Array 1 234916-235345 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHMHN010000004.1 Staphylococcus haemolyticus strain A11 NODE_4_length_278323_cov_13.4692, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    234916	    36	 100.0	    30	....................................	ACGAATAACACAATATATAGTATTAACAGC	
    234982	    36	 100.0	    30	....................................	GTTAGCACCATTGTTTTTATGGGTAGCGCA	
    235048	    36	 100.0	    30	....................................	AATTTGCGAAACGATATTGTGACAATCAAT	
    235114	    36	 100.0	    30	....................................	ACAGAAATATTTATGAAATACTTTTTAACT	
    235180	    36	 100.0	    29	....................................	TTAGCATCATCATTCATCTTTTTAGTTAC 	
    235245	    35	  94.4	    30	.................-..........C.......	GTTTTTTTAGGGGACATAGGGGGGTGACTG	
    235310	    36	  72.2	     0	T................C......C.C..A.ATTTA	|                             	
==========	======	======	======	====================================	==============================	==================
         7	    36	  95.2	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC	                              	       

# Left flank :   CGATACAAATATAATTGTATTAACAGGATCATTACATTTTCTATCTGAAGAGTGGAAATACAATAACTATATTAGAGATGGGAAACAAAAAAACACATCTGAATTTCTAGAAGAATTAGAGTGGAACGCGCCACTTGATTTTGATAAGAAGGATCTAGAAGAAAGTTTGAACCGATTCATTTTAACTTATCAAGATAAATTAGAATTATATCCCATAATATCAAACTATCAAATAGCACAAATTATGTTATTTAATGCCATAGATATATATGTTGGGATTTCATATATGCAACATTGTAATCATAAATTTAAATTAAAAATCAAAAGTGAATTGCTGCCTAAAAGCATCAATAAATATTTAAATCAACAATTGCTGAATTAATTACTTTGCTATAATTAACTTAATAAATTATTATTATCTTAGTGAAGGAGTTTAGCTAACTTGTTCACTAAGATACCTTTTTTTGAACTAATTCTTTTAGCGAGTAATATTGCTAGAG
# Right flank :  AAATTAATGATTACTAAGTGCTGTTACTTGCTTACTTTTATTATCATGATCAATCAATTGATCAAAAGTATAGAAATATTTAAATTTAATAAAAATATTAGTTGACTAAGCATCCATGATAGCAATATAATTAATTTATAGAACAAGTTTAGCTAACTTGTACTTATACCTAAAATTACAGAATCTACTAAAACAAGACTTTATGTCGTGTTTATCCCATTAATTTATTAATGGGATTTTTTCTTTTTAATTAGACAAATCGCCAACGATGATGACTATCGTTGGCGATTATTTTTGTTTAATGTCATTTAATTACACATTATCATCAGTAATTTGACCAATCCAATAACTAGCTGCAAATCCAATGATTAAAGTGATGATTGAAAGTGTCCACTCGATACCAGTTTGAGGAAGACCAGGGAATACAGCATATATGGAGCCAATTACGAATCCAGTTATTAATGCGAATGTGGTATAGAAGTGATGATGTAGGAAGTATT

# Questionable array : NO	 Score: 6.02
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.60,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//