Array 1 51648-53074 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTUN01000003.1 Bacteroides sp. AM22-3LB AM22-3LB.Scaf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 51648 47 93.6 30 A.............................A..............G. ATTGGTTACTCCGGTAAATTCTGACGATAC 51725 47 100.0 30 ............................................... CGCTACGCTGTGGGCTTTCCGCTGCAATCC 51802 47 100.0 30 ............................................... TCGGCAGCCTGTCACAATCGGTGGCCTTAA 51879 47 100.0 30 ............................................... CGAAGTAGTCTTCCCAAGTCTGACCCATTT 51956 47 100.0 30 ............................................... TTTGCTGATGGGTGTTCTTTTTGACTCGCC 52033 47 100.0 29 ............................................... CGGGTCTCCAACGATGCCACGTTTCATCT 52109 47 100.0 30 ............................................... GAGAAGGGGTCGCTTTGGTTCTTTGGCGAG 52186 47 100.0 30 ............................................... ACCACCACAACGATTAAGACAGACGAGCCA 52263 47 100.0 29 ............................................... TCTAATATCAATTACACCATTTACTTTAA 52339 47 100.0 29 ............................................... TCAATATCAAATGATAGCATTACTTTACC 52415 47 100.0 30 ............................................... AGTGAAGATTATCTTGAATCTCGTAGCCTA 52492 47 100.0 29 ............................................... TAATAAGGTTGCTTATAATGCCTATAATA 52568 47 100.0 30 ............................................... CAATACTACGAGTAGAAGCGTAGTAGATAA 52645 47 100.0 29 ............................................... ACAAAAGCAGTTCTTTTACGGCTTAGAAT 52721 47 100.0 30 ............................................... GAAGTCCTTTAAAATGGCACCGTATGCGAT 52798 47 100.0 29 ............................................... TGTATAGAATAGCTTGGCAGGGTTCAAGC 52874 47 100.0 30 ............................................... GTAGATGGAAAGCGAATTGTCATTGACCCG 52951 47 100.0 30 ............................................... AACTGTTTTTCATCTGATTCCATACATTTT 53028 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 19 47 99.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAAAACAAC # Left flank : CAGCAAGTACCCAAACCCTGCTCGGTAGCAGCCAGACAGAGATGTTCCACCGCAATAGCTATATCAATATCTGCATGATCTTTATTGTCGGCACGACGATGCCAAGACTCTTCATGGTTTGTGCAAGCCACAATGATACAGGGAGCTGTGGCAAGCCACTCACGCTTATAGCATTGCTGCAACGCCTTTAATGTAGGTTCATCTGTGACTATTTTAAACCGCCACGGTTGGAAATTAACTGCCGAGGGAGCCAAGCGTACACACTCCATGATATACTCCAATTTTTCTATCTCAACCGAACGACCGGCATATTTGCGGGCAGAATAGCGCGCTTTTACTAATTCTAGAAAGTTCATAAGCATTATTATTAGTTTGCAGACAAAAATACTAACTTTGCTAATATATCCCAAGCTTTTTGCAATGAGTATCATTTATCAATTGCTTACGAACTATTTATATTCTCATTTTGTAATTTTCAATCCTATTATTATCAAATTACT # Right flank : CTGAATATATGTTACAAGCTAATTACCAATTAGTTACACATATATTCAGAAATTAAAAACAAAGTTGTTTTCTAATAAGAAATCCCGTTTCAGACGGGATTTCTTATTTTTAAAATAATTCCAATTGCTGTCCTGGAGTAGTTACACCTTGTAGTTTCTTTCCATAAAAAAGTTCAATAGCAGCAAATTGTTTATCAGTGATACACATTATTCCCACTTGTCCATATTCAGGCAAAAAAGATTTAACTCTATTTATATGAACAGTTGCATTCTCGCTACTAGCACAATGACGGACGTAAATTGAAAACTGAAACATTGTAAAGCCATCCTTTTGTAGATTTTTTCTAAAATCAGTATAAGCTTTCTTGTCCTTCTTAGTTTCCGTTGGCAAATCAAATAATACTAGTACCCACATAATCCGATATTCACTAAAACGGTCCATTATCGTTCAGGATAACTAATACGACGAATTTCTCCACAAAAACATTTATATAGAGAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //