Array 1 7651-8296 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIEQ01000060.1 Motiliproteus sp. MSK22-1 scaffold55_cov2730_read212, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 7651 29 100.0 32 ............................. ATGAGCAAACCCTTGCCCCCAGAGCTTTTCGA 7712 29 100.0 32 ............................. CAAACAAAGCCAAACCGCCCTCAAGGTTGTAA 7773 29 100.0 32 ............................. ATCTGGAATTGATCGGGTTGGGGCATGATGAG 7834 29 100.0 32 ............................. TCGCAGCAGAGCTTGATATAACTCTACACGAG 7895 29 100.0 32 ............................. CCGTTATTATGGAAACCACGAATCTGGAGTTT 7956 29 100.0 32 ............................. ATTAGTGGCAACTCGCCGTCCTGACAGTACAT 8017 29 96.6 32 ..................T.......... TTTTTCATGACTAGCTAGCCGCTCTTTGTTGT 8078 29 100.0 32 ............................. TAAGAAATTTCGAATCGCCACCGAGGGCGGTA 8139 29 100.0 32 ............................. AGAGACTATCCCAGCGTGTAGCAGCAATAGCC 8200 29 100.0 33 ............................. CAGGGCTAATCATGATGACTCATAACTCTGCTA 8262 29 100.0 0 ............................. | ACTC,C,A [8284,8289,8291] ========== ====== ====== ====== ============================= ================================= ================== 11 29 99.7 32 GTGTTCCCCACAGGCGTGGGGATGAACCG # Left flank : TCCGCTCATTGAAGAAGTACTGGCCGCGGGTGATATTGAACCACCCTTACCTCCAGAGGATGCTCAGCCACCTGCTATACCAGAGCCAGAATCGGTCGGTGATCAAGGCCATAGGAGTGGATAAATGAGCATGATTACCGTAGTCACTGAAAATGTTCCACCACGATTAAGAGGGCGCCTGGCTATCTGGCTATTAGAGGTTCGCGCCGGAGTCTATATTGGGGATGTATCCCGACGGATTCGAGAAATGATATGGGAGCAGATTACTGAATTGGCCGAAGAAGGTAATGTAGTCATGGCCTGGGCAACCAATACGGAATCAGGGTTTGATTTCCAGACTTATGGTGAAAACCGACGAATCCCAGTTGAGTATGAAGGCCTGAGACTGGTCTCTTTTTTGCCGCAAAAAGACTAATATCCGCTCTTTAAAAAAGTAGAAAATAGTTGGTAGATTTTGTGAAGGTGTTTTTTGTCTTTAAAAACAACTGTATAGTTTTAGA # Right flank : GGAATAAGTATAGATTTATATACCAAGTGTTTTAAAAAATATTAATCCCGAAGATATTTTGGAACATATCGTCTCCAGTCCCACTGCCCCCTAGCTGGCCCTCTGTTCTTTCTGTTATATAAATTTAGTCAGAAATATTATCAAATAGTGCCAAGTATTATCCGGCCCACTCGTCGTACATTATGCCATTAGCGATTAATTCAATAACGTTCTCCTGATTTTCTGCGCTCTCGCTAAATCCAGCCAATGCACCTTCACGGGTAAACGCCCCTGAGCCGAGGGAGTCTAGCCACCATAAATACCCCCCATCATCAGGGCCGCGATCAAGTACATTATTATAGAGAGCCGTCAGGAATTGCTCATCAGAAGGGTTTTCACCATACATATCTTGGAATTCAATACTGTTGATGAAGCCTGCCGCAACTTGCTCTAGAGTATGGCCATTGTCCATAACATCAATCCAATAACCTAACCCCCCTGAGTCAGGAGTTCGATCAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACAGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 109117-109632 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIEQ01000062.1 Motiliproteus sp. MSK22-1 scaffold57_cov2738_read212, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 109117 29 100.0 32 ............................. GAAACACGCTGTAGCGATGGGTGCCGGTGCGA 109178 29 100.0 32 ............................. GAGAGTTTGAATGTCTATATCACCTAGCGACT 109239 29 100.0 32 ............................. ATTATCCCCATGAAACAGAAGTACCTACTACT 109300 29 100.0 32 ............................. CCTAGCAGGGAATTTCTTAATACAACTTGAAT 109361 29 100.0 32 ............................. GTGAATATAAAAAGCACGGACATGATAAGAGT 109422 29 100.0 32 ............................. ATGGGTCGAATTGTCAAAATTAACCCTGATGG 109483 29 100.0 32 ............................. CTCCTTTAGTGATGTTCTTGAGAAATTACCGG 109544 29 100.0 32 ............................. GCTCTGATAGAGGATGCCTTCCAGACCAATAA 109605 28 86.2 0 ......................-.CC..C | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.5 32 GTGTTCCCCACAGACGTGGGGATGAACCG # Left flank : CTCAACATCCAGAGTTTCACGGCAATACTGAGCCAGCACTTCACCCACTCTATTCACACCCGCAGCATTCAGGCTGCCGGAGTTGATATTGGCCAGTTCGATGGTTTTGCTCAGCATTTCTTGATACTGACCATCCAGCCAATCAATCCAAGGGGTGAAATCCGTACTCATGGGGTACCTTCCGTCTCTGTTAGTTATTCTGTCTCTGATAGCTATTCATTATTAAGTAATCAATGATTTTCCGGTAGACAGACACTGTTAATGATGCGACATGGACTTTCAGGTTTCTGACATTGAGATGGAAAGTTGAGTGTTTGAAGCCATTTAGCTGCTTCTGATCGGTACCTTAATAACGACTTTCTTGCAGGCAGAGCCCCAGTTGATCTAGGCTTGATGGCGAATGTCGATCCACATTCCGCCGCTCATTAAAAACGTGGAAAACTGTTGGTAGATTTTGGAAGGCCGTATTTTCTTTTCTAAAACAAATATATAGTTTTAGA # Right flank : CTGAATCTGTCCAGCAGACGATGAAAAAGTGAATTTGTAGTGCTTGAGATTCGTCAGCATTGATTGAATGAGACATACAGAACCAAAAAAAAGTCCAAATGTCTAACCTTGTTAAGGGATCTGCGAATAAGTCTTTTCGGCCTTAGAAAGCTCCCAAAGGGGGGCTATATAGGCCATAGAGAGCACAACGAAAATATTTGCTACAGAGTAGAGCAGTTCAATGAGTGATTTAGATCGAATAAAGGATTTCGTAATAACTCAAAAGGAGAGTGTCAGGTATCCCAAAGGGGCTCGGATTATATGTCCAAACTGTAAGAGACAGATCGCGATAGCCAAACGGGATATATTGAAAAAAGAATCCCGTTTTAATAACGAGCCATGGGATGGAATAGAGCCGGGTGATCTTCCAAATTGTTCAGTATGTGACGTTGGGTATGCGCGTTTTGGAAAAATACATACGGATAAAGGATGGTGCTAATGCTGCTCTTCAGGGAGTCGTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACAGACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 110320-110592 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIEQ01000062.1 Motiliproteus sp. MSK22-1 scaffold57_cov2738_read212, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 110320 29 100.0 32 ............................. CGCTGGTTACGAATGGTGTTCAGTCGCTTCAA 110381 29 100.0 32 ............................. TGACGCTGCCCGTATTTCTCTCTCAAAAAATC 110442 29 100.0 32 ............................. GTTTTTTTGGTTCTTTAATGGAGTTTGGTGTA 110503 29 100.0 32 ............................. GAATGGGGCGCTTGTTCGCGCGCTGCTCTAGA 110564 29 89.7 0 .......................A..GA. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.9 32 GTGTTCCCCACAGATGTGGGGATGAACCG # Left flank : CGAAAATATTTGCTACAGAGTAGAGCAGTTCAATGAGTGATTTAGATCGAATAAAGGATTTCGTAATAACTCAAAAGGAGAGTGTCAGGTATCCCAAAGGGGCTCGGATTATATGTCCAAACTGTAAGAGACAGATCGCGATAGCCAAACGGGATATATTGAAAAAAGAATCCCGTTTTAATAACGAGCCATGGGATGGAATAGAGCCGGGTGATCTTCCAAATTGTTCAGTATGTGACGTTGGGTATGCGCGTTTTGGAAAAATACATACGGATAAAGGATGGTGCTAATGCTGCTCTTCAGGGAGTCGTTGTTGTCATGAAATAGAAGAAGTTAAGTTCTTGCTCAAGAACTGTGCAGGCGCAGGCATAAAGGACCAGGTGGCGCAGAGTGAATTGCGGATGTTAATCGACGCTTTGTTGCTTATTAAAAAGACGGAAACTGTTGGTAGATTTTGGAAGGCTGTATTTTCTTTTCTAAAACAAATATATAGTTTTAGA # Right flank : GATCGTTGACAGTTTTACATGCCCCACCGGTCTGGTGTCTGAGTTGAAAGCGCACCTGAAGAAGCTTGGTGTTCAAGGTTCATCTAAGCAGCTCAATAGGATCTCCAGAGGAATTATTAAAGAACAGCCGGGCCTTAGTAAAAAGAACCCTGTGATTAATAAGGCTGTGATGAATTTTTCGCAGCTTAAGCTAGCGCTGTCGGGGCTGGGCCTTCACCTTTGGGGTGGATCTTCTTCTGGAAAAATATCGGCACAAAGCTGGGAGGCAGAAACTTCAGGTGTTAAATCAAGGGCAGATAATGTTCCAGACCCTTATCCAAAAGCGCTAATAGATCAATTAGCCTCGCGGCCCAGTAAGTCGGGTTCCTTGGTAATTCTTTGTCATGATACGACCAGTAGCGAGGTGGCTGAGGTTATAAGAGATATTAAAGCAATAGAAAAAATGGCCACTCAAAAGAACTGCAAGATTGTTTATCATACTATGTCAATTTTATATAAAG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACAGATGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.60,-12.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //