Array 1 403357-403797 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNVZ01000004.1 Leptotrichia massiliensis strain Marseille-P3007T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================ ================== 403357 37 100.0 32 ..................................... AAATTGTAAATCTGTCATACCTTCCATTTTTT 403426 37 100.0 30 ..................................... CGGTTTAAAACCGAGATATCAGATCATAAA 403493 37 100.0 30 ..................................... ATATAGATAAAGATATAGATGTGGTAAATT 403560 37 100.0 30 ..................................... TTTCTAATATCGAGGACGATCCAGATTTGT 403627 37 97.3 29 ....................................A TATTGTCTGAAGTTCCAGTCAAACAAAAT 403693 37 100.0 31 ..................................... TTAAAATGAATTTTAAAAATTCCACTTTTAT 403761 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================ ================== 7 37 99.6 30 GATATAGACCACCCCAATATCGAAGGGGACTAAAACT # Left flank : AAAGATGAAGAAGTGATAATTCCGACATTGAGCGTGATGGACTATGAGTATTGAGTATTTTGGTCTGCTTATGTATGATTTTCCTATGCAGACAGATGTTGAGATATTTGAATATAGGACTTTTAGAAAAAAATTGATAGAAAAAGGATATTATCAGCTTCAAAAATCGGTATATATAATGAGGTCGAAAACAAAAGAAAAAATCGAACTGACAGAAAAACAGTTATCAATGCTCGCTCCAGAAAATTCCTCAATTCGTTCCATTATACTGACAGAAGAGCAGTTTCAAAAAATGAAGGTGCTCGCAGGAGAAGTGACAATGGGAGAAAAAATTTCACAAAATAAAATATTAGAATTTTGAAAAATCATAAAATATGGTATAATATAAATGGTAGTTTATATCATTTATTAAGGAGTAATATCAAGATGAAAATATGGAAAACACAGATAAATAGCAAAAATAATAATCAAAATATCCTATCACTAAAAACAAATGATGG # Right flank : TAAAGCTATTTATGAGAAAAATAGAATATTTTCTAAGAATAAAAATGGTACATTTGGTAAATGGATTGAAAAGATGGAAATTCATAAGGACAATACAAACGTAGTAATTTGTAAATATTCCTTATATTTAGAATATGAAAATAAGGATATTGAAAAAATGTCTGATGTAGAAAAAAGAAAGGTTTATTTACTTAGAGAATGAACAAAAAAGTTACATCTTGTTGAAAAGACAAAAAAAGAAATTGTTACGATAAAAGAAGAGCTTGAGTCTTTAAAATAAATAATTTATGAAGGAGGTTTTTATTATGAATTTTATTTCATCTATATTTTCAACATATTTTTCTATTATGGATTTTTCCATAATAACAAAGATAATAATACTAGTTTTTATTATCTTATATGTACGTTCAATCATTAAAATTCTTAAATTTAAGTTTATTGAAATTGTATATGCTTTTATAGGAGGTATAGTTGGATTATTATCAGTATTAATTGTAGGT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAGACCACCCCAATATCGAAGGGGACTAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 1068761-1068384 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNVZ01000005.1 Leptotrichia massiliensis strain Marseille-P3007T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 1068760 36 100.0 33 .................................... TTTAATAATAGAATTTATAAGATTAACTGTCTG 1068691 36 100.0 31 .................................... AATTAAATTCTCATCTTCACTTAACTTTGTT 1068624 36 94.4 32 ........CT.......................... TTTTCTGTTTGTACTATTGAAAAGGCATTATG 1068556 36 94.4 31 ........C............A.............. TAAATGGTGGAAATCCATCGGAAGTTGAAAG 1068489 36 97.2 34 ........C........................... CTAAGCGGTTGCCTTCGAGAGATGTGCCTGTTTC 1068419 36 94.4 0 ........C....................G...... | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 96.7 32 GATATAGATCACCCCAATATCGAAGGGGACTAAAAC # Left flank : ACAGCCAACAGAGCAAGAATTAAAAGATATGGAACTTGGAATGAAAGTTGTAAAACACGTAAAATCAAATGCAATTGTGGTCGTAAAAGATGGAGCGGCAACAGGAGTCGGAACAGGACAGACAAACAGAATCTGGGCAACTCAGCACGCACTTGAACACGCCAAAGGGGACTTGGATTCACTAGAAGGAGCAGTTCTGGCATCAGACGCATTTTTCCCATTCAGAGACTGTGTAGACGAAGCTGCAAAATACGGTATCAAAGCATTAGTACAGCCAGGCGGCTCAATTAGAGACAAAGAATCAATCGAAGCCGCCGATGAACACGGAATGACAATGGTATTTACTGGAATCAGACATTTCAAACATTAAAATTAAACAAATATTTGTTTTTATAGATAAACTGTACTAAAATATATGAAAAGGGGTAATCTATATCAAAATTTAAGAATAGAGGGACAATTAAAATTCAAAAAACTATATTATTCCAATTATATGATGG # Right flank : AGATTTTATAGGGTTAATTTTGGTTTACAAATATAAAAAATGGAGGAAACCAAAATGAAAAAAATTTTTGTGATATTGACATTGGTATTTGTTAGTGCAAATACATTTTCGGAAACGTTGTATTTCAAGAATTGTAAGGAAGCACGCTCAAAAGGCTACAAAAATATAAAAAAAGGCGAGCCAGGATATGCAAAACATTTAGACAGGGATAAAGATGGTATAGCTTGTGAAAGTAAATAAATTAAATGTAGAGTTGTTTCTTGATTGGGATAACTCTTTTTTTGAAATTAGCAGATGATAGGAATGAAACAGATAAACTATTAAAGAAAAAAATTGAAAGGAACATTTTTATATATATTTTTGTAACAAATGTTTGACATCTATACAACAAAATATAAAAGAAATTAAATATTAAATTGACAAATTGAAAAAATTATGTTATTATACTTAAGGATTGTTAAATTAGTTATATAATGGGACTGTAGCTCAACTGGTCAGAG # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAGATCACCCCAATATCGAAGGGGACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 1532639-1533013 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNVZ01000005.1 Leptotrichia massiliensis strain Marseille-P3007T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 1532639 36 100.0 31 .................................... AATAAGAACTAACATTATCAAAGGACCTTAA 1532706 36 100.0 32 .................................... CCGAGAAAAATTTTTCTCTATTAAAATATTTT 1532774 36 100.0 32 .................................... TCAATATCTCTCTCCATGTAAGGAGCTAATTT 1532842 36 100.0 32 .................................... TCAACAACTCTACCATTATATTGTTTTATAAT 1532910 36 100.0 32 .................................... ACTAGGAATTCAATTTGACATCCTCGAGTCTT 1532978 36 83.3 0 ........C...............AA.T...G...T | ========== ====== ====== ====== ==================================== ================================ ================== 6 36 97.2 32 GATTTAGAGTACCCCAAAAATGAAGGGGACTAAAAC # Left flank : GAAATCAATAGTGGATATATTGAAAGAATATGGTTTTGTGGTAACATTTAAGATAGAAAAGGATAAAAAGATAAGAATAGAAAGTTTAAAATCAGAAGAAGTTGTACATTTGAAAAAACTGAAACTAAAAGATAATGATAAAAAGAAAGAACCGATAAAAACCTATAGAAATTCAAAAGAATTGTGTAAACTTGTGAAAGTTATGTTTGAGTATAAAATGAAAGAAAAAAAATCTGAAAACTAAAAAATGTAAAGTAATTTAGTTCAAAAAAGAAAATCATATCCGGAGAAATAAGTATCAGAGAAAAAATCATAAGAAAAGAAGCAAAAATTTTGGAATATTAGTTTGCATTATCAAAAAAATATGATAAAATAAATTAACGGGGTAATCTAAATCGCTAGAGTGTGTCTGGAAACTATTAAAATACATTTAATTTTTTCAGACACACTCTAAATAAACAAGTAAATAAAATATAAAATATTATCCCATAATTCGATGG # Right flank : TATATATAGGTTTCTAAATTTAATGTTGTCTAAGTTTGTTAACAAAATAAAAATATTGATTTTAATAAAGAGCTTTACAGCTCTTTTTTGTTTAACTTTTCAATAAAAAATTTTTTAAATAAGTATTTTTCCCGTATTTAATACGTGCTAAAATTGTTTTGTAATTTAGAAGTTGCACAATAAAAACAGATATAGAAGTTTATAAAAATTGATTTTTTAACTTTTTAGATGATTTTGGTATGCTTTTACAATTTTTTAGAAAAAATGTTATAATAATAATAAATCTTCAATTTAAGGAGAAAGAATATTATGAAAATTAGTTATAAAGGGATTGGCTCTGATTTAAAGAATATATTGTTTAAAGAGTTTGAAAAGAATGAAAATACGCTTTTTGTCTTTGAAAATATGGCTTCGTTTTTTGAGATAAAAAGGGAATTTTTACAGAATGAGGAAATACAGCAGGAATTAGGGATTTTTCAGAATTTTAAGATGATGAATAG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTAGAGTACCCCAAAAATGAAGGGGACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //