Array 1 294743-292512 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKO01000012.1 Bacteroides salyersiae strain BIOML-A28 scaffold12_size318023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 294742 35 100.0 34 ................................... AGAGCCCAAATCACACCGATACCGGCACAAATGA 294673 35 100.0 34 ................................... TTATTATGCTTTTGTCCGTCTTTACCGTACAGAG 294604 35 100.0 35 ................................... TAATAGTTTATGTTTGGCAGGGTGACCCCAATCAT 294534 35 100.0 37 ................................... GCATATCCGGGGTCGGAGGAACCAGTTTGTCTACATT 294462 35 100.0 36 ................................... ATTGGGGTGTAGAAAATATCATCCTCTGTGGTGATT 294391 35 100.0 40 ................................... TCCAACGTATCCTCCGATTACCTCAACAGCGAAGTTGCGA 294316 35 100.0 40 ................................... CTTCCCGTTGCTTTTTGGTCAGCCGGTTGAGAATTTTTTT 294241 35 100.0 37 ................................... AAACTATTCCTTTGGGAAGGTTTGGCTTATGCGTAAT 294169 35 100.0 39 ................................... GGTATTTTCTTGCGCATTGATATTTGTTGTTGCAGCAAT 294095 35 100.0 36 ................................... GAGATTTCCAATATCTTACGGGTCGCTTCCTTACCG 294024 35 100.0 34 ................................... AAACAGTATCATTCATAACTTTGGCGTTTATATA 293955 35 100.0 32 ................................... ATTGAAATACGTCAATATAACGGCCGTTGTTT 293888 35 100.0 36 ................................... AAATCCAGACTTTGTGTGCCATTGTCTTCTTGGTTT 293817 35 100.0 36 ................................... AGGAGGAAATATGCATCTCCCTTTGCCTTACTGGTG 293746 35 100.0 33 ................................... GAACTCAGATTTGTAAACGCCCATACGAGCTTT 293678 35 100.0 35 ................................... ATTATCTCATCAGAAAGTCCCTGTAACTCCCATTC 293608 35 100.0 38 ................................... TAAAAGCATTTCCAAACCGTTTTCCGTCTCAATGATTT 293535 35 100.0 39 ................................... TTTAAGGAGACTGAAAGTTTCAAGCTTCAGCCGCAAAGA 293461 35 100.0 34 ................................... TTCTGGGCTTTCAGAATATTGGTGTAACAAGTTG 293392 35 100.0 38 ................................... TTTTGGAACGCTTATAGGGTTCCATTTTTACGTGTTTC 293319 35 100.0 41 ................................... CTTTTTACATTTGCGACTGTTAATTTTGCTTTCATAATCTT 293243 35 100.0 34 ................................... AGAACCGGAGCAAGAAGTCAGAACACTTAAGGCT 293174 35 100.0 37 ................................... TTCCTTCGGAGCAAGGGAACAATTCTTTAACCAATAT 293102 35 100.0 39 ................................... GGCAAATATAGCAAGTTTGGCATTGTCTTTCATGATACC 293028 35 100.0 37 ................................... ATGCTATACCCTGATTCCGATATCCGTTTAAACAACA 292956 35 100.0 35 ................................... GTCGCAGGAAGTACACATTGCACCAAAAACTACTG 292886 35 100.0 37 ................................... GGCGGCGCAGCTGCTATTCCAACCATCTTGTGTACAT 292814 35 100.0 37 ................................... ATCTTTGGGAGTAGGGAGGATTAAGAACATTTTGTCT 292742 35 100.0 37 ................................... ACATTTTTGGATCATTCGGTTCAAGATGCACCGGTTT 292670 35 94.3 35 ...................A............A.. AACTCGATACCAAGAGATGAACTCAAAGCGTCAAA 292600 35 71.4 20 .A....A.....C...T..A..C..AA.C...A.. TGTGTATGTATACTTGTGTG Deletion [292546] 292545 34 80.0 0 ......C.AT..-...TC.A............... | ========== ====== ====== ====== =================================== ========================================= ================== 32 35 98.3 36 ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Left flank : TATGTGGCCAAGTGGTGAGATGAAGTGAACAAAACATGAAAAAAGGCCAAACTCTTGCGAAAAACGATAAAAAGATAATTATCTGATTTATTTGATATTATATTTTTTAGATAAATTGTATTACTTAAATCACATTCGCAACAAAATACATGTTAGCAACAAAGTAAATCATTTGCGAAAATGATTCATTACTATACAAGCGATCTTTGACGTATTGCATTTATAATCAATAATATATTGTATAATACCTCTATACCGTTTTTCGAAAATGAATCTTTTTAAAGAAATTCAAAATCATTTTCGAAAATAGATATTCAATGTAAATATCTTATTTTTAAGCAAATAAGCATATATTAGCCAAACAAATTATTGATTTTCTTAAAAATAATACATACATTTGCGAAAAAGTTATTGGAATATAGCGTATTGTATTAAATAACAATACTTTATGAGAAATATACAAAACAAAGAGTAAAAAATAAATTATTGATAATCAGATT # Right flank : AAGCAACTCTCTAAAATCATTTATATCTCATTATCCCGAATTCAGAAACAATGATACATCATACACCTTTAATTCACTCTAATAATATTACCCCATTTTAACCTCAAAATTTTTCTTTTCCAATACCACATATCCCGCATTTTCATTATATTTACCTCCAAATACGCAACACCAAATGGCAAGAGCAAAAAAGACATTCTGTGTCGTAGCATACGATATTAAAGAAGACCGGAAAAGAGCACGCGTCTCTAAAATTCTGGAAAAATATGGAATAAGAGTCAATTTCAGTGTATTCGAATGTATGTTTACCGATATCCAACTATTACAAGTGCAAGAGAAAATAAAAAAAATATTGGATAAACGCTCCGATACAGTCATATACTATCCGATTTGCGTCAATTGTTATACAAAAATCATATATCAACCGGCACATCGCCAAACGTCCCGCACTATAGAAATTGTATAAAATAAAAAGAAATCATCTGATGAAACCCAAACGA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //