................... AGAATAACTATTACCTGCTAATATCTTCAAACTAA 257997 36 97.2 37 ........C........................... TAGTCAACTTGAGCCGTGTGTTTAACGTATGCTAATG 257924 36 100.0 38 .................................... TTTTTATTCTCTACGTCAATTGGCATTATCCAGTCGTG 257850 36 100.0 37 .................................... TTGTTCAGTTGTGCTTTGATTGTACTTAGCATACTTA 257777 36 94.4 35 ...........A.....................T.. GCCATGAAGTCTACATTAGCTGCTGCTATCTTAGA 257706 36 100.0 37 .................................... GAATAAGTCTGCAACTTCCAGTCTGTTTCCACTCTAA 257633 36 100.0 36 .................................... GCACCTTTTAATACTCTTGCCGTAGTTGTATTAATC 257561 36 97.2 39 ........C........................... AGGTAATTTATTTACTGTGCAAGTAAAAAGTTAATTATC 257486 36 100.0 36 .................................... AGTCCATGATATTTTGTAGAACTGACTCCTTTGAGC 257414 36 100.0 37 .................................... ACTGAAAGAGTACCATACTTCACATCCGGTGTAATCC 257341 36 97.2 38 ........C........................... TACAGATGATTATAACTACCTTCTACTTCTTCTAAGTA 257267 36 100.0 38 .................................... GTGCTTAAGAATGCAGGGTTACCTGCAGGTTGAATTAC 257193 36 100.0 36 .................................... AACTCAACTTCTTTTCCTGTGTTACCAATTAATGTC 257121 36 100.0 39 .................................... GGTTGATTACATGCTATAGAAATGCATTTTTTGATACTC 257046 36 100.0 34 .................................... CCTATTTATCTTGGCTAATCCTCTATTAGATAAC 256976 36 100.0 37 .................................... TGTCAACTTTTTGACCTCTAAATTTTATTAATAAATC 256903 36 100.0 38 .................................... TTGCTAGCCAAGTAGCATTCTTTTTGTCCGAATTCATC 256829 36 100.0 37 .................................... CTAAGAATATTAGAGGTAGAGTAAATAGATAATAAAC 256756 36 100.0 39 .................................... CTTTCATGTTTTTCTTCTTGGGTGTATATTACTTTTGAC 256681 36 100.0 36 .................................... ACATTAAATGATTCCCATACGATTGGTTGAAATTAC 256609 36 100.0 35 .................................... TACCTCTAACAAAGCGTTAGCATCGTTAAGAGATC 256538 36 100.0 38 .................................... TCCTCCTCTTCTAAATCAGGGATAGCTTCCCTAAGATA 256464 36 97.2 41 ........C........................... TTAGGAGTTCGTGCGTCAGGCCCGTAATTCTTCTGAATGTA 256387 36 91.7 0 .................................ATA | ========== ====== ====== ====== ==================================== ========================================= ================== 37 36 98.8 37 TCAAAGAGTAAGTTCCATTAAAACAAGGATTAAGAC # Left flank : AAACACAAATATTTAAGTTAATTATTTACAATTTTAAAAACAAAATCTAATGGTTTATTACAGTACAGACATTTCAAAATTAAACGCAGTGCCTCTTAAAGCAATATCTTTGAGTAATTTAATAGAAAAATTCTCAGACAAATCTTTAAAATATACAGTAGATAAGCTTAGAAAAGTAAAGCGTTTAGATAAAACCTCTTTTGGTTTTTTAAAAAAGAAAATTACCTTATTTTATTGGAGCCGAATTTAAAGAGAACTTTCGTTGTTCAGAAAACTTTTGTAAAGTAGATCTCGTACCATACATATTGAGCTTTGGGCAAAAAGTTTTGCTCAGAAATTAAAAGTTTTTATAGAATAATTAAATATTATATGTATTTTAGTTAAAATATTTTATAATTTTGCAAACTCAAAAAAACGTACTAAAATTTGGTTTATTTCAAGGTTTTATTGATGAAGTGAATTTTAATAAATTGATTTTTAGAGATTTGGGTATTCAGTCC # Right flank : AAGGGTAAACAGAGCGCTACAAACCAAGAAAAATAAAGAAATGTTCAGCATGGTGTTAAATGTGCAAATAGATTGCACATTTCTGTAGTACGTTTGTGCTCATCAAAAATAAAAAATAGGTAAAGCCAAAAGTTGGCAACAAGCTAAAAAAAAATCCGAACATTAAAAAAAAAATGAAAAAAATTGTACTTATTTCTTGTGGTTCAAAAAAATTGAGCATAAAAACAAAAGCTAAAAATATGTATCAAAGTCCGTTATTCAAACATAGTTTAGAATATGCTATAAAATTGAATCCCGACAAGATATTTATTCTTTCCGCACATTATGGACTACTTGAATTAGACACTGAAATTGAACCTTATGATGTAACTATTGCGAATATTAGTAAAGCTAATCGAGAAAAAAAACCTCAATTAAAAGTTCTTACTAAAGCCGAAAAAATTATTTGGGGAAAACAAATAATTGAAAGCTTGTCAAAATTTTCAGATTTAGAAAAGGAC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAAAGAGTAAGTTCCATTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //