Array 1 65632-63772 **** Predicted by CRISPRDetect 2.4 *** >NZ_NKOS01000002.1 Escherichia coli strain MOD1-EC1667 MOD1-EC1667_2_length_318695_cov_37.127, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 65631 29 96.6 32 ............................T AATGCAGTACGCGCCGGATCCGGTGTTACGTC 65570 29 100.0 32 ............................. CATCCGTTCAAATTCCATCAGATAGCAAACCA 65509 29 100.0 32 ............................. TATTGTTGACTGCTACGAATACGCAGACGAGC 65448 29 100.0 32 ............................. GCGACGATACCTGTGCGAGCTGAATAAAATAA 65387 29 100.0 32 ............................. CTGCGCGACCAACGGGAACAGGGCAAATGTGA 65326 29 100.0 32 ............................. CGGAACAACAGGTGCAACTCAGGGCACAGGAA 65265 29 100.0 32 ............................. TAATCATTTGGGGCCCCATTAATTAAAAGGAT 65204 29 100.0 32 ............................. GCGCTCACATTTAGCGCCAGAGCCAGGCGGCG 65143 29 100.0 32 ............................. AATTCGGAATCACATTAAAAGGGAACCCGATA 65082 29 100.0 33 ............................. GTTTGAAGGGCGTTTGGAGGAACCCGCGCGTGC 65020 29 100.0 32 ............................. GAATACCGATTCATAACGGCGGAAATGTGGAT 64959 29 100.0 32 ............................. TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC 64898 29 100.0 32 ............................. TTCTCCAATCAGCAGTGCCCATCTGATATGCA 64837 29 100.0 32 ............................. TCAGGGGAATTGCGATATTCAGGCAGCGTAAC 64776 29 100.0 32 ............................. ATCGCTGGTCTGCGAAAACGCGCGCCCGAAGA 64715 29 100.0 32 ............................. GCCCAGAATCTCTTTTAGCGCAACGATATTCC 64654 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 64593 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 64532 29 100.0 32 ............................. GAATATCGGGTGCCAGCCTGGACGCTGGCCGA 64471 29 100.0 32 ............................. ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA 64410 29 100.0 32 ............................. GCAAACAGCTAACCACCGCCGGGGCGGTTTCC 64349 29 100.0 32 ............................. CGATGATGTAATAATTAGAGCAGAATCCAGTT 64288 29 100.0 32 ............................. CAAAATTTAAAATCATTTAAGCTTGTAAAACC 64227 29 100.0 32 ............................. GGTACACGGATATTCTGTCTAAAAGTTAACTA 64166 29 100.0 32 ............................. ACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 64105 29 100.0 32 ............................. AGGTTGACGTTGATTTTGTTCGTTATGTTGCC 64044 29 100.0 32 ............................. GCGTCTCGAGCGCGGGACGATTCAAAACCAGC 63983 29 100.0 32 ............................. CCAAAGAAGAACAACGAGCCAACTGGTTTCAG 63922 29 100.0 32 ............................. GCAATTTGTTGTCCGCGATCCGGTACGCGCGT 63861 29 100.0 32 ............................. CGGCTATGGAATTTATGGAGAAGTTTGGTTTT 63800 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //