Array 1 5604-6085 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAU01000016.1 Anaerostipes hadrus strain 2789STDY5834908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 5604 30 100.0 35 .............................. CGGTAAATACATTAGCAAACACATCTCCGGCAGCA 5669 30 100.0 34 .............................. GAACATTTCCACGATGACGGGTCAAGATAATCAC 5733 30 100.0 37 .............................. CTGTAATAAAAACAGTGGACGAGCCGTGAAGAGATAC 5800 30 100.0 35 .............................. AGAGAGTTTTTACATCCCCTTATCATTTTTTTCAT 5865 30 100.0 36 .............................. TATTTAAGCTGATATTAATATAGGAAGAAGGTTTTG 5931 30 96.7 35 .........C.................... AGCAAGATGCCAAATGCCAAGAAATTTAAGAAATG 5996 30 96.7 30 ......................C....... AAATTCTTACTAAAATTAGGATTTTTATGT 6056 30 76.7 0 .........C.....AT........TTTT. | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 96.3 35 GTTGAATAATAACATGGGATGTATTGAAAT # Left flank : AAACAGAGGACTGGTAGATCGAACAGGATTAGCTGTTTTAAGACACACAAGAACAGCTTCTACATTAACAGAATTTGGATTTATCACAAACAAAGCAGAAGCAACATCTATGAAAGCAAACACAGGCAAATATGGAAAAGCAATGTATAATAGTGTTGTAAAAATGTTTCAAACAAATCCATCAAAAAGATAAAGATCATAAAAGAGGAACAGGTATAAATGCCAGTTCTTCTTTTTTTTGACCATTTTGGTGAACTCAACGATATGGTCGGTTGTATTTTTTATATGTGATTTTTTTTCTGAAGGAAATCTCTCATATTTATAATGGCAGGAAAATTCTTACCAAGTGATTTTTTGAAAAAGTCTGCCAAATGGCGTAAATACGTGACTTCTTGCAAATAGCTGATTATCAATGGAATAGTTGGTAAAACATGAAAGAAATGGCTTAAAATCGATATTTATATAGATCAGTAAGATGTAAGAATGACGATTTTTCATTG # Right flank : TATATGTGAAAATTCTTTCTTAAAATTTCTCTCATATTTACAATGTAAGAAAAAAATAACGCAGATAAAAAAGGAGAGTATATATGTTACAAGATAATATCATTTTAAAAAAAGTAATCGTTCATGTGGCTCAGCCATCCATTGGAAAATATAAAGCATCTGAAGAATGTATTGACTTGGGAACGGATTTTACAGAATTTTTAAAGAAGCAGATAGAAAAGATGACAGAATCTGATGACGCGGTAAAGATCGATCTGAATCATGCTGCAATTACCATTGATCCGGATGATTTTGAAAAAAATACAGCCAAATTAGGAGAAGAACTCTATGATATCTGTTGTGATAGTGTCAAAATCCCAGATGCAGATTTAGTATTCCTTACCTTTAATAGTGAGGGAGCTGATTATTTTGGAATGTTGAAAATGGATTATAAACCATTCTATGGACATCAGAAAGGAAGCACAGAGGTTGTCACAAAACAGGTTATGACTAATACATGT # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATAATAACATGGGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 6841-7074 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAU01000006.1 Anaerostipes hadrus strain 2789STDY5834908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ============================ ================== 6841 38 100.0 27 ...................................... CTTTTAAGAGATAAGCACGGTTTTCGG 6906 38 100.0 28 ...................................... CGATTCTGTGATACAATTCAAATGTATT 6972 38 100.0 28 ...................................... ATCTTTTTCTCGTAATTTTCTTTTCAAT 7038 37 78.9 0 ......................T.C.-A...C..TTG. | ========== ====== ====== ====== ====================================== ============================ ================== 4 38 94.7 28 CCTTAAGACATGTCATGTTTTACATAGTTCTAAAACCT # Left flank : AATGAACATTCATAACGTCTTTCTTTTTCAATCGTATCAAGAATCATTAATTTGTGTCCACATTTTTCAGATTCCTCTTTGATAATGTCACGGCTTAATCGTCCGACTTTTTCAATACGTCGAACTTCATGAACTTCTAATTTTTCTAAATATCCAAGGATGTATTCTTTAAACTTGATTGTTCTTGTAATCTTCATATAAATTTCTCGCTTTCTTAATTCGTATTTACTGGAACAAAATCATCCATACATTGCCATTTCCAATGATTATCTTCGTAAATTAAGAATCTTGTCAGATATTCATCCCCGACAGCATATACGGTATATTTTTTTCCAGTTTCTTTATTTTTTACTTGAAACATCTATTTTCTCCATTGATCATATAAGGTCATATATGATTAGAAATATTATATTTTCTTCAATAACTACTACTAGCAGCTCTCGTCTAAACGAATTTGTTCGATAATTTCTTATTTTCACATACTATGTAAATAATTTGAC # Right flank : TTTGATATGATTATGAATCTTTCAAATAAATATAAAATTTATTTTTCACCCATATGAGAATAAATAACTTTATTTCTAAGCCCTAAAGGGTCCTCCGCAATGATTGAAAAATCCGCTTTTGTAACATTACTTGACATAGCAATCATTCCTGTGTGTTTGCTGCCACCAATCAATGTAAGGTCTGCCTGCATTGGAGAACATACAAAAAGCTTTTTAATCTCAGTCAATAATACACACTGATCTTCTGTCTTGAGTTCCATAAACTGTTCTTTTTCGTTGTGAATTAATTCAGCCTGATTATTCTTACGATTTTTATAAACACCATTCTCTAATTTATCTAAATAAAAATCATAAAGCTGTTCTAATTCCTGAATATGGAATTCATTTTGATAAACCCTTGCTTTCTTATCAATGGCTCTGCGTTTCATATATCCAGAAATCTTGTTTGCTGTTTTTGTCTGCCAGTCATCCATGATCAATTCCACTGCATTTGTAAGGAT # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.04, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAAGACATGTCATGTTTTACATAGTTCTAAAACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.90,-2.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 74316-74681 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAU01000006.1 Anaerostipes hadrus strain 2789STDY5834908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 74316 36 100.0 30 .................................... TGGATTGACGTATATGACAAATTGGAAATG 74382 36 100.0 30 .................................... CCATGGCGAAAATTAAGAAAAAAAGACGAA 74448 36 100.0 30 .................................... TTGGGTTCAATTTTGTTCCATAATTTGTTA 74514 36 100.0 30 .................................... AAAAGAGGAAATATCGAGATGTCACATTTT 74580 36 100.0 30 .................................... TGATAATCATAATCCATGAACGATAACAGC 74646 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 CCTTTGGAATCATCTGATTTCACACAGTTCTAAAAC # Left flank : GATCAACTGTTACATCTTTCTTTTTTAAGAATCTTCCGCAGTATGCACATATATAATAATCTTTGAAGATTGGACGATTTTTATCAAAAAACTTCTTTCGGTAATCTCCTGAACGAAGATAACTGTTTGGATAACTCTGGTATTTTGTCCGATAAGATTCAAGTAATGTTTTCATTGTTTCAATCTCATTTTCATCATCCAGTTGTATCACATATTTTCCTCTTACATGAGAAAAACCTAAAGAAGTTAAATGCTGTTTGTAAAAGTTTCTTCTATTTAAAAGCTTTCGATTTCCTTTTGGAATCACGTCTTTTTCTAAAACTTCAATGATCAAGTTTACACCCTCTTTTCGATTCCCCCTCTTTTCGATATTTTTTATTTTCATGTTCAATAAAAGAACAAAGTTAAGTCCTTAATTTATAAATTGCTATCGCCGACAGCTTTTACCTTAGTAAACTAATTCGATAAAATTCTTATTTTTACTCACTGTGTAATTTGGC # Right flank : CGACCAAGAGTTTTCTTTGAATCAATGAAAACCTTTGGAATCATCTGATTTTATTTTTCATCATCCTCAACCGATGGTTTTGCTTTTATTCTTTTTCGTAAAACAATAACTGCTGCCAGAATCACAGCAAGTGATACACCACCTGCAGTTGCCATCGCCGGCACACTGTGAATAAATCTGATCCATAGGTTTGTTGTAACATAAATGTTATCCATCGTAATTTCAGATTCATTTCCCGCGGCATCCTTCACAATTACATGAATGCTTTGAGCTTCATCTTTCTGATCCAGAGGAATGTCAATCTTTTCAGGAACTTTTTCATCGTATTCCTTTATCAGATTATCATTGACATAAATTTTCGCACTCTGTAACAGCAAGTTGTCTTTTACAAGAACTGTTGCGGTTCTTCCATCCTGGGCATAAACCTTACCACCTTCAATGTTTGAGATTAAGATGTTTGGTTTTGTTGTATCAACCCCAAAACTGATTGACGCTTTTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTGGAATCATCTGATTTCACACAGTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 17294-17989 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAU01000015.1 Anaerostipes hadrus strain 2789STDY5834908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 17294 36 100.0 30 .................................... CATTCGTCATATTTTACAAGATTGACATTT 17360 36 100.0 30 .................................... TGAATATTACGGTGTGTATCAAGATTTAGA 17426 36 100.0 30 .................................... GATAGTGTTGCAGCTGTAAAATAGATACAC 17492 36 100.0 30 .................................... AAAAAAACACATTTAAAGAAACAGTTATTC 17558 36 100.0 30 .................................... AAAACATCATGTACAAAAGATTTTAACACT 17624 36 100.0 30 .................................... CAATATGATCAGGGTTTAACTTGCATGACA 17690 36 100.0 30 .................................... TCCCTTTCGGCTTATCAAGTATACCCCTTT 17756 36 100.0 31 .................................... TCATCCTTTCGTGATATCTATTGCATCTCTA 17823 36 83.3 30 ..........AA........TG.......G.A.... ATGTCGGGAGACCCAAGAAACTTGATACTA 17889 36 88.9 29 ..........AA.................G.A.... GAATCCCTTTTTCCATCGGTTCCCCTAGG 17954 36 75.0 0 ..........AA.............CAC..AT.TT. | ========== ====== ====== ====== ==================================== =============================== ================== 11 36 95.2 30 GTTTGAGAGTGGTGTAATTTCATATGGTAATCAAAC # Left flank : CAGAATTCCAGAATTCAGAAAAAGCTGATCACATATTTGGCAGAAGAAATTCAAATGACTGAACTATCTGACAAAGTAGTTAAAAATCAGTCGGAATTGTTGCAGGTTGCCGAAGATATCAAAAATCTTTCAGAGTATCCAATTTGTGTAAATGAAAAATATAATATGACAGATATTTTAAAATATCTTGGGGTGAAGCTATCAGAAACGGATGGTACTTTCTGTGAAAAATTAATTGATTACATGAAGATCAGTTATGATTTTTTGAAGATAGATATTTTCTTTGTAGTAGGATGCAAAGGGTATCTGAAAGAAAAAGATTATGAATATTTACAGGAATGGATAAGATATCAGCAAATTACACTAGTATTGATAGAATCTGATGAAGATCGGTTGCCATCTGACGTAAATAAGTATATAATAGATAGAGATAGATGTGTTATACACTAACTCCATATGAAAATACAACATACATGTGTAAGTATGACTCGAAAATTGAG # Right flank : CATAATTAAAAATGATCGCTCAATTTTTTAGCAAATTGGGCGTTTTTTTGTATGTAAAATTTTACATTTTCATATTGCGTTGAAAATCGGTAGAAGACAGATATTTTTTATCTGTCTTTTTTATATGTACAGAGATAGTTTTATTATCATTTTTTCTTCTCAAGAATCATTGCAAAATAAAGAGTAAAAAGAAGCTTTATGTGAAGGTAAAAGCTTACAAAGTGGTTGGAAAAAGGAAGGTGTATTCTTTGAAATAGGAACCTATTTGTTTTTTTCTTAAAGACAGACAAATTATATTGTTTGTCTTTTTTTCAAAATTTTATATGTGAAAAATCTTTTTTCTAATTTTTCTCATATTTATAATAGTAGCAGAAGAGAAAACCGAAAGGAGACGTCATAATGACAGAAGATAATCTATGGAAAGAAGTTTATTCTTCAGTAAATTCATGCGATATAGAACAAGGAATCATTGATATTAAAATCGTTACAAACCAGCTAAA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTGGTGTAATTTCATATGGTAATCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 24288-25337 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAU01000015.1 Anaerostipes hadrus strain 2789STDY5834908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================== ================== 24288 27 100.0 37 ........................... TAAGAAATCTATCAAAAGACAATCGGTGATCTTGATG 24353 27 100.0 38 ........................... TTTCCTTAGATGACAGCGAGGTTTATTACAATCTTAAG 24419 27 100.0 37 ........................... TGTGGTACATTGATTGGATAGCCATTGTCTGAATAAG 24484 27 100.0 37 ........................... TGAAAAACAGCAACTGAGATCTTTGATCTATCTCTGG 24549 27 92.6 37 ............G.A............ TTACTTACTATGGAGAGCACATTTTAATCTAAATAAG 24614 27 92.6 38 .......CG.................. TCGAAGATAAGAAGAGGCGGAAGTATAAGAGAAATGAG 24679 27 92.6 27 ......G.....G.............. TTAAGACGCGGCTAATTCATCGTATAC T [24691] Deletion [24733] 24735 27 81.5 36 ......GC.....TCG........... TTAACATCTATGTGCAATTTTCACGAACATGATCGT 24799 27 92.6 36 .......C....G.............. TTGGAAAAGTGCAAGGCAAAGAAACTTTATTTATGG 24863 27 100.0 37 ........................... TTTTAATTTGCGTATCCCTTCACGTATCGCCGCTGAG 24928 27 88.9 39 .......C..T.G.............. TAACACACTGCAGCTAATTCTTTAAAGATTCCCATTGCG 24995 27 88.9 40 .......C.....T..C.......... TCTTGGATTGGAAGTGAGTGCATAATGCCACCAGAGGTAG 25063 27 100.0 36 ........................... GAACATCTACAATCAAGCAATACACCGGATAACAGT 25127 27 88.9 37 .......C....T........C..... TATTTATTTTGAAGCAAACAACCGTCTGAAAGGAGCG A [25141] 25193 27 88.9 27 .......C....G...C.......... TTATAGTACCTCCATAACAACTATCTA Deletion [25247] 25248 27 96.3 35 ..............A............ TTATAAATCCTTGGCGTAGCGACGTAATAAATCTG 25311 27 88.9 0 .......C...........G......A | ========== ====== ====== ====== =========================== ======================================== ================== 17 27 93.7 36 TGAATAATAACAAGGATGTATTGAAAT # Left flank : AAATTAGCGGATCATATGATTCATAGACGCTGTACTTACATTCCGTATTTAGGAAAGAATGATCATCCTGCGGATATTCATGATATTTCATACGTTGAAATTTCTGAAAACAAAGAACTAGGCTGCATGATCAACAGTTTAAGTCCTTATGATGGAATTAACTTTGATATGTCAAAAGTAACATTTAAATATGAAGAGTTTCTTCCGATCCGTTTGGATCAAGATCTCAATCAGCACGAATTACAGAAATTTATTTTAACAGATGCGATCGCAGAAGACTCAAAAGTAACTGTTTATAAAGCAGAAGATAAAAATATCGTTTTTTGTTAAAAAAGATTTCCCAACCGTATTTTTAAAAAAGTCTGTCAAATGGCGTAAATACGTGGTTTCTTACAAATGGCGGATTTTCAATGGTCTGGTTGGTAAAACATGAAAGAAATGGCTTAAGATCGTTATTTATATAGATCAGTAAGATACAAGAATGACGGTTTTTCGTTGGT # Right flank : AAAAAATAATCGCAAAATTTTACGATTGAATTTGTAATTAAAAACATGCACTAATATATTTTTATATGTGAAATTTATTTTCCTTCTCATATCTCATATTTGTTATGTAAAAACATGACGAATAGAGAAATAAGGAGGATACGAACATGACAAAAGTAGATAATCCAATTAAATTAGAAAGTTTAATCTTAGCAGTCACAGGAATTCTTTTATATCATCTTAGCATGACATCTTTTACATTAACAATGATTTTCTTAATTGCAGGAATCGTAGAATTATTTGATGATTTTACCTCAGGTGAAGATACCGCTTTTTACAGTTTCTTTTTTGTAAGAATCCTGAAATTAAAAGGATTTGACTGTGTTGGCGTTGCAAATGATGAGAATGATACATATTTTTTGTATCAGGATCAGACAAGAAAAAAAATATATTGTTTTAAACAGGAACCAGAAGAATTTGGACCTTATGATAAACGATATGTAGGTATGATTAAAAACCAG # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:0, 3:3, 4:0.69, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.53, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGAATAATAACAAGGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 