Array 1 1815-2442 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWFL01000092.1 Vibrio paracholerae strain CISM_300506 NODE_31_length_4661_cov_30.1251_ID_61, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1815 28 100.0 32 ............................ AACGGGCCAGCCCCGCCCTTGGTGCTCTCGGG 1875 28 100.0 32 ............................ ATCCTCTAAATTTTCAACCGTTCCTTTATTAG 1935 28 100.0 32 ............................ TGCACGATACTATCACCAACGCCGATGATTGT 1995 28 100.0 32 ............................ TTTTAGGGCGATAGGGATAAAATTCTCGTATT 2055 28 100.0 32 ............................ TTTCAGGCCGATAGTGAAGTCGTACTCACCCT 2115 28 100.0 32 ............................ TAGCACGCTAGATGATGAGTTGTAATAGCTAA 2175 28 100.0 32 ............................ CGTAGATTTATTAAAAATGGTGATCTTGCTGG 2235 28 100.0 32 ............................ GTTAACTAAATACATAGAAGAGTGAGGGGGGA 2295 28 100.0 32 ............................ AATCCTCAGTGCGTAAAATTTCATCAATCTGC 2355 28 100.0 32 ............................ GTCAGAGTTTCGACATCACGATTGAGTATTTC 2415 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 11 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TAACTAGAGTCTTATATACTCAAGCCCATGTCGGAACGGACTATTTAGTAAGGTTTTTGACCTTTGATATTGCCTTACATGAATTTTTTAAGTCTATCAAAATCAATAGGTTCTCTCCAATTTTCAATGGATATGAAAGCGGAGTGTTCACGGATCTCGGTTTTAGTAAAAAAATATTCTCTGAAATTGATGATCAGGAATTTGAAGAGCTATCACGTATTATTTTAAACACATAACAAACGCTTCAAGAGGGACAGCCAACGCGTGGCATTGTTACTATGCGTTGGTTTTTGTTGTTACGGTGTTATGCGGTAATTTGGTAGTAGCGTTGGCTGCCCCTTAAGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCTAGCAAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : ATATTTATAACTTAGGCATTTGGGATCGGCCAGTTAACAAACGCCTTAAAGGGACTGTCAACGCGTGGCGTTTCCAGTCCCATTGAGCCGCGGTGGTTATGGTTGTTGTGATTGAGTTTAGTGGTAATGCGTTGTCAGCCCCTTAGGCGGGCGTTATATTTCTTTTCAGTTCAACCATCAAAAGGATTCATCATGAACGTGGATAAGGCGAAAAAACGCATATTGAAACGAGTACAAAGAGGTTTCAGAGGTTATCCGCAAATATCATTAGAGTATTTCGGTGAAACGACCGATTTGGCGACCGAAGTAGTCATCACTTTTGTTCCTGAAGAAAATGCCGAACCACAAATTCAGAGATTTACGAGTGACAAAGATGTCCGTGAAGATGAAGCGATTCAATCGGTATTGCTAAAAATCATTGAACGAGCAGAAGCTGCGACTGTTTTAGAGAGCCGAGAAATATCGGTTATTTAATGATTTTTGGCAATGCTCAACGTTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //