Array 1 16244-17393 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYYN01000009.1 Eikenella corrodens strain EI_06 NODE_9_length_63751_cov_52.875695, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 16244 36 100.0 33 .................................... AATACAAATTGGTTTGGCTCGCTAAAGTGGTAA 16313 36 100.0 33 .................................... GCTACAAGGAGCGTTTCAGCTATCGGACGGATA 16382 36 100.0 33 .................................... GCAATCATGCCAGTGTCTTTGCAGTATTGAATC 16451 36 100.0 34 .................................... AATAGTCGCCAAACCAGACTGGTAATCACGATTG 16521 36 100.0 35 .................................... GCAGCCTTATAATGTAGCAATACATTACTGAACTT 16592 36 100.0 34 .................................... GTCAATGCTGCTAAGATTGTAGCTATCCATTCTA 16662 36 100.0 35 .................................... GCATAATAGCCACTTGTTGCACGCTCTTTTGTGGC 16733 36 100.0 33 .................................... CTCTTTGAGCGTTGGCACTTTGCCAGTAGCTTT 16802 36 100.0 34 .................................... ATTTTTGCATGTTCTCTTTCCTTTTCCACTTCGG 16872 36 100.0 34 .................................... TTATGCCGGGCGGCGCAGTCGTTATACAGATGCA 16942 36 100.0 34 .................................... GTCAATAGCGGCTACGAAACCTTCACAAGCCTCA 17012 36 100.0 32 .................................... GAATACCTCGTCATGGTAAAACGCGCCGCTGC 17080 36 100.0 34 .................................... GCGAACAACCCGTCCACCACGTTACTGTTGTCAT 17150 36 100.0 34 .................................... TCCTCCAGCTCGGCGGCGGGCTGCTCGTAGTTAG 17220 36 100.0 33 .................................... ATATCCTGCGGGCTTAATTCACGGCGGCCTTGC 17289 36 100.0 33 .................................... ACAGGTAGCCGTGGGATTTGAGCGGGGTTTTCA 17358 36 86.1 0 ................T.T....T....C....A.. | ========== ====== ====== ====== ==================================== =================================== ================== 17 36 99.2 34 GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Left flank : CATGGCAAGACCGAATGGCGGCGCACACAAACATGACCGTAGGCAATCAAGCACACGATACACTCTATAAAGAATGGAAGGTAGCTCTGCAAACTGCCGCAGAAAGTCCCGATTTCAACGCGGCAGAGAAAGCCGAAATCGCCGCCGAATTTGCAGTCAAAAAAATGAGGTCAAAATACACGAAATGGCTGACCGACAAGCGCGGCAAAGAGCTGAAACCCATCTTGGCGAAGTTGCGCGGCGAATAATAAGCTATTGGCCTTGCAGAAACCCAAAATTTTCAGGTAGCTAAAGCTGTTAAATTGTTGAAAAACGTTGTGAAATTTAAGGTGTGCCGCTATAATCTGTACCACAAGCTTCCGATGGATAGCGAAGTATCTGTCTTTCGACTGCTCTTTTTATGAATATTTGTTAAATAAAGTCTTTGTTGGTTAAGAAAAAAGCTAACTCTTCTTAACTCAATAATAGATTGAAAGTAATTAGATTTTTAAACTGATGCA # Right flank : CTTTTCAGGTAGCCTCAAGTAGGCTACCTGAAAATGTTGGAAGACGTGTCGGTCTATTAGGGATAAACAGCAAAATAGCCTTGATGTAATATCAAGGCTATTTTTGTTTTCGGGCTACCTGAAAGTGGATTTGCGTTTACAGCGTGCCGATGCTGCCTAATATGATGCCTTCGAGCAAGGCTGGTTTGCCCAGCGAATGGATAATGCTGCTGTTGGGCAGGGGATAGAAGCGTAAATTGTCTTGTTTGGCGCTGAGCATGGTGCAAAGTGTGTCAAAACATTGCCGTGCTTGCTCGCGGTTGCCAATGTGTAGAAATACGCTGTTTTGCAGGGGAATGGCGTGCTGGATTAAATAACGGTGTGCTTTTTGCAGGCGGCGTGGGCTGGCGATGTCGTAGGCGATGAGATAGCGCATTTTTATTCCAAAGTGGCGAGCTCGCTTAATTGGATTGCAGGCTGTTGGCTGTAGTGGGCGAGGGTGGCTAAATAGTTGGTACAGA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 22732-22275 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYYN01000009.1 Eikenella corrodens strain EI_06 NODE_9_length_63751_cov_52.875695, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 22731 36 100.0 34 .................................... CTCAAAGCCAACCTTCCCGCCATCGTATTGATGG 22661 36 100.0 33 .................................... GCCACATGCTCGTTAAAATTGTTTTGCATTTTA 22592 36 100.0 34 .................................... CGTACAAATCAGCCTTTGATTTGCGGCGCAGATC 22522 36 100.0 34 .................................... ATAATCCCGGAATAATCCATAGCTTATGGTCAAA 22452 36 100.0 35 .................................... TCTTCAAACAGCATTGCCCATTTGCTGCTATTGGC 22381 36 100.0 34 .................................... CAATCACCGTAACCGATGTCAACTGCTAAAATAG 22311 36 94.4 0 ..............................A...T. | T [22278] ========== ====== ====== ====== ==================================== =================================== ================== 7 36 99.2 34 GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Left flank : AACCAACTGATTTTTTGCGAACTCAAATCCGATTTAAGCTCCCAAAGCAAGCTGGCAGACCCGCTAAGGCAAGTAATCGACCAAAGCCTCAACATGGGCAAAGTACGCCGCGTCCTGATTTTATCGCCCAAAATCCAAAATGATTACCAAAAAGACGCAAGTAAAAAACAACAATGGACAGAATTTGAACGCAACTGTGCCGCCAAAAATATCCAAATCATCATTGCCCGCGACAAAGAGGCTCTAAAAGAGCTGTCGAGTTGACATAAGTGGATGCTTTACATTGTTCAGCCGCAGGAAAATATTAAAAACATTGAGGCCAGCAAAACCCGCGGCTATAATCCCTACTACAAGTTTTCGGATAGATGACAAAAGTCTGTCTTTCGATCGCTCTTTTTAGTAAAGATTTCATTAAATAATGTTTTTGTTGGTTAAGAAATATACTAACTATTCTTAACTATGCAGAAATTTGAAAATAATGGGATTTTTAATTTAGCGCA # Right flank : AAACAGCCTTGATGGTTTGTTCCATCAAGGCTGTTTTTTTACATCGGGCTTTTCTTTCAGGCTACCTGAATAATGCGGTACTGCCCGTTGCCAAATACGGTTTCTTTTCCCAAATGCAACCATTGCCCGATATACAGCATTTGCGAGAAAGCAGGCGAAAGATTGGTCAGTTGCCATGTGCCGATTACGCCGCTGAGTGGGGTGGTTTGCTTTTGGCGGTTGGAAAAACGGTGGTACTCATGCCATGAAAACTGTGGAGGGAAACCCTGCCCGCCGATTTGGGCCGATAGCTCAGCAGTGTTCGTGTGATTATGCCAGTGCAGATGGGCCAGTGTCAGATAACGGCGCAGAAGTTGGCGCAAGAAAATCTCTTGCATAAGTTCGGTTTCGCGCAAAATCTTGCCTTTTTGTTGGATGCGCAGGGGTGTGAGCAGCCGAATATGCACTTGTGTAGGATAGCGTTCAGGCAGCCGAAGACTGTTATTGTGCTGCTCAATAGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACTCATCGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //