Array 1 1871808-1867327 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP014836.1 Candidatus Nitrosoglobus terrae strain TAO100 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1871807 28 100.0 33 ............................ AGGTGGTTATTTAAGCAAACCAATTCCGGACAA 1871746 28 100.0 33 ............................ TCGAGGAAGAAGATCGGACTGCTGTTGCCAAGG 1871685 28 100.0 33 ............................ TTTAGGGTTCCTGTAACACCATTCATTTAACTG 1871624 28 100.0 33 ............................ TATCGCTGGACTGGGTTTTGACAGCAGTCATTG 1871563 28 100.0 33 ............................ TCAATAAAAAACAAACGGTTCTAGAGGAAGCTA 1871502 28 100.0 33 ............................ TCAGATGAAATCATAACCCCGTTTTTATCTTCA 1871441 28 100.0 33 ............................ TCCATTGTCACACCTTGCTCGCTAGTTCTTTAA 1871380 28 100.0 33 ............................ CAATATACTTTTTCATATAATGAGAACATCTAG 1871319 28 100.0 33 ............................ CATTTATCTAGTTAGCGAATTGACGCTTACTTT 1871258 28 100.0 33 ............................ TAGAGCTGGTAGATATAGCCCTGTGCTTTTCAA 1871197 28 100.0 33 ............................ TTTATTTTTAGCGCTGCTCATGACTTTTTTATA 1871136 28 100.0 33 ............................ TAGGTGCTGGTGCGATGATGCGGGGGATGATGC 1871075 28 100.0 33 ............................ TCATGATTTATTTTAGCGCCCTTCCTGACTTTT 1871014 28 100.0 33 ............................ CAAGATAGCTAGGTTCCTTCCATTAAAGTACTG 1870953 28 100.0 33 ............................ ATCATCCCCGCGGATAACCATTATTATCAGGAT 1870892 28 100.0 33 ............................ TGTCTTTAGCGCCGTCTTCCCATGTTCCATCAA 1870831 28 100.0 33 ............................ TGTATATTATGTTAAATAGCTATCTTGATGATG 1870770 28 100.0 33 ............................ TGAAAAGCCCCGGGTCAGTTCTGGATAAACGCG 1870709 28 100.0 33 ............................ CCCCGGGGTCTATAAGTTTTACTCCGCGCTGCG 1870648 28 100.0 33 ............................ TGGCCGGCTCTTTTATTTCCTCTGAAACTTGGG 1870587 28 100.0 33 ............................ TCGCTAAAGCATGCAAAGACATCTACGATTTGA 1870526 28 100.0 33 ............................ TTTTTGTATGCTCATTTTTTGTACTCCTGTTTT 1870465 28 100.0 33 ............................ TCCCCTTTATTATTACTTTTTCTATCGTATGCT 1870404 28 100.0 33 ............................ TAAGGTTTCAGGGCGCGTTGAAGGGGCACGGCT 1870343 28 100.0 33 ............................ CCTCACTCCACGCCCATATCGGGCACATGGAAC 1870282 28 100.0 33 ............................ CGTCTACGTGGGCACCTCTACCGGAAAAGAGGA 1870221 28 100.0 33 ............................ CTCTTTTAGGCTCCAGCTCTTATCTAGTGCAAA 1870160 28 100.0 33 ............................ TATGGGTTCTGAGGCTTCTAGGATAGGTAGCGT 1870099 28 100.0 33 ............................ TCGTGGATGTTTTTGCATGCTTTAGCGATTTTG 1870038 28 100.0 33 ............................ TGCTTTTTTTCAGTTCTGTGATGCGTTCCAAGC 1869977 28 100.0 33 ............................ TTTCTCCATAGCCTGTCTTACTGCATCACCTCT 1869916 28 100.0 33 ............................ TCTCTCTTACTTCATCTCTAGTCACGTCGCTTA 1869855 28 100.0 33 ............................ CACGAAAGGATGGCGGGTTAGAGAACCGGCTCC 1869794 28 100.0 33 ............................ CTTCTTTGTAAATGTAATGTTTCATGTGTACAA 1869733 28 100.0 33 ............................ TTCTCAGCTTTTTTGTGAAGTGAAAGTAGGCGA 1869672 28 100.0 33 ............................ TTTTACTCGTCTAACCATTTTGTTTCTCCTTGT 1869611 28 100.0 33 ............................ TTACAGGTTTTGTCTGAATAATTGGGATGTAGC 1869550 28 100.0 33 ............................ TGGTTCTCATCTAGAAAAGGCAGACACTCATGG 1869489 28 100.0 33 ............................ TATCATCGTATATTTTAGCCACCCCCCAAACTT 1869428 28 100.0 33 ............................ CGGGTTTAGGGTTATCTTTTACATACTCTAAAA 1869367 28 100.0 33 ............................ TCAGGCAAATCTTCCCAGAATCCGTTCCCTAGG 1869306 28 100.0 33 ............................ TGTTCTAGCATGGAGCGACTGGAGCGCTTGGAA 1869245 28 100.0 33 ............................ TACCCGATATACCCCTTAAACCTCACTCCGCGC 1869184 28 100.0 33 ............................ TAAAGTTATCTTACTTGGAACTCTAGGGAAAGA 1869123 28 100.0 33 ............................ TCCTGAGGGATGCAAGTAAAATATGAGATTTCT 1869062 28 100.0 33 ............................ TCCTGAGGGATGCAAGTAAAATATGAGATTTCT 1869001 28 100.0 33 ............................ TAAAGAAACGATAGTCTCAGTGTCTTATGATAG 1868940 28 100.0 33 ............................ TTTAGTTTCTTCAAGCGATGACAGTCACACAGT 1868879 28 100.0 33 ............................ CTTTATATTACTGTAGCTAGTATCGTAAGATAA 1868818 28 100.0 33 ............................ TGTAGTAAAAACGTTTTTTAAAGATATCCTGCA 1868757 28 100.0 33 ............................ TCAGACGCTTCATTAAGCACTACAAGGATGGTG 1868696 28 100.0 33 ............................ CACGTAAAACTATCGTACGACACTGAGACTATC 1868635 28 100.0 33 ............................ CTTTTTGTTGATACACATCTTATATAGTCTTTT 1868574 28 100.0 33 ............................ TGCACCTATATTAAAACGAGCTTTTCATACATT 1868513 28 100.0 33 ............................ CTTTTCTGTGAAGTAAAGGTAGGTGACTTGAAT 1868452 28 100.0 33 ............................ TAAAGTTTTTAATTTTTGTACGCTCATTTTTTT 1868391 28 100.0 33 ............................ TGGCACGCGATTAGGCTTTTCGGTAAATATGCC 1868330 28 100.0 33 ............................ TTGGTCGCTTTCACTGACTTGGTACAGAGCCGG 1868269 28 100.0 33 ............................ TTCCCAGCTTTTTTGCGAAGTGAAAATCGGCGA 1868208 28 100.0 33 ............................ TGATTAGCGACGGCGTTACTTATAAGACAACGA 1868147 28 100.0 33 ............................ TGCCGCGTAATCGAGATGAGCTAGAACTAGAAA 1868086 28 100.0 33 ............................ TTTGTCTTTACTTTTAAAGACGGTCACGGCTAG 1868025 28 100.0 33 ............................ TAAATCGGAGTGATAATGAGAACGTTTAATGTT 1867964 28 100.0 33 ............................ TTTGAAATATTCCTAAAAACCTTTTCGCTAAGA 1867903 28 100.0 33 ............................ TATAGTAAGAAATATAGCAGCGGCCTCCGGTAT 1867842 28 100.0 33 ............................ CCCTTATTCTCTAGAGTTTGAGCGCTGCATATC 1867781 28 100.0 33 ............................ TGAGATCATACTCAGCCCTCGACTTTATCTTTG 1867720 28 100.0 33 ............................ CGGCGGATGGATATGCAGCTGTTCCCCGAACGG 1867659 28 100.0 33 ............................ TATATAGAAAGCTCGTTTTACTATAGATACATT 1867598 28 100.0 33 ............................ CTCCACCGCCAGACGTGCTTATGGACAGCTCCG 1867537 28 100.0 33 ............................ CGGGGGTCTTGTCATAAAAATCGCTTCTCGACG 1867476 28 100.0 33 ............................ TCTTTCATGTGTGTAGTCCTTGCTTGTATGAAT 1867415 28 100.0 33 ............................ CCCCGTTGCCATCCCCCTCATTCTCACGGATGC 1867354 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 74 28 100.0 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : TTATGACAAACATAAAGTATCTGCGAGATTTCGGGAACGGGTGATTGAGATGGATCTATTGGCCAGAGTAGGGGCAGATGTGACTGCTATACTGGGGAGTGGACGTGCTAATCGTTATTGCAAATGACTTACCGCCTGCGGTGCGTGGGCGGATGAAATTATGGTTTATTGAGCCTCGGCCTAATGTATTTGTCTCGGGTATCAAAGATTCGGTCGCCACTACAGTGGTGGATTATCTGTACAAACACTGCCCGGTAGAATCCGGTGTGCTGCTTGTCCGTTCGATTCCCCGCTCACCGGGTTTTGAGATCAGAACCATTGGCCCACCCCGTAAACCTACGATCACCCTTTCGGGTCTTCAATTGATTGTGGAAACCTTGAAAGAGGTAAATTAACTCTATTAGGAGGCTATCGATCACCAAAGTTCTTTAACAAAATATTAAATTTTCTGTACCCGTTAAGGGCTTCATAATGATGCAGAAATCCCTTAGAATCTCAGT # Right flank : TCAGGTGTTCTGATCGTGTGGCGAGGAGAACCAAGCCTCAATTTGATCTTTAGGGAACTCCCGCCAAGGAAGCTTGCGGTTAAGGGTTGATGTATGCTGATAAAAATGTTCTAGATCCCGAAGGAGAGCGTTCATTTCAGGTAGGGAAAGGGGAGGCGTTGATGGCGCTAGGTGCGAGCCTATCAGGTTAATAATCCCTTCTCTAATGAAAGCTAGCTCAAGGGGTTTTTGTGGCTGTGTAGTTAATTGAAGCAGCAATGCGTGCAGGAATGATTTAAAGTTAAGCCCTTTAAGTTGGGTAGGGGCTTCTCGGAGAATTAAAAGCTCAGGGCCTAGTCGGTATAACCCAAACCCTAATTCCAGTAACTTGGAGCCGTGTAGCTCTACCCATTCTGCTTGGCTAGCTAGAACGTTGAGAGTGAGGGGAAAAAGTAATGGTTGTTGTGTGATATTGTCATTAGCATAGGCTATTTGTAGGCGTGTCTGAGTTAGATGGGCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //