Array 1 1013309-1014132 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386488.1 Rikenella microfusus DSM 15922 RikmiDRAFT_RMD.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1013309 36 100.0 29 .................................... TCAGGAAGTTCGGAAGGATAACTCACACG 1013374 36 100.0 30 .................................... TTTCTGGCAATATTGTGTTTAACACCATTT 1013440 36 100.0 29 .................................... CGCGCTTCTGTAAGTACTCTTCTATCAAA 1013505 36 100.0 30 .................................... CATCCTTAGCCACGGAAGTACCATAGTTCT 1013571 36 100.0 29 .................................... CTGTTTGCGACGGGCAGAGGGGGACTGAT 1013636 36 100.0 31 .................................... TTCCGGGTCGTTGCAAGTGGCACCGTCGTTG 1013703 36 100.0 29 .................................... GAAAGAATCGCTGACGGCCCTGTATCACG 1013768 36 100.0 30 .................................... AATGCCGTCTGTGTATGAGTAACAGATTGT 1013834 36 100.0 30 .................................... TCGGACATACTGCGTCCCGTCGGCCCTATA 1013900 36 100.0 30 .................................... CAAAAATCCGAGAACCCTACGGAGGCAAAC 1013966 36 100.0 30 .................................... CAATCTCGTGAGTTTACTTTCGAAGCGAAG 1014032 36 100.0 29 .................................... GGTTTAATACGTACTATTGGTATTCCAGC 1014097 36 97.2 0 ......................C............. | ========== ====== ====== ====== ==================================== =============================== ================== 13 36 99.8 30 GTTGTGGTTTGATGTAGATTTTTAATAAGATACAAC # Left flank : AAAATTTCGTACCCTCTGCTGGAGTAACCCCATGCCGGAACTACGACTAAATGCCTATCGGATTATGTGGCTGTTCGTCTTTTTCGATCTGCCGACCAACACCAAAACGGAGCGGCGCCATGCGGCGCAATTCCGCAAGGCGTTGGAAAAAGACGGCTTTACGATGATGCAATACTCGGTATATGTCCGGCATTGCGCATCGAAAGAGAACATGCAGGTACATATCAAACGGGTGCGGCGTTCGACGCCTCCTTCGGGTTATACGAGTATCCTTGCCGTAACGGACAAACAATACGGCGACATCCTGAATTTCTGGGGCAAGACCGAGTGCGCCAAACCGGACATGCCACAGCAACTGGAACTTTTCTGAGAAATTGGTTAAATTTGTTCCTTGAAATAGAAAAACGCATCAAATCGGCTTCGCCGGCGTTTCCCGCTTTGGTTTTCACAGCCGAAGAAAGGCTATAAAGCACTAATTAACAACCCTTAACGGTCCCGGC # Right flank : CCGTCGATTCGGCTTGTGCGATACTGGAAGGTTGTGGTTTGATGTAGAATTTTGGATTATGCCGGAAACTTAGACGGCTCCGCAAAGCGTCCGACGGCAGGAAACTAAGCAAAAGCCGCGTCGAACTTTCGTTCAACGCGGCTCCATTGTGCCCAGGACAAGACTCGAACTTGCACGCCGTAAACCGGCACTACCCCCTCAAAGTAGCGTGTCTACCAATTTCACCACCTGGGCAATTCTATTTCAAGATTCCCTGTCGCCAAGGAAATTCGTTCCGCTCGAAAAAAACGTCCGACAATGCAACTCTCCATACCGCTCCCCCCTCAGCCGCACCGTCTTTACAAACTGGCCCGAACCCTGCTACCCTGCGGACAGCGGCACAAAGGTAACGCTTTTTCGGTTCCGTGCAAACCCATTCCTCAAAAAAAACAGAAAAACCCGCCACAGACCGCCTCCCCACACACCGAAACCGGGAAAAATACCTAAATTTGCAATTCATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGATTTTTAATAAGATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //