Array 1 8632-10916 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFJL01000018.1 Klebsiella pneumoniae strain 071J1 CEPHYTEN112_S48_R1.fastq_(paired)_contig_18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 8632 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 8693 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 8754 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 8815 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 8876 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 8937 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 8998 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 9059 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 9120 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 9181 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 9242 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 9303 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 9364 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 9425 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 9486 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 9547 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 9608 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 9670 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 9731 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 9792 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 9853 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 9914 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 9976 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 10037 29 100.0 32 ............................. AGGGTTTCGATTTTATCGGGATAGAAATGAAT 10098 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 10159 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 10220 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 10281 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 10342 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 10403 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 10464 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 10525 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 10586 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 10647 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 10708 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 10769 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 10830 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 10888 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACTGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //