Array 1 144826-143221 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021984.1 Raoultella ornithinolytica strain WP3-W18-ESBL-06 plasmid pWP3-W18-ESBL-06_1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 144825 28 96.6 32 .....-....................... TCCGGATGATGACATTTCGGGTGATAATCATA 144765 28 96.6 33 .....-....................... GGGGCCAGCTCCCGGACGAGAAATGTGACGCCC 144704 28 96.6 32 .....-....................... ATTCCGTTCATAATTTTGTAGCTGCCCGCTAT 144644 29 100.0 32 ............................. TTCTCTCCGCCGGGCAGTGTGATGCCGGAGGG 144583 29 100.0 32 ............................. GCAGCGGCCTGACGATGATCGATATGAACGGC 144522 29 93.1 32 .............A...A........... TGAAATTGACGAGTGGATCAATCAGCGTATTG 144461 28 89.7 32 .....-......TA............... TCACTTTTGCGTCGAGCCAAGTTATTATCTCA 144401 29 93.1 32 ............TG............... TAATTTAGGAAATGAATTCTAAAATTGAATCT 144340 28 93.1 32 .....-.......A............... TGAGGCTGCTGACGGAGAATTGGGACCTGTTC 144280 29 100.0 32 ............................. TAAGCTGATCGTTGCCGTAATGCGAAGCGGGA 144219 29 96.6 32 ...............T............. TGACTTTTGTGAAATTTTTTTCTTAAAAAACT 144158 28 82.8 32 ..........A..AC.T-........... TTAATGTTTTGTTAATTTATAAGTGTGGTGAA 144098 29 93.1 32 .........T...C............... CGTTCGGCTAGGGCGTTGACGGACGCATTTTC 144037 28 86.2 32 ...C.-.......AC.............. CGGTAACGCAAATGTGATCCGATGTCGTCAGG 143977 29 100.0 32 ............................. AACAGTGGGATTTCACCTTTTAGGTTGAGTCA 143916 29 93.1 32 ............TA............... TCACTTTTGCGTCGAGCCAAGTTATTATCTCA 143855 28 93.1 32 .....-.......A............... GCCATGCAACGTCTGAACGTCCGAAACATCCC 143795 29 96.6 32 .............A............... AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 143734 29 96.6 32 .............A............... CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 143673 29 100.0 32 ............................. TCGAAGGCAACCACCAGGAACAATAAAACCCC 143612 29 89.7 32 .A..........TG............... CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 143551 28 89.7 31 .....-.......G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 143492 29 93.1 32 .............A............T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 143431 29 93.1 32 ............TC............... TTACGCATTGTGATCAGGATTCGCTTCAGACG 143370 29 93.1 32 ............TA............... TCGCCCAGTCCAAAGGGGATGATGCAGGATTG 143309 29 100.0 31 ............................. GGCATGAGCGCGAACCACTGCGAGAGTGTGG 143249 28 72.4 0 TGTA.T.......A.........-....A | A [143238] ========== ====== ====== ====== ============================= ================================= ================== 27 29 93.6 32 GTATTCCCCCCGCTTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTACGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTACATTAATCCGCTTTGCAGCCGAGCCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTGAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCGGGTGGATTTTAGTGGTGCTATTTATTATTTTATAATCAACCGGTTATTTTTAGA # Right flank : CATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGCTAGCGTTAAAGGAACATTTAGCCGTGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTATTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACATGATCGGCTTTTCCGTCACATTCATTCAGCTCAGCACCAAAATCACCGCAAACTTCACCTGCATACTGATTTACTTTTTCCAGATGTAACTCACCGAAAAC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCTTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //