Array 1 62586-63633 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTAL01000004.1 Pseudomonas aeruginosa strain PA-W34 IPC19_4.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 62586 28 100.0 32 ............................ AACGGACCGATGCCATCGTCGGCACGCTCGTA 62646 28 100.0 32 ............................ TTAAGCCACGCGTCCAGATGGCGCAGGCAAGG 62706 28 100.0 32 ............................ TTTGCCCAGGCGTGCGCGGGATGAACTGGAAC 62766 28 100.0 32 ............................ TGGGGCGGTTTGGTGTTCTTGCGACTCTCTTC 62826 28 100.0 32 ............................ TTCGAACTGCCAGATTTGCTCGCGTGCGTTCT 62886 28 100.0 32 ............................ TTGACCACGGGCGAGACTTACGCCGAAATCAG 62946 28 100.0 32 ............................ TCATGGGCTGGGCGGCGAACGTCCTCGCGCAT 63006 28 100.0 32 ............................ TCTACGTCCGCCAATTCTCTTGGCCCGTTCGC 63066 28 100.0 32 ............................ TGGGTGGCCGACATCGTTGCGTCGAACTCGTA 63126 28 100.0 32 ............................ GCATGCTGTCCGGCCTGTTGATCGGCCCGCTG 63186 28 100.0 32 ............................ GCAACGCCGGCCGAAGACCAGACCATCACCGA 63246 28 100.0 32 ............................ TTCACCGTCACCCAGTCCTGGGTGGCGTAGAC 63306 28 100.0 32 ............................ TTGGCAGCTGTAGCCAGAGCCGGATGCGAAGC 63366 28 100.0 32 ............................ AGAGCGCTCTGGTGGACGGCTGGGTACGACGA 63426 28 100.0 32 ............................ CGTATCAGCGGGCCGCCAATGAAACCGTCGAG 63486 28 100.0 32 ............................ AAGAAGATGAACCGCGACGACCACCGATAGGA 63546 28 100.0 32 ............................ AACGCCCAGCGCCAGCGGGAGAAACGCCAGCG 63606 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCTCATCACAGGACCTTTTGCCCTCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCTTCTAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACACCCTTATAAATCAGTAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCAGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //