Array 1 76672-72682 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKS01000004.1 Porphyromonas macacae JCM 15984, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 76671 30 83.3 36 ....C.....G.G.A.T............. ATTCAGGCTACCTCCCTTGACTGCTATTGGAAGCAA A [76654] 76604 30 93.3 36 ............G.T............... CGGTTTCAGGTCAATGATGCCGGCACGAAATTTCGC 76538 30 100.0 36 .............................. CAACTGTTACCATGCCTTGGTACTTGATTGCACCAA 76472 30 100.0 35 .............................. TATATCGACCATGACGGTAAGGAGATTACGCAAAA 76407 30 100.0 37 .............................. TGAAATTGTTGATTGCGTTTTCAGTCATACAAGTATT 76340 30 100.0 36 .............................. CTTTAAAGGATTTCTTGTAAAATTTCAAGCAATTTA 76274 30 100.0 36 .............................. TCTGAATAAGTGAAGAGAACTTACGATATGTACCAT 76208 30 100.0 35 .............................. GGTAGCAGCGGGAGCTTTGCCCAAATAGGTAGCAG 76143 30 100.0 35 .............................. ATAGAAAGGCAAGTACAATAGTTCCTGCATTTGCT 76078 30 100.0 38 .............................. ACAGATGAGCAGACTCATTTCCGAGTTGTAGCAATCAA 76010 30 100.0 37 .............................. ATTTTAGGGTGGTTGCAAAGCGCCCTATTCCTCGTGT 75943 30 100.0 36 .............................. AAAAGTTAGCTTACCTGTGCCAGAGATACCAACAAG 75877 30 100.0 36 .............................. TAGCGAGGCGTAAGTGTGCAAGTTAACACCTCAGGA 75811 30 100.0 36 .............................. TTTAATGTTGATTTTATGGAACAAAAAAAATCGAAG 75745 30 100.0 37 .............................. GAAGCCCAAAAACGGGGTCAATGTTAAAACTATCACC 75678 30 100.0 36 .............................. GGTTGCCTGGAATGACGTGCAATTCAATATCCTCTT 75612 30 100.0 37 .............................. TATAATTAAGATACGTTCGATAAGATATCGGATACAC 75545 30 100.0 37 .............................. GGGCAAACCAAGCTGTAATGCGTAGTCTTTGTTATCT 75478 30 100.0 36 .............................. ATTATATACATGTCGCACTTTAATATTTTGGTTTGA 75412 30 100.0 37 .............................. GACAACAGGTCATCTTCCCACCTCAACACCCCTACTA 75345 30 100.0 37 .............................. AAAGAGGCAGGTTAACAGCAGGGGGTAAAAGAAAATC 75278 30 100.0 36 .............................. GATTTTACAACAACCACTTCCGGGAGTGTATGATAC 75212 30 100.0 36 .............................. AGCACTAAGAGATGAGTCGTTTGATTACCAAATTTA 75146 30 100.0 36 .............................. AATTGCGATGTCTACGAAGTGCAAAAAACCTGTTTT 75080 30 100.0 36 .............................. AATTGCGATGTCTACGAAGTGCAAAAAACCTGTTTT 75014 30 100.0 34 .............................. AAGTAGTAAAACTTATATTGGATTGTAAAACTTT 74950 30 100.0 36 .............................. GATATCTGAAATTCGCATCAAAACTTGTCCATTCCC 74884 30 100.0 36 .............................. GATATCTGAAATTCGCATCAAAACTTGTCCATTCCC 74818 30 100.0 37 .............................. AAAATGAATTTCAGAGAAAAATTTCTGTCTGTATTAC 74751 30 100.0 35 .............................. TAGGCTACAGGGCGATCCTGGTTCCTGTTCATCAA 74686 30 100.0 37 .............................. AAGACAGGAAAAGAATCCATACGAGTTGGATAAAATT 74619 30 100.0 36 .............................. CGTATTTGTACCAGAATGTTCTTTGATGAGAACTAT 74553 30 100.0 36 .............................. CGTTGATAAACGCAAAAGCCGTGCTTGACGTTGAGG 74487 30 100.0 34 .............................. CGTATACGCGAATTGAAAGATGAGCTTATCGATA 74423 30 100.0 34 .............................. CTGTAACGCCCTGCGTCTCCGTGTCGCCTGCAAT 74359 30 100.0 36 .............................. TGCGCAAGGCTGCAAACTATCCCCGATTGGTACAAG 74293 30 100.0 35 .............................. TCTGGAACGCTGAGGAAAAGCGAGTGGAGAAGATT 74228 30 100.0 36 .............................. GTTTCATTATCTCCCCTCTGCCTGTTAGCAACCATT 74162 30 100.0 37 .............................. CAGAGAACGACATACCGCCCTGTATATCCCGTTTTTC 74095 30 100.0 37 .............................. GTATTGGCTAATATACCCGCTAATTATCCCGAATCAT 74028 30 100.0 34 .............................. TCTTGTAGAATACCCCTCCCTTGTTCTCTCCTCT 73964 30 100.0 36 .............................. AGGCCTATACGTATGCGAATTAGCTATGCGGGTAAT 73898 30 100.0 37 .............................. AACAAGAATTGTGTTGTGTAATACACGAAGCAATTGT 73831 30 100.0 37 .............................. ATCCTACTAATTTTACAGTAGGATTAATTGGTGCTGG 73764 30 100.0 37 .............................. AAGAGGGTGATATTATTCTTAATTTAATTTATTCTGA 73697 30 100.0 35 .............................. TGTCCGCAGAGAGGACTGCTCAAATTGCAAACCTC 73632 30 100.0 36 .............................. TCCAAATAATTATGCCGTTCGCCGTTATATCTATTA 73566 30 100.0 35 .............................. AAAGACGATGGCACGTATGAACGAGATGCTCGACA 73501 30 100.0 37 .............................. GAATATCAAGGCAAGCCTTGTTGCAGAGGGCAAAATC 73434 30 100.0 35 .............................. CTTATAAGCGAGTGTGGAGATTGCTACGAAGTAGG 73369 30 100.0 35 .............................. ATAAATATTGACATGTATATAAATGATGTCAAATT 73304 30 100.0 36 .............................. ATCGAATAGTACCGCATAGAAACTTTCATTTTCAAA 73238 30 100.0 36 .............................. AACGCGTCACGAAGCAGACCCTTAATGCTGTCGACA 73172 30 100.0 35 .............................. AATATTATTTTTACAAGTACTTATGCTATTGCAGG 73107 30 100.0 37 .............................. GGTCACACGTGAAATTTATATCGGAGAAATTAACATC 73040 30 100.0 36 .............................. AAGAAGTTTATCCCAAACATGTTCGGCATATTCCTT 72974 30 100.0 35 .............................. GTTCAAACCCCCCAGATGGGTGATGCTCCTCTGGT 72909 30 100.0 37 .............................. TTAAAGCTCGGGTTGCCGAGGATGGACATACTATCAT 72842 30 100.0 35 .............................. ACGCGAGGTACGCGTTATTTCAATATCGCAACTAT 72777 30 100.0 36 .............................. GCTAAATCCTCAAACATGGGATGTCTCATCCCGCTC 72711 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 61 30 99.6 36 GTTTTAATTCCAATCTGGTACAATTGAAAG # Left flank : CGTTGTCTTTATATTTATCTAAAAACTCTTCTGCACTTGAGAAAGCGATCTGATTGATGTAGCGTTCGACTTCATCCTCCGTCATACCGATACCCTCGTCGCTCACCGTAATGGTCTTTGCTTTCGGGTCGAAGCTCACAGAGACTTTCGGAGTGCCGATATCTCCTTTTACTTCGCCTCTGGTTGCCATGGTTTTAAGTTTTTGCGTGGCATCTACGGCATTGGATATAGCTCACGAAGGAAAATATCATGATCGCTGTAAAGAAACTTCTTGATAATAGGGAATATGTTTTCACTTGAAACCCCGATGTTACCTTGTTTACTCATTGTTTTTGAAAATATTTTAGTTGTTTTTGAAATCTTTTATTACAAACAAAGTGCCACACATGCAAGAGTAAATCTTCAACTGACATTCTGACCGATTAATATCCCAATTAAGCCTAAAAGACAGTTGATACAATTTAAAAAGTTATTCTAATGTCTATATTCACAGCCATCCG # Right flank : CCGCTAAAAACATACTCGAAATTTACGAAAACAAAGGCTTTTCACCAATTATTTGATGATTTTTTTCGTTCTTCAAGTTGTCGATCTCTAATCCTATAAAAAGACTTAGGTTACGACAACATATCTATTACATTGATTATAAAGCATTTCAAAGATCGCCAACATATTTTTATCTTCTTTTAATTATGAAATTGCAGAGATCGACAATAAAGAAGCTAAGCTTTATTCACAAAAACACTGAAGTTGAAGCTCTTTCTCGTCCAATAATTTCTTTCTCTAACCAACGTTCTTGTCTGGAGGAAAATATAATCAGGCTATCTACATCATTATCCATAAAATCTTTTGCCAAGGATTTTAATTCTAACAGTTTCACCTCAGACAGTTCCCCTTCAAAAACGGAATTTTGAATCCAATTAAGATATTTTCTACACAATTTAAGCATTTTTGCCACACGCTTTTCACCAACATCATAAACTAAAATAACATACATTACCAATACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTCCAATCTGGTACAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA //