Array 1 18247-19617 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATAR01000089.1 Pseudomonas stutzeri MF28 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 18247 29 100.0 32 ............................. CAGTTCTCGCACACCACTCCCGCGACCTTGCC 18308 29 100.0 32 ............................. CCCAGGAACAACTGGCTGCAGCGCGTACTGAT 18369 29 100.0 32 ............................. TAATGCACGTCCATGCCGCCCTCTGTGCCTTC 18430 29 100.0 32 ............................. TTATGGCCGACCTCGTGGGAGTGAGCCAGCAT 18491 29 100.0 32 ............................. GCCTGGCAGGGAAACCCTCCAGATACGAGGTC 18552 29 100.0 32 ............................. TTTTTCTGCTGCGCCCATCTCTCACTCCCTCC 18613 29 100.0 32 ............................. CCGCCACTCAGTCCGGGCACGGCGCGCTGCTG 18674 29 100.0 32 ............................. CCATCTTGAGCAATTCAGGCCAGACCCTACGG 18735 29 100.0 32 ............................. ACAGGAATCAGCGAACCGCGTAGAGGGTTCAC 18796 29 100.0 32 ............................. CTTTGCTACCAGCACTAACCCGCCCCGCGCAG 18857 29 96.6 32 ..............A.............. CTGGGGCGGTTCAAGAAGGTCGGCGAATTCGA 18918 29 93.1 33 ............T.A.............. ATTCAGCGCGAGTTCGCCCGCATCATCGATGGC 18980 29 96.6 32 ..............A.............. TTCGACGCCGAGGTGTTGAACCCGCGTACTGA 19041 29 96.6 32 ..............A.............. GATGTGTGGGACCGAGAGAAGAAGCGGCGCAT 19102 29 96.6 32 ..............A.............. CACATGGGGATCTCCTGGCGCTCCAGCAGGGC 19163 29 96.6 32 ..............A.............. CATCCGAAGTTGGATGCCGTGGCCTTTCCTGT 19224 29 96.6 32 ..............A.............. GTGCTGCAAGAAATCGTGCAGGAGAGCTACCA 19285 29 93.1 32 ..............A..........G... CACGCGGTGGTTCACCGCATCGACAAGAAACC 19346 29 93.1 33 ..............AA............. GCGAGGGCCGAGGAGGGTCAGCGCAAGGCGACC 19408 29 96.6 30 ..............A.............. GACCCCGTCAGCCCCGGACGTGCAATCAAA 19467 29 86.2 32 CG............A.....A........ CCGAACAGGTCGGCCACACAGGGGGTGCCTTT 19528 29 93.1 32 .............TG.............. ATTCGCTTCGAGGTTGACCACGGCGACGGCAA 19589 29 86.2 0 .C.........C.T..........T.... | ========== ====== ====== ====== ============================= ================================= ================== 23 29 96.6 32 GTGTTCCCCGCGCCCGCGGGGATGAACCG # Left flank : GGACGTATCATCCCGCTGATCGAGGAAGTGCTCGCTGCCGGCGGCATCAATCCGCCCGAGGCACCGCCTGAATCCGTCCCGCCCGCCATTCCCAACCCGGACAGCCATGGCGAAGCCGGCCACAGGGCAAAGTAGATGACCTTTCTCGTCGTCGTAACCGAAAGCGTGCCACCGCGCCTACGCGGGCGGCTGGCCATCTGGCTGCTGGAAGTGCGGGCAGGTGTCTACATCGGAGATGTTTCGAAGCGCACCCGCGAAATGATATGGCAGCACCTCGAAGCCGGCTTCGAGGACGGCAATGTCGTCATGGCCTGGGCCAGCAAGAGCGAATCCGGTTATGACTTTCAGACCCTCGGGGCCAACCGCCGCGAACCCATCGACCATGACGGCCTAAGATTGGTTGCATTTCTGCCATCACCGGCGCCCGATCTTTAACAAAAAAAATTGGTAGATTTTTTGTAGCCGATTTTCTTCTTGCAAGACAATCGGTTACGTTTGGT # Right flank : GCGCAACATGCTCGAGAGGACCTTTATCCCTCACACGCTCCCCTTAGGGTGGGCCATCACCAACGGGAACAGGCCAGTAACTACGGAACCAAGAGCGCTCCAACTTCCGCAAGGCTCGCTCTCTTTGCTGGCGACCGTTGCGTTTAGATGAAGAGATTTAAGAGTGAGCCCCGAGAACATCCGTCAACACCCGCCGATCGATATTGCCGCCGCTGAGCACCACCGCGATCCGCTCGCCCTGGTTGGCGTCGCGTTCCTGCATCGCCGCGGCCAGCGCGGCGGCGCCGGCGCCTTCGGCGAGGTTGTGGGTGTCTTCGTGCAGGGCACGTATGGCCTGGCGAATCTCTTCGTCGCTGACGCGCACGACTCGCGCCGCTCCTTGGCGGATGATCTCCAGCGCTTCGGGCGCGGGCATCCGGCAGGCCATGCCGTCGGCGAAGGTGTCTGCCGTTTCGGTGGTGACGATGCGGCCCTGCTCGAAGCTCTGGGCATAGGCGTCC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCCGCGGGGATGAACCG # Alternate repeat : GTGTTCCCCGCGCCAGCGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //