Array 1 18-620 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKV01000020.1 Bacteroides salyersiae strain BIOML-A35 scaffold20_size57744, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 18 35 100.0 37 ................................... AAAAGTATGAAGACAATGAGAAATTTCGCAGCTGCGA 90 35 100.0 35 ................................... ACAGTAGCCATCAACATAGATCACTTAGTAAGTGT 160 35 100.0 33 ................................... GATTATAGGCTCTGTCAATGAGGATCCATCACT 228 35 100.0 35 ................................... AACAGCGTTCGAAATATTGCGCCTTTCCACACTGT 298 35 100.0 37 ................................... AAATCTCTTGAAAGAATACATTGACATATGTCTAAGA 370 35 100.0 37 ................................... TATATTTATAACCGCTGCAGAAGCATTTGCCAAACGA 442 35 100.0 36 ................................... TCACCTATTATGATGTTTGCTTTCGTGGCTTAAATT 513 35 100.0 38 ................................... TTATTTATTATTTGTATGGTAATTTCTGCTTTTGCCAA 586 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ====================================== ================== 9 35 100.0 36 GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Left flank : CTATCGAGTATAATAGTG # Right flank : TACTCTGATTATCAATAATTTATTTTTTACTCTTTGTTTTGTATATTTCTCATAAAGTATTGTTATTTAATACAATACGCTATATTCCAATAACTTTTTCGCAAATGTATGTATTATTTTTAAGAAAATCAATAATTTGTTTGGCTAATATAGGCTTATCTGCTTAAAAATAAGATATTTACATTGAATATCTATTTTCGCAAATGATTTTGATTTTCTTTAAAAAAAATCATTTTCGAAAAACAGCATAGAGGTATTATACAATATATTATTGATTATAAATGCAATACGTCAAAGATCACTTGTATAGTAATGATTCATTTTCGCAAATGATTTACTTTGTTGCTAACATGTATTTTGTTGCGAATGTGATTTAAGTAATACAATTTATCTAAAAAATATAATATCAAATAAATCAGATAATTATCTTTTTATCGTTTTTCGCAAGAGTTTGGCCTTTTTTCATGTTTTGTTCACTTCATCTCACCACTTGGCTACAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 18162-18387 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKV01000079.1 Bacteroides salyersiae strain BIOML-A35 scaffold79_size22106, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 18162 30 100.0 35 .............................. TACAGCAGCGCTGGGTTTAGTCCTGCTGCTTCAAG 18227 30 100.0 35 .............................. AGGAAAAATTCACAAGACACAGAGCCTACAAACTC 18292 30 100.0 36 .............................. GTTGATCCGCTATTGTTTTTAGATATAGTCATACTC 18358 30 73.3 0 .T...............A......AATTTG | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 93.3 36 GGCTTAATTGTACCGTTGTGGAATTGAAAC # Left flank : GTGAAGCAGAAGTAAAAGAAGGGAAACGTCATGGACGTTATCGCGAATATTATGAAAATGGAAAACTGAAACTTCGCGGGAAATATGCCAATAACTTACCTAAAGGTACATGGAAGTATTATACGGACGAGGGAGAGTTTGAACGCAAAGAGAAATATTAATTGTTATATTGGGTTTTGATATAGTTTTATTAAATAGAAAGCCTCTGATTGATCAGATGAAAATGTATGCTTATGTATTACTTATTTTTTTCTTAAGAAATAAAATTATGTCAGAATTTTATTTGTAATTTAGTTGTCGATAATCGTTTGTATAGTCTGATTAATCTGGATTGATATATAAATTTTTCTTTGAAATGTTGATATACAGTGAAATAGCTATTGTGTCGATGTTCCATGCTTTTTATACGATTAGCCATCGACATAATTGATGTTATAAAATGGTGTTTTTATTGGATAACTTGCTTATTATTAGATATCTTTTTTGAATATTTAATGTGG # Right flank : GAGATTATCCTTATGTGTAATCTTTTGCTATCTATGTTACTACTTTTTTATTTGTTAAAAAATACAAGAAGAAAACGCGCAATTATATTCTTTTATATCATTTAACATCAGATAATTAACCTAATTTCTATTTTTGAGACCCCAATTCGACAATTCATATTTAATTATTAACCTATATATTTTATATGACTATGCGAACTAATTATTTATTATTTTTAGTAATCATGTTGGGAATATTTCCCTTGAGTCACACACAAGCATCCGATTCTATTTCAAACAATGTAGTACTTTATTCTCCTTACACGAAAATCTCAGTATCGCCCGGAGAAAGTATTAACTACAGTATCGATTTAATAAATAATGGTAGTGAGATTTATAATGAGAATATCTCATTGAGTGGATTGCCGTCCAGTTGGAAATACGATATAAAATCCGGTAGTTGGAATATCAAACAATTAGCTGTACTGCCCAATGAAAAAAAGAATTTCAGTTTAACGGTG # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 1191-9 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKV01000168.1 Bacteroides salyersiae strain BIOML-A35 scaffold168_size8008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================================= ================== 1190 35 100.0 34 ................................... ATTGTTGATCATTTGAGTGAGGAATTGTCTGCAT 1121 35 100.0 40 ................................... GCTTTAATTGGTGCATTTGTCGGCGTTTGCTGCAATGTAT 1046 35 100.0 38 ................................... GCAATAGTAAGTGTTTTTGTCTTCTGTGCTCTCTTTCT 973 35 100.0 34 ................................... AAGTATATCTTTGCCCGGGCTCGTGAAAGCTTTG 904 35 100.0 39 ................................... AAAACTTTATACAAAGTGGGAAAGTGTAGGATGTATAGA 830 35 100.0 35 ................................... ACAAAACGTTCAAAATTCTAAATAACGACCACCAT 760 35 100.0 55 ................................... CTAAAGCAGAAATGCTGATAAAGGGAAATACCCAGCTGTCAAAGAGTCTTAATCN 670 35 100.0 36 ................................... ATAACTGGAGCACCAGAAGAAGGCATTGACCAAACA 599 35 100.0 36 ................................... CTTCTATGGCGACCCCAAGTACAACGGTACCAAGGT 528 35 100.0 37 ................................... AATACCTCGCGAAGGTAGCTCTGTTCATCCATGAGGA 456 35 100.0 34 ................................... TATGAGCATTTTGCCACGCCGCAAAGGTATAAAA 387 35 100.0 33 ................................... ACTGTTCTCATGATTATAGCGATGCCTTTGCAT 319 35 100.0 33 ................................... CATCAAAGAAAACATATTGCATCTATCAAAGGA 251 35 100.0 37 ................................... CTCAAGAGTATAAAGCTCGTGAGGTTCACTCCAGCGA 179 35 100.0 32 ................................... GAAAGACAATGCCAAACTTGCTATATTTGCAA 112 35 100.0 34 ................................... ATTGTGGTTACATTCCTGCGATGATGAATTTGGG 43 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================================= ================== 17 35 100.0 37 GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Left flank : GTGCCGGTTGATATATGATTTTTGTATAACAATTGACGCAAATCGGATAGTATATGACTGTATCGGAGCGTTTATCCAATATTTTTTTTATTTTCTCTTGCACTTGTAATAGTTGGATATCGGTAAACATACATTCGAATACACTGAAATTGACTCTTATTCCATATTTTTCCAGAATTTTAGAGACGCGTGCTCTTTTCCGGTCTTCTTTAATATCGTATGCTACGACACAGAATGTCTTTTTTGCTCTTGCCATTTGGTGTTGCGTATTTGGAGGTAAATATAATGAAAATGCGGGATATGTGGTATTGGAAAAGAAAAATTTTGAGGTTAAAATGGGGTAATATTATTAGAGTGAATTAAAGGTGTATGGATGTATCATTGTTTCTGAATTCGGGATAATGAGATATAAATGATTTTAGAGAGTTGCTTGTCTTAATATTCTACTGGAAGTAACTCAAATACGGGATCTGGGTTGTGACATGGCGTAACGGAGAAAA # Right flank : TACATCAGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 3828-4176 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKV01000087.1 Bacteroides salyersiae strain BIOML-A35 scaffold87_size20925, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== =================================== ================== 3828 42 100.0 34 .......................................... CAACCATTGACGGTGTGGATGGTTTACCTGAGGA 3904 42 100.0 35 .......................................... CAACGATATATAAGCATTTTGGCGTTAAACTTCCA 3981 42 95.2 35 .............................A..G......... TAGCAAAATCACATCATCAATTTCTTCTTCCAAAG 4058 42 81.0 35 T....CT.G..A...A....A...........G......... CAACAAATACTTTTTCGATATTATGATCGGCAAAG 4135 42 83.3 0 ......TCG....C................A....T....T. | ========== ====== ====== ====== ========================================== =================================== ================== 5 42 91.9 35 CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Left flank : ACTGGCCCAGCAGAATACATCCTTTTCTCCTTGTATGTTGGGACCCGCACCTTTGGTATAATCCCAAACTTCAAGTACCAGATCAAAGAAAGGTTGTGGGGGCGTGTCCTGTGCCTTACAGAAAGAAGAGATAAGTAACGCTGTCATTAGTAGTAAATAATTTTTCTTCATACCATGTGTTTTTTAAGTTTATGATCTTTAATTTTTTTTGGAGCAATACAGATCGGGACTTCGTCTTTAAAGAGATGCTTTCTCTATATTACTTTATTATAAAGCGGATGAGAAGAAAAAAACCACTAATCTTTTTCCAATAATAATTTAGTTTGGGATTTAATTTAGCAAAAAAAGTACAAGATATTGATGCTCTTGGTAGTAATTAGAACTCTTTTTAAATTAAAAATCCCATTAACTAATGGGATTTTCTTGAAGAAACAGCATTTATTTTTATTTTCTAAATTTTATTGTAATCTTTTGAATTACAGTTTGTTGTTGGCATTGTA # Right flank : ACAACTAAAAAATGGTGGTTATTAAAATAATATTTGTAATTTTGTAGTCCTAACCCTGTGGGGGAGTGAGACTTTAGCGGGTTATGTGATATTTGTATCGTTTAGCCGCTAATTTGTTTTCATACTTTTCCTAAAGCAAACTGCTGTCGTTGCTGAGGATAATCACGATTGTGTAGAGAGAGAATTCTAACTTAGTGCAAATGGAATTTGATATGAACTCAATGAAACATATTTGATTGATATATTGGTAAATAACCATTGTTAAAAAAAAGTGTTCATTAATGAATTGGGGCGTAAATTATAACATTTTACATCTTACTTATCTATCTTCCTTTTTTAACATTGTTAATTGCATTTCTCATATATACTTTCCTGCTTAACAAGAAGCGTATTTCTTGTATATAAAGAACGTATCCTTTGTCGACAAGAAATACGATTTAACGCAGCGTTAACATGGCTTTCTTTCGTGTATAAACAACGGCTCTTTGATCTCAGGAAAT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 620-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKV01000174.1 Bacteroides salyersiae strain BIOML-A35 scaffold174_size6849, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 619 30 100.0 35 .............................. ATTGGGAGAAAGATTTTTTAACCACTGCCGTTCAG 554 30 100.0 35 .............................. TGTTTAATATTTATATGTTATGAAAGAAAAAAAAA 489 30 100.0 35 .............................. AAGCTAATCAAGCCGTGGGATCGCAACACGGGAGA 424 30 100.0 35 .............................. AGTGGAGGATCACCACAAGCGATAAAATCACAAAT 359 30 100.0 37 .............................. ACAAAATCGCGGTAATCCTTCCACAAGGCACGCAAAG 292 30 100.0 37 .............................. GAGTAGACACACAACTCGCACAATCATTGATCGACCT 225 30 100.0 34 .............................. TGGAAGTCAATCAAAAAGCGATCAGCGCAAAAAG 161 30 100.0 34 .............................. AATATGAACGCAGGCTTCAAAAACAAAGAAGGGG 97 30 100.0 35 .............................. TGGCTGCTTGTGCAATGTCCCATCTGTCTGTTCGG 32 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 100.0 35 GTATTAATTGTACCGTTGTGGAATTGAAAC # Left flank : CCTTTAAAATGTATTGGTAAAATATGTATGTCATTTTGGTTTATGATTTTGGCGAAAGACGAGTTGCAAAGATGCTGAAGCTATGTCGTAAGTATTTGAATTGGATACAAAATTCCGTATTTGAGGGGGAAATATCAGAAGTACGATTAAAGGAAATGTTATCTGCTGCAAAGGCTTTCATGAAGGAAGATGAAGATAGTATTATTGTTTTTAAAGGTTCCTCACAATGTTCTTTGGAGAAGAAAATTATCGGGAAAGAACGGTGTAGTATCGACAATTTTTTATAATTTAGTTGTCGATAATTGTTTTTATTGTCTTTGCAATAAGGCTCTACGTTGTAGATCGTTCTTTGACGTGTTGATATACAGTGAAATAGCTGCTATGTCGATGTCCGGCATTTTTTATGTTATTATCCATCGACATAATTAATCATATAAAAAGCATATTTGTTATTTGCTAACTCACTCATTTTTAATTGTTTTTTTTGAGTGTTTGTTAGA # Right flank : CAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA //