Array 1 231879-233535 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRUO01000001.1 Bacteroides caccae strain AF24-29LB AF24-29LB.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 231879 47 74.5 30 TAAA..CC.ATA..A......G....T.................... AGAAAGGAAGAATTTTACAGGAAATGCACT 231956 47 97.9 30 ..............C................................ ATAACAAGAACGGGGAAAGTGATAAGGCCG 232033 47 100.0 29 ............................................... AAATTTTATTACCAACAGTGCGAGAAAAT 232109 47 100.0 30 ............................................... CCTAGCTCCTAAAATAGGATATGATCTTAT 232186 47 100.0 29 ............................................... TCGGACGCGTGTTAAGTACTCCTCCTGGC 232262 47 100.0 30 ............................................... TTATCGTAGGCCTCCAATTTGTACAGACCG 232339 47 100.0 30 ............................................... TTCGGAGCATTCCAGACCGGACATAAGCCC 232416 47 100.0 30 ............................................... CTACCGCAAAGATGAAAAGAACGTAGTGTT 232493 47 100.0 30 ............................................... TTCCAAATCTACACCCATAAGGATGAAGGC 232570 47 100.0 29 ............................................... TGATTTATGAGGCTTATTTTGCAATTCTT 232646 47 100.0 30 ............................................... GTAGAAGAATTAGTTAATGGAGCCTGCATG 232723 47 100.0 30 ............................................... TAGATCCCTCACGAATAGAGATAGAATCAG 232800 47 100.0 30 ............................................... CACCTGATATAACAGAACCTACACCACCCA 232877 47 100.0 30 ............................................... ACCTTCGGCATCTTATATCTATGGCTTTGT 232954 47 100.0 30 ............................................... CCGAACGTCTAGGGTGATTGCGAACATCCT 233031 47 100.0 29 ............................................... GACTCATTGCAGTCTAGATGTATCTGATA 233107 47 100.0 29 ............................................... TCGTAGAATTAAGAGCCTCACGCCACGGT 233183 47 100.0 30 ............................................... CAGCACAGAGAAGATCCTCTGCAAGAAAAA 233260 47 100.0 29 ............................................... TAAATAACCCATAGTAAAATCAACAGTAG 233336 47 100.0 30 ............................................... GCATTACGCCACAAAAGATGCAGAGGAACC 233413 47 100.0 29 ............................................... CCGCGCATGCTTGATAATACAACCGACTA 233489 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 22 47 98.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Left flank : GCTTCGCACCTCTTTACTCTTTGAAAGAGCAAATCATGCAGAGTGACAACAGTCTGATTCAACAGACAGTGGGTACCGCTTTTGATATGTGGCAGAAATTCGCGTTCACTATCGTATTGATTTCCTCCTTCATCCTACTGTATCAGAAAGCTAAGTTTCAAAAAGCTGTTTCCAGCCTCCGCTTTTACGGCAAGATGAGTCTGACAAACTATATTTCCCAATCTGTTCTGGGTGCCATTATCTATTTCCCATTCGGATTTTATCTGGCTCCTTACTGCGGATATACTCTAAGCTTGATTATAGGTATTGTTCTTTGTATCTTACAGGTTCAGTTCTGTAAATGGTGGCTGTCCGGACATAAACAGGGACCATTGGAGACGATATGGCATAAATGGACTTGGATAGGGAGCAAATAATGCAAAAATGTATGAATTGAATAATTTGAGCTATAGAACAACATATTATGGGATTTATACGGGACAATTAGGTTTTGTTCTGTA # Right flank : CACAATCGCCATTAGCCGCTGTATTTCAATAAGTTAGATCACAATATAGAAAAAGAAAATGAGCTGTAAATTCATTAAAAAATCCCGTAGTCTTACGGGATTTTTTATTCAAAATAACTCTAATTGTTGTCCTGGTGTATTAACAGATAATATTTTCTTCCCATAAAAGAGTTCAATATTCTCAAATTGCTTATCAGTTATGCACATTATTCCAACCTGACCATATTCTGGCAAAAATGATTTTATTCTTTTTATATGAACCTCAGCATTCTCACTACTTGCACAATGACGAACATAAATAGAAAATTGAAACATAGTAAAACCATCTTTCTGTAAATTCTTTCTAAAATCGATATAAGCCTTTTTATCTTTTTTAGTTTCTGTTGGCAAGTCAAAAAGCACTAATATCCACATAATACGATATTCACTAAAACGATCCATTACTTCTCAGGATAAATAATACGACGAAGCTCTCCAGTAAAACATTTATAAAGTGAAGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //