Array 1 981690-984160 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP057258.1 Citrobacter freundii strain RHB31-C16 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 981690 29 100.0 32 ............................. CTGGTAATTCTGGACTGCATGACGCTGATTGA 981751 29 100.0 32 ............................. GCTGCTCAATCTCTATATGCTGGTCTGATTTT 981812 29 100.0 32 ............................. ATATCGGGGACATTATCGCGGTAGCCACAAAA 981873 29 100.0 32 ............................. CACACCACGATTAAAAATACCCACCCCCACCA 981934 29 93.1 32 ...C........................T TGGATGCCAGCAATAAAATTGTTGGTTTTGAC 981995 29 100.0 32 ............................. TCAGTGAGCGAAGCGCGGGACTTCATGCGCAA 982056 29 100.0 32 ............................. GTTAGCGCACCAATGAGCGCATCACAGCTACG 982117 29 100.0 32 ............................. AGCGTCATCAGGTACTTCGAACGGGTTGCGGG 982178 29 100.0 32 ............................. CGGTATTACCGGGTATTTTGTGCACCCGGCAA 982239 29 100.0 32 ............................. TGCCGGGGCGACGACCAACAGAGCGGAGACTA 982300 29 100.0 33 ............................. GGTTACGGGAAGTGCAATCCGTGAACATGGCAG 982362 29 100.0 32 ............................. TCCATACCGTTGGGTGCGCGTAACGATACGTC 982423 29 100.0 32 ............................. CGATGATGATGAGAAAGATAAACAGCAACAGC 982484 29 100.0 32 ............................. TCTACGCCAGCAGGCGCAAGAGGCGGCATTGA 982545 29 100.0 32 ............................. TTTTTTGCGCCTGCGCTTCGCGTGCTGCTACC 982606 29 100.0 32 ............................. CGTTTGAAAGCACCTACGGCACAGAGTTAGAG 982667 29 100.0 32 ............................. GAGGAAAGTCTTCGCCAGCAGGCGCAAGAGTC 982728 29 100.0 32 ............................. GAGTTAGACGTGAGAACAGCAGAGGGGTGTTT 982789 29 100.0 32 ............................. CAGCGGCGCACCGGGCGACCAGAGCCAAGGCA 982850 29 100.0 32 ............................. TGGGGGCGGGTACGGCTGGGGCCTCATCCGGC 982911 29 100.0 32 ............................. GATTTACTAGGAATCAAAGCAGATGAACAGAA 982972 29 100.0 32 ............................. GGGTACAACTACGTTTTCACCGGGTCGGATAT 983033 29 100.0 32 ............................. TGTGGCAGTGACGGCAACACCAGAACAGGGCG 983094 29 100.0 32 ............................. ATAACGAGCCGATAGAGCGCATTGTTGATATT 983155 29 100.0 32 ............................. AATTTATTTTACGGCACGACGCAGAGCGTCCA 983216 29 100.0 32 ............................. CGTCCACCAGCCGCAACAGCTTATCTGTTTCT 983277 29 100.0 32 ............................. GCCCCGTCAATCTCCAGCTCAACCGCCGCTGA 983338 29 100.0 32 ............................. CCGGTTGCCACGATTCCTGCTCAAGTGGTTCT 983399 29 100.0 32 ............................. CTACCTGTTTGTCCAGGTTGACTGCGAACAGG 983460 29 100.0 32 ............................. ATGTGCTGCATAACGGCATACCTCCCCACGTC 983521 29 100.0 32 ............................. AACAGCAATCACCTGAACCTGCCGGATCCGGC 983582 29 100.0 32 ............................. GAGTTGCACGGGGAGAACACGCTTGCGGCAAT 983643 29 100.0 32 ............................. TATGTTCAGCGCAAAGGCTGGACCTAAAAATC 983704 29 100.0 32 ............................. GTCAGGTAAGGGCGTATCCAGACCTGATTCAG 983765 29 100.0 32 ............................. CCAACAGCTGAACGCACAAAGGCAATTGGTGA 983826 29 100.0 32 ............................. CCCCGTAAGGGGCTTTGTTTTATCGGCGTGAT 983887 29 100.0 32 ............................. CTGATTGTAGGCCGCTATACCGCCAGAGTGTT 983948 29 96.6 32 ..........T.................. GGTGTGGTGAGTAAACAGAGTGCGCTTTTTGT 984009 29 96.6 32 ........A.................... GCCGTGCCGGTGATGCGCTGGATAGGTGAGCG 984070 29 100.0 32 ............................. CAACAGCCCGATAGAAACGATGGAATCAGCCA 984131 29 96.6 0 ...........................A. | A [984151] ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.6 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTGCTGGCAGCCGGTGAGATCGAACCGCCACAGCCCGCGCCAGATATGCTACCACCCGCTATACCCGAGCCGCAGTTGCTGGGTGATGGCGGACATCGGGGGCATGGCTGATGAGTATGGTGGTGGTTGTGACGGAAAATGTACCGCCGCGTCTGCGAGGGCGTCTTGCGATTTGGTTACTGGAAATTCGAGCCGGTGTGTACGTCGGCGACATTTCAAAACGTGTGCGAGAAATGGTCTGGCAGCAGATTACACAATTGGGTGGTGCTGGAAACGTTGTGATGGCCTGGGCTACGAATACGGAGTCCGGTTTTGAGTTTCAAACCTGGGGTGAGAATCGACGTATTCCGGTGGATTTGGATGGGCTCAGATTGGTTTCCTTTCTTCCTGTTGAAAATCAGTAGGTTGTCTGTTCTTTAATAAAATGGATTTGTTAATTATAAGTTGGTAGGTTGTTGCTTGCTAAAAAATATATTAGAAAACAGTTATATATATTTAGA # Right flank : GCGCAACATTCAATAATTTGATTTCATAAAAACTATGAGTTTTTTTCAGCCTTTGCCAGCTCTTTGACCAGTGGCAGCATAATGCGAACCACGTCGCGACTGCGGTGCTCAATACGGCCGGGTAACGCTTTATCAATATGCTGCTGGTTATCAAGTCGAACGTCGTGCCAGCTGTTGCCTGCAGGGAATGAGGCGGTTTTGGCTCGCTGCTGATAGCCGTCTTTGTTACCCAGATTCCAGTTGGTGGCTTCGACGGAGAGCACGGCAATCCCCGCTTTGTCGAACACCTCCGCATCGTTACAACATCCAGTGCCTTTCGGGTAGTTCTTGTTCAGACCGGGATTAGTGCTGGCGGAGATACCGCGACTGCGTGCAATAGCCAGCGCCCGGTCGCGCGTGAGCTTACGAACCGCTTCAGGTGTTTTTTGCCCGCTGTTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //