Array 1 13005-11819 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000126.1 Nostoc sp. 106C 291_13099_30.9952_651_13099_0.4008702954424, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 13004 37 100.0 37 ..................................... GCTTTTGAATGGGAATCCAGAGTCTTGAACCCATTTT 12930 37 100.0 38 ..................................... TACTGTAGATTATGACGCTCGATACAGGCGCAAAGATT 12855 37 100.0 33 ..................................... TTTCTTCCCAAACAAGGGCAATATGCTGAAGAG 12785 37 100.0 33 ..................................... ATGCGTGACCTATATGCTACCCACAGGTATCGG 12715 37 100.0 33 ..................................... AATTACTAATACTGATGGACTATAACCGTAAGA 12645 37 100.0 35 ..................................... TATATATCTGCCTGCGTTGACATTAAATCTAATTG 12573 37 100.0 35 ..................................... AACACTAACTTCATCTCTTTCAGTATCAATAGAAT 12501 37 100.0 31 ..................................... AAAGCAAAAGCCCAGCCGGGGTCCTTACAAC 12433 37 100.0 35 ..................................... ATCAAAATTTATAAGTTAATCCCTTTCAAAGCAAC 12361 37 100.0 33 ..................................... TTGAAAGTTGTACCAACCAAGTCTGTCTTTAAC 12291 37 100.0 36 ..................................... TCGTAATCAGCAAGTTGAACTAAGTGGACAAGCGTT 12218 37 100.0 40 ..................................... AAGGATTTATCAGGAGCGGAAATAATCGCCGCGATCGAAA 12141 37 100.0 36 ..................................... ACCTGATATAGTCGCTTTTGGTGATACCTGCAAACT 12068 37 100.0 36 ..................................... GCACCTTCGCTCAATTCTTCCGGCGATAGCCACAAA 11995 37 100.0 32 ..................................... CTAGAAGCTCAAATCGGGGATGCGAAGGCAGA 11926 37 91.9 34 ...........A.CT...................... TGCAGAAAAGGGAAATTATATGTGGCGTATCTGG 11855 37 91.9 0 ...........A.CT...................... | ========== ====== ====== ====== ===================================== ======================================== ================== 17 37 99.0 35 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : TGCTTACCTGAATGAATTAATCTTTGCTCGCTAAATAAAAACTGGGATGCTCCCGAAACTTGTAGATAAGAAACAACCTCTATCAAGGTTTGAG # Right flank : TCGCCATCTCCCAATCTTCTAGATACCGCTCTGCCTTCGGTAATTGCAATTAATTAAATTGCGCAAGTCATGATATTTATCGGTGCGTTAAGCGTTGCTATAACGCACCCTACTGGCTGGACTGACACGCCTAAAATGGGGCGTTACAGAAATCCATTTTATCGGTGTTCAAACCGAAGTTCAGATAAGCTAATGTATTACTTTAGCGGTGTCATGCTACTACAATTTAAGCTTTACTTTGTCAATCATATCTAATTCTCTTTTCCCTGTTCGCTATTCCCTCAGCTTTATTAAAACAGCCATAGCCAAACTGGTAATGTAACAAGTAACACTACTGCCCCTGCTACCAAGGCAGTCACAGCTAAGTCGCGATCGAGATTGAAGGTTTCAGCAATTACTAGGGTGGCAAATCCTGGTGGCATTGCCATTTGGAGCACAATTACTTGGGCTGCTGAACCAGTCACACCAAAAAGTGGTAAGGTACTGCCAAGAATTAGGGG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 48052-47202 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000082.1 Nostoc sp. 106C 32_97947_31.0763_81_97947_0.408996702298182, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 48051 37 100.0 36 ..................................... AACTAGTTAACAAGTAGCTCAACCTCTACTACGGAA 47978 37 100.0 37 ..................................... GGGACAAGTGCATTCATACCCACTGCCACCAGTAACA 47904 37 100.0 34 ..................................... TGGGGAGCTTAATTATGGAATTTAAAACTTTTAA 47833 37 100.0 37 ..................................... CAATGTGTTTGCTCGTGAGTGCCATGCTCAAACCCAA 47759 37 100.0 35 ..................................... CAGCGGCGATCGCCAATAAACCAACTGCCCGCTAT 47687 37 100.0 39 ..................................... TACAGCTACAGACGGAAGAATTTGTAAAGAAGAATATGC 47611 37 100.0 35 ..................................... CGCAATAATTCGAGCATCTTCCCCGTAAAACAGTT 47539 37 100.0 40 ..................................... ACAAAATAAAGCTATTCTCAACAAGGAGTAATACTGCAAA 47462 37 100.0 36 ..................................... TACAGATATGGTTTATGTAAACGAAGCCGCAGAAAG 47389 37 100.0 35 ..................................... AAAATTTATCCCTATTTTGCGCCAAATTATTCTGA 47317 37 100.0 42 ..................................... TTAGAATTCCACAACGCAATGAACAGTTCAGGGTGTTCAGAG 47238 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 12 37 100.0 37 ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Left flank : AAAGATTTGCTGAAGGATATCCTTCAAAATTAGAAGCGGCGATTGAATATTTGCACAATAGTTAGTAAATGTAAGATAAAAATTTTTGGCGTTGCATAAATACGGGATGAATCTGCGGTTGAAACCATTGATAATTCGTTCCAAATTGGGCTAGATCATCTCATAATTCAGCAACGCCAAATTTTTCAATAAATTGAATTCGTTGGTGGCAAAATGCCAATCGATACCAGAGTTTTTTTGTTTGAGTCTGGCGTCAACCAGTAGGTGTTTGAAAACAAGAGTCAAATTTTGCGCCCCAAAAGCTTACTGCCTATGGTTTTGAAGCATTTTCCATAGAGTTGGAGGTTGACGCAAACTCCCTAACCCTTACTACACAAGCTTTTGAGTGTATTTTTCTTATGTCACTCTTGACAACTCAATGCCCCAAAAGTTACTTTGATTGCAGGTTGACGCAACTGTACCTTGAAAACCAAATATATCCATGCTTTCAACTCCGGGCT # Right flank : TTAGAATTCCTGATTTTTGGGAAAAAGTAATTATAATTGCAATCAATTAAAATCCCTGTAGCAATCATAAGTTATTCGTGAACACCAAGATACCCGACTTCTTCAAGAAGTCGGGTATCTGAACCCTTCAATTGTCATAAGTAAGTCGGTGCTGATATTTAAAGCTGGACTTCCCCCTGCAAATATACCTACATAGGCTCAAAAGCTTAGCATTCCAAGGGTTTTAATTGCTGAGTAAAATTTCTGTAGCCATGTGCTTCATTCACGCCTACAAGCGATCGCTAATCATATTGAATCTACAATGTTCTGCGCGATCACCAAAACGGCTATTGCTCAGACATGGGTACAGTTTTTTCAGTCAACAATTGAAACCTTTAATTGGTATATGTTTCAGATGCTTTAGTACATTTGTATGGGGTAAGTCCAGTTAAAGCTATGTTAAGGAATGTAAATGTAGGGTGTGTTGTCGCGCAGCGCAACGCACCGACGCATGAGCAGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 1 231257-232734 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000119.1 Nostoc sp. 106C 2_232820_30.2538_3_232820_0.410505970277468, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 231257 37 100.0 31 ..................................... TACTAATAGATGACATACCAATTACTTTCAG 231325 37 100.0 38 ..................................... CATTATTTAGATTACACACTCGCATGGCATAAACAATG 231400 37 100.0 35 ..................................... CTGAATATTTAATGCATAAGATGCAGAACCGTCGA 231472 37 100.0 33 ..................................... CAGCAATGCAATGAACATTAAACTTTGATGTGG 231542 37 100.0 35 ..................................... AAAAAAAAGGAAAAGTAAAAATGTCTACACCACTT 231614 37 100.0 35 ..................................... TAGTCCTTATGGTGTAGAAGAGTTGACGAATGATA 231686 37 100.0 34 ..................................... ACCCTCTCAGTCCTCGCTGGTGGCGGTGGCTCAA 231757 37 100.0 33 ..................................... ACTAAACAAAGTATTACTTAAATCTTCTTTGTC 231827 37 100.0 34 ..................................... CTGGGTGTCGATTATCTCATGCACCTTACATTAG 231898 37 100.0 34 ..................................... AGGGCACTATTAACTTTGAGCAATGCCAAATTGC 231969 37 100.0 37 ..................................... TTCGTAGATAGAATTATTTCGGTAATATGGCATACTT 232043 37 100.0 38 ..................................... AGGCGAATTAGCGCTAGCTGCCGCAAGAAGGGCAAGAG 232118 37 100.0 34 ..................................... ATTGCTAGCTTTTCCCATCGCTTCCATGTGCGAT 232189 37 100.0 34 ..................................... ATAGTTTTTAACTGAACTAGCGGCACTTTTAACA 232260 37 100.0 33 ..................................... GGACGTTTGCCGTTGCATCGGTGAGAGTAACTG 232330 37 100.0 35 ..................................... GAATTTCTTGGTTAGGGAGGGAGATACAATATCAG 232402 37 100.0 36 ..................................... AACAGTACGGTATAATCGATCGCATATCAGCTTTGA 232475 37 100.0 36 ..................................... AAAATATTAAAGCTACTAGCTAGGGGATATAAAGAT 232548 37 100.0 39 ..................................... CCGCCCAGTGAAAAGTATGCTTCTGACACTACAACAGGC 232624 37 100.0 37 ..................................... AGAAAAATAATGCCTAAGCAATCTACAGGCACACTGG 232698 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 21 37 100.0 35 GTTCCAATTAACCAAAATCCCTATCAGGGATTGAAAC # Left flank : CTTGGCGACCGCCAACTATTTCGCTGATATCAGCATCACGTTCTGTCGCAGCCGGAAATTCTTGGCGGAGATAAGCTATTAACTCATCACGATTGGCAAATTCTCGTAGCATTTTTTTATTCCTGTATAATTTTGTGTATAAAACCGATAGCATCTATTGTTATTTCCTCTGTGCTTGCTGTCCAGGTAAAATTGAGTTCATCAGCGGCGAAATGCCAATCGATACCATAGTGTTTTTTGCTTGAGTCTGGCGTCAACCAGTAGATGTTTGAAAACAACAGTCAAATTTCGCGCCCCAAAAGCTTACTCCTAGTGGTTTTGAACCCTTTTTCACAGTATTGAAGGTTGACGCAAACTCTCTAATCCTGACTAGACAAGGTTTTCAGTTTATTTTACTTATGACACCCTTGACAACTCAATGCCACGAAAGCTACTTTGGTTGGAGGTTGACGAAACTGTACCTTGAAAACCAAATATATCAATGCTTCCAACTCCGAGCC # Right flank : CTAGTTCTGTTTTAGAGGTTGCTATTAGCCCCAGAAACGTTGAATGTTAAGAAAAACCTGATAAAAATAACCCAAAATATGTTAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAACCAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 