3 73613-73838 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAU01000015.1 Anaerostipes hadrus strain 2789STDY5834908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 73613 31 100.0 35 ............................... TAATAATAGGCTTTATATCTACAACATCGTAAAAA 73679 31 100.0 34 ............................... TTAATCGCAACTATTAAAGAATTGCAATTAAGAA 73744 31 100.0 33 ............................... AAGAAAAATTTATGAAACGGAATGCTTTAAACA 73808 31 96.8 0 .....................C......... | ========== ====== ====== ====== =============================== =================================== ================== 4 31 99.2 34 GTTAAACAATAACATGAGATGTTTTGAAATA # Left flank : ATAGTATTGTTACGATTACGAATGGGAAGGTGGATGTGTTGGTGAATAAGAAGGATCTGTCTAAGGTTGAGAGGAGTCAGATTGAGGATATTGTGGTTCGGAAAGTGGGGTGCCAGTTGGGGGATGTGGTGATTAGTTCGATTAAGACGGAGGAGTAGGTGAAAGTGCATATGGAATAGATGGTTGGGTTCTCTCTGGATGATGTTCTTGGATGATTTAGAATATTGTTTGGAGAGAATTTAATGTTTATATATGGATTTGTATATTATGGTTGCATATTTGATTGATTGGATTCATAATAGAAAGTGTCAAGAAACATGGGGAAATGAAGTTTTTGATATTTTACCAAGTGATTTTTTGAAAAAGTAGTAAAAATGGCTAGAATACGTTGTTTTTCAAGAAAGGTTAAAATTAGTAAGGGGGTTGGTAAAAATATTGAAAAAGCTTATAAAATCGTTCTTTTTTGTAAAAATCTATTTAAAAATAACGATTTTTCGTTG # Right flank : GCTCTCGCTGTCGTTTCCGTTTCTCGTATTCTTTGGTTAAAGGGAGTATCCCAAAGTTTGTGTAAACCTTCAAACTGATGTAAGATAATATTACTCAGTTTGGAGGTTTTTTTATGGGAAGAAGAAA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACAATAACATGAGATGTTTTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 3145-3959 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAU01000061.1 Anaerostipes hadrus strain 2789STDY5834908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3145 30 100.0 36 .............................. GACATCTTTTACGACACCTGTGAGCTCTTTTGTGAT 3211 30 100.0 34 .............................. ACGCAGTTGATCCGCCGTTTATCGTATGGCTGAA 3275 30 100.0 34 .............................. CGGTAACATCTATCCATCCAGTGTCTGTTGTAAG 3339 30 96.7 36 ........................C..... TTCTTGGGAAGAAACCGACACAGATCGCAAATGCAA 3405 30 100.0 36 .............................. ACTTGATCAGAACAGTATTAATGGACTTGCTTTTTT 3471 30 100.0 37 .............................. GTATTCAGGTAAACCACTTCCTTAGTTTGTCAGACTC 3538 30 100.0 36 .............................. TACAATAGATATGGAATTTTCTATATTAAAATTTTA 3604 30 96.7 35 .......................A...... TACACCAGAGCAGAAAAAAATGATGGCCCTGACAG 3669 30 96.7 36 .......................A...... AAACTAATTTCTGGAGAAGAAGCTACTCTTCTCCTT 3735 30 96.7 36 .......................A...... CTTATATCCTGTCCCATTTCCAATAATTGCGTAACC 3801 30 93.3 35 .................A.....A...... CTGGCGTAGATGCTTATCAATGCGGGCTTCTTTTA 3866 30 96.7 34 .......................A...... GGAATCATGTTGGGAGATAAAAGCGCAGAAGAAG 3930 30 96.7 0 .......................A...... | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 98.0 36 ATTTCAAAACATCTCATGTTATTGTTTAAC # Left flank : TATTGATTCAATAATTTTTTTAATTCATTCTCCCTCTCCTCTGTTAATTCCAAAATTACTACTTTTTTATTAGATTTGTTTTTTTCAACAAATTCTAGTTTCCCTTTTCGATAAATTCCTTTATTTTTTAAAACACTTAGGTAATATAATAATTGCCATTTTGCTGCTTCTACATCAGCATCTGATTTTTTTACCTCTGTTAAATACTCTTTTGTTAATTTATCTAATTTAATATTTTCAATTGCTATTTCACTGTTCGAACTTTGTAATCGTTCTTCATGAATTGCCTTTCCAATTTGTACGATTTCACTATTATCTTCAAGATTCAACCTATTTCCATGTAAATAACACTGTCTTTTACAATGGAAATAATAATTGATTAATGTTCCATTAACTCTCATAGACTCCTCCTTAAAATTAGAAATTAATCAAATGTGCTTATAAATTTATTTTATTGTTTAACTAATGGCGAGAGCGAATTCATCCCCGACCTTAGAGGT # Right flank : CCAACGATTTTACGTCATTTTTTAATGGTCTTTTTAAAAAAACAACGATTTTATGTACCTTTCCATTATTTTTTCCAAGTGCCCCCTCAATTTACTGTTTTTCTAAAAAAGTACATATTTCAGCCATTTCTAACACTTTTTCTGGAAATCACTTGGTAAAATTTTGTACTTTTAAATATCAATAAATACTCCTCCTGATTGTTCCAACAGCTTTTTGTTTAACTTTCCGTTTTCAAAATATTGTTCTCCATCATAGATACATCGAAGTTCTCCTAAAATATCATTATATATTAAATCTGAATTTTTTTTGATTCTATATGTAAAATATTTAAGATTGCTTCGAGCAACCGAAAGTTTTATCTGCTTTTTTGCATATTCCATATCTGAATCTTCCAATATATTTTTGTATTCATTCCAAACTTCTTCGCCATCTAAAACAGTTCCATCTTCTAATTCAAGTCTACGACACAAAACAATATCCATGCTCCAACTATTATCAT # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACATCTCATGTTATTGTTTAAC # Alternate repeat : ATTTCAAAACATCTCATGTTATTATTTAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 12244-10866 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAU01000061.1 Anaerostipes hadrus strain 2789STDY5834908, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================== ================== 12243 30 100.0 35 .............................. TGTTTTTGCTTCTACCGTTTAAAAGATTGCTTATA 12178 30 100.0 36 .............................. AAAACTTTTTTTGCTTCTTGCAAGATATATTGATAA 12112 30 100.0 36 .............................. ATTAAAACTGGATAATCTTTTCCGCAATATTTTTCC 12046 30 100.0 35 .............................. CACCTAAAAAAACTATAAAATACAGAAAGCATTAT 11981 30 100.0 34 .............................. AAGAAAATCGAGATGATCTTAAAGGCGAAATAGG 11917 30 100.0 36 .............................. TGACAACAGCATTATCAGCACTGGCAGATAGCGAAG 11851 30 100.0 35 .............................. CCAGAGACTGGTAATCTAATTTTTCAAGATCTTTG 11786 30 100.0 34 .............................. CAATCAAGCCTACTATTCAAGGCGAAATCAGCTT 11722 30 100.0 33 .............................. AATTTGGGTAAGTAAGTATCAGAATATCGTTAT 11659 30 100.0 34 .............................. CGATTAAGGCAAGCATTGAACAAATACGAATAGA 11595 30 100.0 36 .............................. AAAATTTTCACATAATAAATATGCGATTGGATTTGT 11529 30 96.7 36 ....................A......... TCGTTCATAACGAAGTATACTTTTAATTTCATTAAT 11463 30 96.7 35 ..............A............... ATTGTACATACAGAGATTCCGGATGCAGATTCCTG 11398 30 100.0 34 .............................. GCGGAAACATAATCTCTTGCAAGAAGCATAAGCA 11334 30 100.0 34 .............................. ACGGATGTGTTCCCAATGTTTAAGCTATTAAACA 11270 30 100.0 36 .............................. AAACAATGGCAGAAATGGAGTAAAAGATGGTAAAAA 11204 30 100.0 35 .............................. TTTACTTACCATCATGCAATGCATGACAGTCACAT 11139 30 96.7 34 ..................G........... ATAATTGTATGTCTTTTAGAATGACAACTGATCT 11075 28 86.7 94 ...............A......C.--.... AACATTTAACGAAGGTATAAAATAGTCGGTGCTACATACTTATTTTTATCTAAAAAATAATATTAATCATTATAAAAGAAAAGGTAATTATTAT 10953 29 90.0 28 ...............A.-....A....... TTATACAAGAAAAGGTAATATTTCTTAT A [10952] 10895 30 70.0 0 C......CG.......TA....A..AC..C | ========== ====== ====== ====== ============================== ============================================================================================== ================== 21 30 97.0 38 GTTAAACAATAACATGAGATGTTTTGAAAT # Left flank : TAAGGGCTATGAGTCAAAATTTGACTCATAACCCTCATAACTATTGATTAATCTTATATCAGTTTTTTGTGTTTACACAAAACTTGAAACAGTCTCT # Right flank : AAATCAACCAAAGAAAACAGTGAATGGAGGGATGCTGATGCTGGTATTTGAATACCAATGCAAGCTCAAATTTCTAAAAAGCATAAATCATAAAACAATAGCAGAAAAAATAAATTACTTTTTAGACAGTGTACTTGCAAAAGATCAAGAATTTTTACAATATCATGAAAATAAAGGTTATAAATACTATGTAACAGATGCACCATGGCCAATTGAAAAAGATGGTATTTATAAAGAAGGTAAGGTTTATACTCTAAGAATCAGAACCGTAAAACAAGAATTAGCAGAATTTTTCTCTGAGAAATTATATGCTCATACATCAAAAGAACTTCTAGGAATTGGTGGAAAGTTAAGAATTATTCCTAAAAAGCATATTGAAGAACTTTATTCTATTACACCAATTGTAGTTAAGACGGATGAGGGGTATTGGAGAGGAAACATGACAGTTCCTGAATTTGAAAAAATAATTAAGATTAATCTAATTAAAAAATATAAACAAT # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACAATAACATGAGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 84829-85190 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAU01000010.1 Anaerostipes hadrus strain 2789STDY5834908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 84829 30 93.3 37 C.....G....................... GCCATATAACCACCTACTTAGCCATTACTTCAAAATG ATA [84842] 84899 30 100.0 35 .............................. GATCCCGGGGGCGTTTATCCTTGGATATTTAGAAA 84964 30 100.0 37 .............................. TTATTAAAAACAACACAGACAATACTTCCAGTATTAT 85031 30 100.0 36 .............................. TATATTCCTTTCTACTATCACGCTTATTTTTAAATG 85097 30 100.0 34 .............................. TAATAGCTGCGATTTCAATTATTGAATCAAAATT 85161 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 98.9 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCAAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCTCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATTGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAGTTAAACAACTACTCAACTATTATTATACTTATTTTTAAATTTATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTTTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CCCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGTAACACCTCCTATTTTAGGCGTTTTCGCCTTCTGTCGATCCCCTATATTTTTTGCACTATCATGGGTCGACAGAAACCCCTAATTTTTCAAGTTGATTTTGTTCGACACATTCTATTATGAAACTTATTTGCTAAATATGCAAGTTAAATACACGCATTCATTATATATACTTTTCGAGCAAACACTATACAGTCATATATGCATCAAATATCACCGTCTGAATAATCCAATTTATCGTCATTTTTATAAAAATCATGCCCACGCGAGAAAATTTCCGTGGGCATGACGTGGGCACAGCTATTTTTAGGCTTATTTTCAATCAAAACCACCGGCTTAGCCGGTGGTTTGTACTAGCCCTATAAGGGCTTATTACCGACGCTAAGTCTAAAGACTCAT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //