Array 1 35-278 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAFEQZ010000140.1 Staphylococcus sp. GDY8P10P GDY8P10P_contig_142, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	====================================	====================================	==================
        35	    36	  97.2	    33	.................C..................	TCAAATATTTTTTCTTCTTTTATTAAAGTCTCT   	
       104	    36	 100.0	    30	....................................	AAACAGTATCCTTTTCATCTCCTAATTAAT      	
       170	    36	  77.8	    36	T..TAT.G......T..G................G.	AAAGGAATGTCACACAACGTTTTTATTAAAAATAGT	C [177]
       243	    36	  88.9	     0	AT...............G...............G..	|                                   	
==========	======	======	======	====================================	====================================	==================
         4	    36	  91.0	    33	GATCGATAACTACCCCGAAGAACAGGGGACGAGAAC	                                    	       

# Left flank :   ATTTTTATATTGACATTTACAACGGTGTATTATAG
# Right flank :  CCACATCTTAATGATCTCAATTAGCTTGGTTAAAAAGAAATCAATAACCTCCCGTAGAATTGAGAGCAAGTATTAAAAATATATTTGGTTTGATAAAATAATCTGCAAAAAAAGAGGAACAAAAAAATCAAGATTTAAACTGTAATTCATTGTTTTTGCAATTAATCAACATTCAATTTTTAAATAAGCAGAAACAAAAATAACTTTCATACAAATAATTTCTTTGAGATTAAGTTGGAATTAGAAAACTAATACTAAATACAAATAACAGTGAATGGAATGTATATTATTGAGGAATTTGATGCAGTGTAGTGCAATTTCGAGAGCTACTACTTAAGAAAATAAACAATAAGAATTAAATCTGAATCAAGATATAAAAATAAATATTTTTACCATAACTACATTAGTATAATGGATAAGAGAATAAAACATTTATTTAAAATTGCAGTAATCTCAGCATTATCTCTGTTTGGTTTATTTTTAATTTTAAACATAGTTTT

# Questionable array : NO	 Score: 3.60
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATCGATAACTACCCCGAAGAACAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,1] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.80,-3.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.24,0.68   Confidence: HIGH] 

# Array family : III-A [Matched known repeat from this family],   
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