3685-2552 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000184.1 Nostoc sp. 106C 3_173653_29.8842_5_173653_0.409091694355986, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 3684 37 100.0 38 ..................................... TGATTGCATGGTTGAACGAGTGCCACGCGCAGAATTAG 3609 37 100.0 34 ..................................... CATGCCTTGTTCTTGTAATGCTTTTTCGTAGTGA 3538 37 100.0 36 ..................................... CAATTGAACCCGGTGCTGAGTATTGGTGGTGTAAGG 3465 37 100.0 37 ..................................... GTGACGTTAGCAAGAGTATAATTTCTGCCTTAAAATA 3391 37 100.0 32 ..................................... TCAGCTTTTAATTGATGCTCTTTCGGCTTTGG 3322 37 100.0 34 ..................................... AAGGCTTTGCGCTGATTGAAATCCGCAGCGCATT 3251 37 100.0 32 ..................................... ACTAAAGGCGCTTCCGAAGTTAGCGGTAGTTA 3182 37 100.0 42 ..................................... AGGCGCTTATGAGCTAGCGCGTAAAGTACAAACTGCCGCCAA 3103 37 100.0 35 ..................................... TATTTTTTTCATACCAATCTGCGATCTCTGGCACC 3031 37 100.0 42 ..................................... AGCCATAAACCCTCTTGATGTGTGTAATCAAGTTATATCAAG 2952 37 100.0 36 ..................................... TGATGTGGAAACTCCCTTGCTAGTTCTTGCGCTTTT 2879 37 100.0 35 ..................................... TTTGATCTCTGCACCTTGAGCAATCACTTTGTTTG 2807 37 100.0 36 ..................................... GCATATATCTCCACTTGGGATATTGGATGTGAAAGG 2734 37 100.0 36 ..................................... ACATTTTTGTTGAGGAGCAATCGCCCCATGAATGAA 2661 37 91.9 36 .......................AT...........A AACAGTGCGCTCCTAAAAGGAATATAAGGTGTTAAG 2588 36 75.7 0 ...C..CC......-....T...AT........G..G | T [2577] ========== ====== ====== ====== ===================================== ========================================== ================== 16 37 98.0 36 ATTGCAATTAACAATAATCCCTATCAGGGATTGAAAC # Left flank : CAGAAGACAAACGCCGCACGAAAATCCACAAGGTTCTCAAATCTTATGGACAGTGGATGCAGTATTCGGTTTTTGAATGCGATCTGACACAAACTCAGTATGCTAAACTGCGATCGCGTCTGTCTAAATTAATCAAGCCAGACCAAGATAGCATCCGTTTTTATTTCCTCTGTGCTTGCTGTCAGGGAAAAATTGAGCGCATCGGCGGCGAAATGCCAATCGACACCACAGTGTTTTTTGCCTAAGTCTTGCGTCAACCAGTAGGTGTTTGAAAAATAGAGGCAAATTTTACGCCCCAAAAGCTTACCTCTTCTGGTTTTGAACCCTTTTACGCCTATTTTGAGGTTGACGCAAACTCCCGAATCCTTTCTACACAAGCTTTTGAGCTTGTTTCTCTAATGTCACCCTTGACAAATCAATGCCCCAAAAGCTACTTTGACTAGAGGTTGACGCAACTGTACCTTGAAAACCAAATATATCAATGCTTTCAACTCCGGGCG # Right flank : GTTGATGATATTTAGCTTACAGAGAAAATTTAAACTGAAATTCGTTTAAATCTCTAATTATGGATTTCAAAGTATTTGAGTTAAAATTCATCACAATCCCTATTAAGGGTGATAATTTGTAACTAAGTATTACTACTGAGACATAATCTGCTATAAGCTGAATAAATGAACTACGAAACAGCTCGCAAAATTCTTATAGACCAAGTATTGTCACCCGAGGACAACCCAGATTCCTTGTTAATGCGTATGAAGCAGGGTAAACCGCCAGTTCCTGGTCAAATCACCTCGATGTTGTTAGCGTTAAAAGTGGTGTTTGAATCTCTCAAAGAAGCCTCCACTCTCGATAGAGACTTAGCTTTTGCACTTTTTGAGTTAAGTATTAAGACTCAACAGTTATTTGCCGCAGGACGCAAGGCTGGAGTTGATTGGCCGCCATTACTTAAAGAAGATTTGCTACGAATTTCTCTAGCAGCTGAAAGTATTTTTTCTGGTACATGGCA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACAATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 75725-76275 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000238.1 Nostoc sp. 106C 41_82149_29.8851_103_82149_0.411325761725645, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 75725 37 100.0 41 ..................................... AATCAGTAGCACTCAAACACTTCTTAAGGCGCAACCAATGA 75803 37 100.0 34 ..................................... TCAGCGGCAACGGGATTACCCGCAAGCGCTTCAT 75874 37 100.0 41 ..................................... ATCCGCTTTTACTTTGGGGGATATTCCAAGTCACCGGGAAA 75952 37 100.0 37 ..................................... TTATTAGCAGCGGGGATGAAACTTCGTAAACACCGCA 76026 37 100.0 34 ..................................... GTAATACCACCCATCGTCCCAACAAATGATGGTG 76097 37 100.0 34 ..................................... CTTGTTCATATAAAAATGAAGGAGATTTTCGCAG 76168 37 100.0 34 ..................................... GCCGACTAAACTCACAATGGGTAAGAACTGCTAT 76239 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ========================================= ================== 8 37 99.7 37 GTTCCAATTAATTAAAATCCCTATCAGGGATTGAAAC # Left flank : ATTGGCACATAGCGGTCTAATAACTGTAACGGTGCGCCACAGCTATTACAAAATTTGTTTCCCCAAGGTTGAGGATAGGGACGTTGACAATCAGGATTTATGCAGTGAACCGCACTCTGAGTGATGTGGGACACAACCGCTAAAATACAAAGGCTGACTTGATTTTAGCGTTTCTTGAGATTTCTGGAATTTATTGATTTCATCGGTGATAAACTGCCAATCGTTACCACAGTGTTTTTCCCTTGAGTCTGGCGTCAACCTGTAGGTGTTTGAAAACAAACAAAAAATTTTGCGTCCCAAAAGCTTACTCTTGCTGGTTTTGAACCCTTTTTGCAAAGTTTGAGGTTGACGCAAACTCCATAACCCTTTCTACACAAGCTTTTGAGCTTGTTCTACGCATGACACTCTTGACAACTCAATGCCGCAAAAGCTACTTTAATTGGAGGTTGACGAAACTGTACCTTGAAAACCTAATATATCAATGCTTTCAGCTGCGGGCG # Right flank : TATTAGAATTGCTATAGTACTACTGGTTATGCCCATCCCAAATCATCGGGAAATCATAATCTGAAAATGCAGGAAAATCTTGAGAATTACTGCGGCTTTCTTCATCCAGCACTTTGACAACCTTGTTATACATATCTTCCGCCTGTTGTAGAGAATCACCAATGCTAGTTAATCCCAACTTGCCAAATTGAGAAAGACAACCCATGAGATGAAACACCGTACCTGTTTCAGTGCAGCTATCAAAGTGCAATCTGTGGTGGGCAATAATATCCATTAAATCGTTGGGTAATAATCCCTGATAACGGTCTTTTTGTAAGTTGTCGGTGGCGATGTAGTATTTAGGACGCCCTTGTTGACTGTAAAATAACCCCGTAGATAGGTCATAGCGACCGTTCGTTAATAATTTCAGGGTCATGAAAGGATGAGTAGTGCCACCTTTGCGCAGATTAATTTCGATCGCCTGAATATCCCACGGTCCATTTTCCTGTTCAACGGCGATA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATTAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 114690-116092 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000127.1 Nostoc sp. 106C 4_166487_29.3455_7_166487_0.410398409485425, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 114690 37 100.0 33 ..................................... AATTACCTAACTATCGAAAAACAACAGTATGAT 114760 37 100.0 43 ..................................... ACGGACGGGCATGGAATTGCTACGGGCGGATGCCACTGAAGAA 114840 37 100.0 34 ..................................... ATTGTGGTGGCAAGTCCTAGTTTCGTACTCATTG 114911 37 100.0 37 ..................................... GTTGATAGGCGTAGGCGCAGATTTAAATAAGTGTAGT 114985 37 100.0 35 ..................................... TGTTTCGTCATCCCACCAAAAATCATTCCCTTCAA 115057 37 100.0 33 ..................................... GCTTTTAAATTTTTTCTGACAGACATTTGGAGT 115127 37 100.0 34 ..................................... TATGCTTATCTCCCCGGAAAGAAACGGATAAGCC 115198 37 100.0 34 ..................................... TACTTACTAACGGATTACCCAATTGACTTAGAAG 115269 37 100.0 33 ..................................... TATTACGCGCAACAGTTTAATATCGATCTCCCT 115339 37 100.0 34 ..................................... CGCAGCGCACTTAATACACTGCCCGCAATATTAG 115410 37 100.0 35 ..................................... TCGTTTCTTCAAAATTCCGTTGAATCCGGTAACCT 115482 37 100.0 34 ..................................... TCTAATGCCGTAACTCTTTCTGCTGCTTTTTGTT 115553 37 100.0 35 ..................................... ACCTTGAATTAGAGGGGAAAAATAAAACCTACAAC 115625 37 100.0 36 ..................................... AATCTTGGGCATAAAACAAATTGAATCTCGCGTATT 115698 37 100.0 31 ..................................... TTCGCCGCTTCTGGCGCATCCACTCTCTTTT 115766 37 100.0 39 ..................................... ACTGAACTTCTCTAAACTGAAAGTCTGCGATGACCTGTA 115842 37 100.0 34 ..................................... CAATTTTGTGATTATCAAAATAATACTCAATAGC 115913 37 100.0 33 ..................................... AAGAAAATGCTTAATGTAGCAGCACCTAAACAT 115983 37 100.0 36 ..................................... CGTAGAATGCGCGTCTTGTTTCTTGCAGTTGAACAT 116056 37 91.9 0 ................................AC..T | ========== ====== ====== ====== ===================================== =========================================== ================== 20 37 99.6 35 GTTGAAATACAATAAAATCCCTATCAGGGATTGAAAC # Left flank : GGTAGAATTACAGGTATGACCCGTTATGCTTGTTTTTGGGTAGAAAAAGGTGAGATTATCGCCCCCATCGAAAACTTACGTTTTGATGAAAGCCTCTATCGCTTTTGGGGAGATAATTTAGTAGATTTTACCAATTTTCAAGAATTTATCCCCGAAGTCGGAACCTACGAAAGCCGCCAACTCGGAGGCAGTCTTGTTCCAGGAATGTTGGTAAAAGATTTTACATATACTTTATAAGTAACTACGGAATTGCGTCAACCAGTAGGTGTTAAAGAAACGAGGTGCAAAATTTTAGCTGGATTTACTGCTGCATCAAGGTTTGAGCCTTATTGCTCAAAAAACAGGTTGACGCAAACTCTAGAATTCAGGCTGGGAAAGGATTTCAGAAAAAATATTACCTTATCTCTTGACGATACCTAGCGCTGGAATGCTAACATGACTCCAGATCGACGCCACTGCACCTTGAAAACTAAATACAGTTTGCCTTTCAACACCGGGCC # Right flank : TAAAAGTTTGACTACACTATCTATTTCTGTAAACTTCATTGATGAGAATATCTTTAACACTGAAGTAAATAATTAATATAGTTAATAAAAATTGGGCAAATTGTAAAATTGGATCTAATCGCCATCCTTGAAAAACAAAAATAAAGCCACACAGCAACATGACACTTGGTATCAAGAGTGCTTGAAGAATATAAATAACAAAAGTTATACTATTAAGCCTGTTAGCACGTCTAAATAGCAAAAATACCATATAAATCATATACAATATACCGAAAATTATATATAGTATTCCCAGCAAGCTAGCTGTATTTAAACCAAAATTAACTTGCATAAAAATTAATGCATTTAAAATGGCCATCTTAATATTATTCCTCAGTATTTAATCACTTTATCTATTGCTAGAGTTGGTTTTAGTTACGTTGTTTAGATTCCCGACTTCTTGAAGAAGTCGGGAATCTTTTAAATGTTAAACGTGAATTAAGATTACGTTTGCTTTATTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATACAATAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 30433-28868 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000155.1 Nostoc sp. 106C 90_47539_31.1924_211_47539_0.400765687120049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 30432 37 100.0 34 ..................................... TTTGTAATAATTTCCATTCAGGTAATATATCAAA 30361 37 100.0 34 ..................................... CGAGTATGGAATGCACCCAGATCCAGAGGTGCGC 30290 37 100.0 35 ..................................... TGTTAAAGATGGCATTAAATTCCTGCTACGACATT 30218 37 100.0 34 ..................................... TCACTTTTACTGTGGGACGGCTTTACTCTGGTTT 30147 37 100.0 35 ..................................... AGAAAAATACAGGTACCAATGCCGAACAAAACCAA 30075 37 100.0 34 ..................................... TTTATTCGATAGAGCAATTAGAAGCAATTTTTGA 30004 37 100.0 35 ..................................... GGTGAAGGTGTTGGGTTTGGAGCAGGATTTTTATA 29932 37 100.0 33 ..................................... GCTTACATTTGAACCTAACTCTTTGTGGTATTC 29862 37 100.0 43 ..................................... TGATTACCCCAGTGCAACCAAGGTTGGATATCCATTAAACGAG 29782 37 100.0 34 ..................................... TATGGGTATTTAGATGAAGAAGAGGAAGGAGAAA 29711 37 100.0 35 ..................................... AAATCTTATGTGAAGGACTACCAAAGACTACACGG 29639 37 100.0 41 ..................................... CCTTGTTTATTTACAGCTTATCGGATTTGGGTTGTACTAGA 29561 37 100.0 34 ..................................... AAACAATTTTGGCTGCTAATTCCAATCGACGCGG 29490 37 100.0 34 ..................................... GCACTCGATGAAGCTGGAATATTTCTAAATGCTA 29419 37 100.0 36 ..................................... TAACCTCCCTGGCTTTGATGCCAGATGCGATCGCAG 29346 37 100.0 37 ..................................... GGAAATAAAGATAAGTTTAGGAAGCTATTCAATTGGG 29272 37 100.0 37 ..................................... GATTACGAGCAAATTGACACGGGGAACCTTGAACAGA 29198 37 100.0 40 ..................................... TTTTCTTGGTGCGATCGCTCCACAACTGGATTATTGCAAA 29121 37 100.0 35 ..................................... GGGCAATGCCCGCCCAATGCACTGGCTCAACTTAT 29049 37 100.0 36 ..................................... ATGCAGGTGGCAGCTTTGCCCCTCCTGTCAACAAAG 28976 37 100.0 35 ..................................... ATCCGCCAACTTAGTGATGAAGATGCTTTAGAAAT 28904 37 86.5 0 ............C...........T.A......C..T | ========== ====== ====== ====== ===================================== =========================================== ================== 22 37 99.4 36 ATTGCAATTAATTAAAATCCCTATCAGGGATTGAAAC # Left flank : GCTACCACATAGATCGCAACATAAGTCACAGGTGCCCAAATGCCAGACTTTTTCAGCCACAACTGAATTAGATCTGGATTAATTCCTCCTAAAAAATATGCTGTCAGTCCAGTAGCCACCAGGCAAACAAAAAACAATAAGATAAAACTGGTTTTAAAATTCAGCATAAATAAATTGATGCTAGTACAGGGTGGCAGAAATAGAGTACCATCCAAAAACCCCATGACCACAGCTTTTTCGCTTGAGTCTGGCGTCAACCAGTAGGTGTTTGAAAACAAGAGTCAAATTTTGCCCTCCAAAAGCTTACTGGCTATGGTTTTTAACCCGTTTACACTTATTTGGAGGTTGACGCAAACTCTCAAAACCTTACTACATAAGCTTTTGAGCCTGTTTTCCTAATGTCACCCTTGACAACTCAATCCTTGAAAAGCTACTTTTATTGGAGGTTGACGAAACTGTACCTTGAAAACCAAATATATCAACGCTTCCAACTGCGGGCG # Right flank : TATAGAATTATTGGGTTGCCTTTTTATTTGCGTCTTTGCGCCTTTGCGTGAGCTTTTAAATAATATTTTCAGTAACACCAAATTATTTATGCAAGAGTCAATTCATCCCATCAATCAGCAACGCCTAAAATAATGGGTTGTTGCTGAACTACTCGCGGCTTAATACTCCCAATAATGCTGCACTGTTTATATCCCAAAGCTTGAAGTTCGACTAAACATTGATTAGCTTGCGTTTCAGGGATAGCAGCTAATAGACCACCAGATGTTTGTGGGTCGAATAACAAAGGATACTTAAGATGAGACTCAACTGCCATTAGATTATCAATGTAACTTGATGCTTGTAGGTTCTCTAAATGCAGTGAGCTAAAAATTCCTGCTTCTAATGTATTGGTTGCGCCTGCTAACACGGGTATAGCGTCAAGTTGCAATTCCACCGCAACACCAGATGCTTGCACCATTTCTATCAAGTGGCCTAATAAACCAAAGCCTGTCACATCGGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAATTAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 28712-27938 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000219.1 Nostoc sp. 106C 13_125801_30.2689_35_125801_0.422230347930462, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 28711 37 100.0 36 ..................................... TCTAAGGACGGGGAACAATCAGAAGAAACTATAGAA 28638 37 100.0 35 ..................................... TTATTTTATCGAAGGCTTCAATTAAGCGACGTTGA 28566 37 100.0 41 ..................................... ACATTGATTTTTCTTCCTTTACTACTGGAGGAGATGGAAGT 28488 37 100.0 34 ..................................... TTAGAGTACGTCTTCAACAACATTAAATTGCCTA 28417 37 100.0 34 ..................................... GAGCTAAATTTGAAGGACGAAATTTTACAGCGAA 28346 37 100.0 35 ..................................... TGCTTCACCAATGGTATCAGCAATGATTTCGTGTG 28274 37 100.0 42 ..................................... TTCTTTGTATTGATTAAATGAGTAAGAGAGGCAGGAGGCAGA 28195 37 100.0 36 ..................................... TTCTTTGTATTTTTCGTCTGAACTAAACCAGGTGTT 28122 37 100.0 35 ..................................... GCATGGTGCAACGCTTTATCCAATTGCAAGCTAAT 28050 37 100.0 39 ..................................... TAAATATCTTTTTACAGAACTACCACGCAGACTAATAGA 27974 37 94.6 0 ........................C.......A.... | ========== ====== ====== ====== ===================================== ========================================== ================== 11 37 99.5 37 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : ACGCATTAAACTGTCGTTTACTCTTAACTCAACATTGCGCTTAGTGATTTGCACTTTTTTGTCTCCGTGTCATGCCTGCGTTCATTAGCTTCTACACAACTGGGTTAGAATTGAGAACAGCTTGCTGCCCTTAGGAAAAGGAAGCATCCTTTCATTATTTCTCTTTCTCCCAGAAAGGAAGAGTAATTTTGGAACAATTTTATCGAATTGCTAAAATATCCCCTTGTAAAGCTGACGGTAAGATAAGCTAGCGTCAACCAGTAGGTGTTTAAAAAATCAAGAAAAATTTTGCACCTCAAAAGCTTACTCTCTCTGAGTTTGAACGCTTTTACATCAACTTTGAGGTTGACGCAAACTCGCTAACCCTTACTACACAAGCTTTTGGAGTGATTTTCCTCATGACACCCTTGACAACTCAATGCCCGAAAAGCTACTTTGATTGGAGGTTGACGCAACTGCACCTTGAAAACCAAATATATCAATGCTTCCAACTGCGAGCC # Right flank : CAAGTAATAAGTCAAACAAAATTCATCCCATCAATCAGCAACGCCATATCGGTGTTTATCGGTGTTCATCTGTGGTTATTTATTCATAACTGTATCAATCAATCTTTGCAGATATTGCGATCGCTCTGGCTTACATTGGGATTATTTTGCAGGTAATCTTTGATTTGCAAGCATCCGCGCCGCCTCAACTCATCCAAATCTAAATCCCATAGCCTGACTCCAGCATCTTCACTTGCACTAATTAGCGTCTTACCATCAGGGCTGAAACTGATGCTATTGATTTTACCAGGATGTCCCAATAGGGTTTTTAGTAAAGTGCCTAGTTTACCGCCGTAGGCATCGCTAATATTCCACAGTTTAATCGTACTATCAGCGCTGCCAGAAGCTAATATCTGGCTATTTGGCAGAAAACTCAAACTATTTACGCCACCAGTATGTCCTGCAAGGGTACTGATTAAAGTTCCGTCGGCGACATTCCAAAGTTTGATAGTATTGTCCAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 123960-124216 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000048.1 Nostoc sp. 106C 16_124273_29.6445_41_124273_0.412937645345328, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 123960 37 100.0 41 ..................................... CCAATAGATAATAAAATTTCCTATTTCTTCGTCTATTTTCA 124038 37 100.0 35 ..................................... TCTCCAAACCGCGTGCTGAAGATTCGATATGTAAT 124110 37 100.0 33 ..................................... ATCGATTAGAGCCATTTTTATCCTTGGAGTAGG 124180 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 4 37 100.0 40 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : GACAAAGTAATCATTGCGGTCTGACCAAGCTTGTTGCAACGACCGAATTAAAACATTCATCCCAATGCGGTGGCGATTACTTTCCAAAGGTTCTCCGTCATCAAATATTAAATCTGTTGGTGGTGGGGTAGGTTCCCAGTCTGGGACAGGAGGCGCTGGGGAACTCTGGTTTGGAGTAATGTTAGTTGTCATAGCGTAACCTGATACATTTACACGATATTTGTCATCTGTCCTTTGTCCTTAGAGTCTGGCGTCAACCAGTAGGTGTTTGAAAACAAGAGTCAAATTTTGCGTCCCAAAAGCTTACTCTTGGCGGTTTTGAACCCTTTTCTACAGAGTTAGAGATTGACGCAAACTCCCTAACCTTTTCTACACAAGCTTTTGAGCTTATTTTACTCATGTCACCCTTGACAACTCAATGCCCCAAACGTTAATTTGATTGCAGGTTGACGCAACTGTACCTTGAAAACCAAATATATCAATGCTTTCAACTCCGGGCG # Right flank : TTGGGGTGCATCCCAGTTTTTATTCTCCTGAAATAGATAAATAAATCATGAGAAATT # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 40856-40666 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000137.1 Nostoc sp. 106C 108_41045_31.5929_251_41045_0.42139115604824, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 40855 36 100.0 43 .................................... CCGATATTTGGCTTTAATACTCAGCAACCATTGGTTGATTTGG 40776 36 100.0 39 .................................... GTACACATAAAGGATATAGATATATGCTATCTGACTAAA 40701 36 97.2 0 ........C........................... | ========== ====== ====== ====== ==================================== =========================================== ================== 3 36 99.1 42 GTTTCAACTACCATTCCGGCTAGGGGTGGGTTGAAA # Left flank : ATTTTACATTCGCTTATCTTAGTGCCATTCGGTTTCGTTCCTCAACCCAACCTACGCCTAAATTTATAAAAGTCCGGCATAATAAGGGTTGTAGATTTTTATCTCGCGAGAGTGATTAAAGAGCGATAATCCTGTTCAATCACGTCCGTTCAAAGAAGTTCGCCCCCTGTTTGCGCAGAGGGCATTTTT # Right flank : GTTCATTACTGGGTTGACCTATTCCTTCTACATCCCAAGGTTTCAACAACCATTCCAGCTAGGTCGATTAAGAGGAATATTTGAAGCATTCAAATTTTTTTGAGAGGGTTGAAAGGCGCACTTCGTTCGGGAATATCCCAACATTTGTGAGTATATTAGAGATGTAGTGGAGTCAACCTCACCTAAAATCTCGACGACATTTAAATCGTTAATGACGACAATAATCTGTTAACGACGACAATGAATTAGTTAATCGACATGTACAATCGGGATGACTGGATTCGAACCAGCGGCCCCTTCGTCCCGAACGAAGTGCGCTACCAAGCTGCGCTACATCCCGCCGAAAAACGGCACTATATATCCAAAATATCACACCAAATGATAAAGTACAAAACTATATTTCATATCTATAGATATATAGATTACTTTTATCAGGGCGTTGCTTGCTAGGATTAGATTTGTATAACTTCATTAACAAAAGCGGATTGTGACTGTTAAAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACTACCATTCCGGCTAGGGGTGGGTTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 189190-191311 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000089.1 Nostoc sp. 106C 1_236315_29.1223_1_236315_0.418792713115968, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 189190 37 100.0 33 ..................................... TTACGTATACGGCAAGTACACCTGGAACAAAGA 189260 37 100.0 33 ..................................... TAATGGCGAAGTTGTAAGGCATGGCGATTTTTA 189330 37 100.0 33 ..................................... AACCAGATGGCATCACTAAAAGATATCTTCCCC 189400 37 100.0 32 ..................................... AGGAGGTAATCCGCAAACCACGCACCCCCAAC 189469 37 100.0 34 ..................................... ACGAATTTAATTGACCCCAAATACCCAAAGACAA 189540 37 100.0 33 ..................................... TATTACAATCTTTACCATGCTCTTACAATAGCA 189610 37 100.0 33 ..................................... CATGCTCAAGCCATTTACACTGGTGTAAAAACT 189680 37 100.0 33 ..................................... TTTGTAAGATGCATATTAAAAGCATACGAAGGA 189750 37 100.0 33 ..................................... AGTGTATTGAGAAACAATTGACTCATTCTGACT 189820 37 100.0 34 ..................................... ACGTTTTGGTTTCCGGCTTGCATTGGAATAAGTT 189891 37 100.0 37 ..................................... TGTACCAAGCCAAGCGCAGTAGCACACTCTTCGGCAA 189965 37 100.0 32 ..................................... TATATAATCCGCCAAGTGTGACTGTCACCGAA 190034 37 100.0 33 ..................................... AATAACATTAGTAGTTCCGATGCTCATCAAAAA 190104 37 100.0 35 ..................................... CACTAATAAGGGAACTAACTCCTATAACACACATC 190176 37 100.0 34 ..................................... AGGGCGATCGCGTAGTTCGTATTCCAAGTTTTTG 190247 37 100.0 35 ..................................... ATTACAAGAAGCTGGAGTTAAATCTGTAATCGAAG 190319 37 100.0 35 ..................................... CGAAAGAGTTGTGTGCTGAATTTGAACACAATTGG 190391 37 100.0 41 ..................................... CGGGTTTGGATTTGGCAACTATGCAGATTTCCAATCCCGAA 190469 37 100.0 33 ..................................... ATACTCTTCTGAGCGAGACTGTAACGACAACCC 190539 37 100.0 34 ..................................... GCTCACACAGGTGTCGGCAGGCCCCGGCACTGCC 190610 37 100.0 40 ..................................... AAAAGGTATTAATTCATAGCTTTGGCTACACGGTGGGCGA 190687 37 100.0 33 ..................................... GCGCCAGCGGCGATCGCAACAGACCCAGGCTGA 190757 37 100.0 39 ..................................... AGAGAAATTTTGTCCTAGAGAAATTACTAAGCCTATCTA 190833 37 100.0 35 ..................................... AAGATAGCCATATTGTAAACCTGGAAACCTTTGAA 190905 37 100.0 43 ..................................... ATTAGAAAAATTCGATCTATGTCAATAGTCCGAACTCACAGAA 190985 37 100.0 37 ..................................... AGTTGACCAGCCTCAAGCGACATTGCCCGATCCTTGG 191059 37 100.0 34 ..................................... CAAAACTCAGTCAAAACGCGGATTTCCCTGGCAA 191130 37 100.0 37 ..................................... TGAATAAACAAATACTTGCTGCACGGGCTTCCATAAA 191204 37 100.0 34 ..................................... TCCCACAACCTAACACTATGAATTGTATTAATGG 191275 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 30 37 100.0 35 ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Left flank : TCGATATGCTGTCTCGAATTAGCGATCGCAAAACACCCGCACGTCCCCGATTAGGTTGGCGAACAGCACGTATCACCGTGGGTGAACCAATTTCGGTTACAGAACGCTGGGTAAATTCTCAAAGTGATCGCCAAGCATCTCGCCAAGCTGCAAGCCAGTTAACACAAGATTTGAAAATTGCTTTAGAGCAGTTAATAGGTAGTTGATTTCACTATTAGTTATATTTTCCCAGTGTTTCCCCCTTGAATCTGGCGTCAACCAGTAGGTGTTTGAAAACAATAGTCAAATTTTCCGCCCCAAAAGCCTACTGCCTCTGCTTTTGAACCCTTTTTTACCTCTATTGAGGTTGACGCAAACTCCCTAACCCATGCTCTACAAGCCTTTGGAGCTTTTATCCAATGACACCCTTGACAACTCAATGCCCCAAAAGCTAATTTGATTGGAGGTTGACGAAACTGTACCTTGAAAACCAAATATATCAATGCTTCCAACTGCGAGCC # Right flank : CTTATAGTGTCAAAAAACGAACAAGCTTCTCCACAGCGGTTACAAGACAGGGTAAAGTACAGACAACTGACTTTGAAGTAAGCACAAAAGGAGCGTGTATACAGATGGGGAAGGGTAGGTTAGAAGCATTTAGTGATGGCGTGCTAGCCATCATTATCACTATTATGGTGCTGGAACTGAAGGTGCCGCATGGTGCCGATTTAGCTGCTCTGCGTCCGCTAATTCCAGTATTTGTGAGCTATGTGCTGAGTTTTATTTACATTGGCATCTACTGGAACAACCATCATCACCTACTCCAAGCAGTCCGGCACGTTAATGGACGTATTCTTTGGGCCAATTTACATCTGCTGTTCTGGTTGTCGCTAATTCCCTTCGTCACTGGCTGGATGGGCGAGAACCATTTTACTGCTTGGCCGATAGCTCTTTATGGTACGGTACTGTTGTTCTGTGCGATCGCTTATTTCATCCTAACCCTGGCTTTGGTTGCTCATCACGGCAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAAATCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 18477-17782 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTAW01000122.1 Nostoc sp. 106C 210_21159_28.4525_483_21159_0.427430407864266, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 18476 35 97.1 42 T.................................. CAACTCGTGAATGGTTATGCCAATCATGAACATCATGACATA 18399 35 94.3 37 ........T...........G.............. AAAGGACTGAAACATACATTTCCATCCTAAATGCAAT 18327 35 100.0 34 ................................... ACTTTGGGCCAATCAACCCAAATGAGCGGCGAAA 18258 35 100.0 41 ................................... TTATACTAATTCCGTTCTCGTTTCCCTCCAATCCTACTATA 18182 35 100.0 37 ................................... ACTACTCCTTAGTCTTTTTAGTTTCCAAATTCCTAAC 18110 35 100.0 37 ................................... TTGCTGAAACACCTTCTCAAGTAGGTGCATCCATCAA 18038 35 100.0 40 ................................... AACATGGCTGCTAGAGATCAAATCAATGCAGGGAGACAAA 17963 35 100.0 40 ................................... TACTGCGGTACAAACTCTGCCCACAGAAACATGGCTGCTA 17888 35 100.0 37 ................................... ACAATAGCTGGCTCAGGTGTCTTTAACCTGCTTGCCG 17816 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================== ================== 10 35 99.1 38 GTTTCCATCCCCGTGAGGGGTAAGTGATTTAAAAC # Left flank : GATCTAACCACTGCATGAGAAATTCACGGCGGTTAGGCGAAACCAATAATAAAACTGCATCCTCTAAAATGTAGGCAGTCACCAAGTCAATCGTGCGGGCGGTGGATGTCACCATCACAGTGTCGCAGCCTTGCCCAGGCTTGAGACTTTGGAAGTCATTAGTACTTTGGTTGTGTAAAAAGCGGAGGCGCTCATCATCAGAAACACGGATGCGTCCCCAGTGAGAGCGATCGCATACAGCAACTCCTTCCTTTACCGCTTGGATAGCTGCTGCGTCTTTAGCGTCAATTGCAGATGTTGGCATGGTAATGAAGAGTTGCTTAGTTTCAATGTTGTCGCATTGGAAATCTTAGCAAATTATCTTTTACTGGTTCAAGTTTTATTGGGTATTGGGCATGGGGCATTGGGCATCGCAGCTACCATCTCGTCTGCTGAAAAAATACTGCCCTTATCATTCATCACTATTGTTAAATGCGATCGTATCACTAAGTCTTCTCATT # Right flank : CCAACCTTTACAGAAGGCTTACCAAATAAGGCTTACAGAACTGCAAAACTGAGGGGGGTCTATTTTACCTGTCAACAGAACATCATTATTGACAATTACTCTAGTCTTCAAGTAACTCAAACCCTTATACAGTAAGCTATCTGAGGGGGTCTACGAAATAATAAGTATTTGGGCTTTTGGCAGACCCCCTCAGGTTACATTTCTTAACAAAATGGTTTCAGGAAACTAACCATTTAAGTTATGGGTAAAAAATATGTACTTATGAAATTTTCAAGGTGCAAGTGTTGGTATAAAGAATATCATAGCAACCTAGACAATACAATCTTTTTTAAAGCAGCGATTTGCTGTAATTCTTTCAGGCTGATTCATCATAAAACAGCCCTGCTTTGTCTCGCCTGTACTTCATTTATGGTTTGATTTGAAAGATATCGACGTTTTCCAATATACCTATATAGAGTTCTAGAATTATTATGATGCCGAAGGTTGCACCTGCTGTTGTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCGTGAGGGGTAAGTGATTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //